Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1604 ATGAACTTAGATACTGCCGAGGATGATCCGGCCAGAGAAATTCACATCCCAGCTGAAATAGACTGGCATATGCTTGATAAGTCCAAATTCTTTTTCCTAGGCGCCGGCTTATTTTCTGGTGTATCAACTGCGCTTTATCCAATCATCGTATTGAAAACCCGGCAACAGGTTTCACCCACCAAAATTTCTTGCCTCAAACTATCCCACACCATTTTTCACCACGAAGGGTTTAGAGGATTCTACAGAGGTTATGGTACATCCTTAATGGGAACAATCCCGGCTCGAGCCCTTTACATGGGAGCTCTCGAAATCACGAAAAGTAATGTTGGAAGTTTAGCTATGGGGCTAGGGTTTTCAGAAACCACAGCCATGACTATAGCTAACGGAGCAGCTGGGGTGAGTTCAGCCATGGCTGCTCAATTGGTTTGGACTCCAATAGATATAGTGAGCCAGAGACTAATGGTTCAAGGTTGCAACAATGGTTCAAAAGACATGGTTCCAAATCTCAATAACTCCTTGAGATATAGAAATGGGATTGATGCGTTTCAGAAAATTGTATATTCAGATGGATTGAGAGGATTGTATCGAGGATTTGGGATCTCTATATTGACTTATGCCCCATCTAATGCTGTTTGGTGGGCTTCTTACTCTTTAGTTCATAGGCTTCTATGGACTAGTCTTGGTTGCCATACAAGTAAAAGAGATGATGAGAGTAGTGATAATTGTGGTTGCAGCGAATATAAGCCGGACCAGAAAGCGGTGGTGGCGATTCAGGGATTGAGTGCCGCAATGGCAAGTGGGGTTTCTTCAGTTATAACAATGCCACTGGATACTATAAAGACTAGATTGCAGGTTTTGGATGGGGAGGAAAATGGACAGCGAAGGCGTTTGACAGTTTTGCAGACTGTTAAGAATTTGGTGAAGGAAGGGGGATTAAGAGCTTGTTACAGGGGGTTGGGCCCAAGATGGATGTCAACTGCTATGTCTGCTACTACTATGATCACTACCTATGAGTTTCTTAAACGGCTATCGGCTAAGAATCAAGACCGGAGAAGTGGAGAAATGAGCAGGTGA 1074 43.85 MNLDTAEDDPAREIHIPAEIDWHMLDKSKFFFLGAGLFSGVSTALYPIIVLKTRQQVSPTKISCLKLSHTIFHHEGFRGFYRGYGTSLMGTIPARALYMGALEITKSNVGSLAMGLGFSETTAMTIANGAAGVSSAMAAQLVWTPIDIVSQRLMVQGCNNGSKDMVPNLNNSLRYRNGIDAFQKIVYSDGLRGLYRGFGISILTYAPSNAVWWASYSLVHRLLWTSLGCHTSKRDDESSDNCGCSEYKPDQKAVVAIQGLSAAMASGVSSVITMPLDTIKTRLQVLDGEENGQRRRLTVLQTVKNLVKEGGLRACYRGLGPRWMSTAMSATTMITTYEFLKRLSAKNQDRRSGEMSR 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10937352 10939303 + Conep07aG0165200.1 Cone7ag1604 442200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1604 357 Gene3D Mitochondrial carrier domain 30 356 IPR023395 -
Cone7ag1604 357 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 222 IPR018108 -
Cone7ag1604 357 SUPERFAMILY Mitochondrial carrier 24 340 IPR023395 -
Cone7ag1604 357 Pfam Mitochondrial carrier protein 126 225 IPR018108 -
Cone7ag1604 357 Pfam Mitochondrial carrier protein 35 108 IPR018108 -
Cone7ag1604 357 Pfam Mitochondrial carrier protein 256 346 IPR018108 -
Cone7ag1604 357 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 108 IPR018108 -
Cone7ag1604 357 ProSiteProfiles Solute carrier (Solcar) repeat profile. 253 343 IPR018108 -
Cone7ag1604 357 PRINTS Mitochondrial carrier protein signature 195 213 IPR002067 GO:0055085(InterPro)
Cone7ag1604 357 PRINTS Mitochondrial carrier protein signature 262 284 IPR002067 GO:0055085(InterPro)
Cone7ag1604 357 PRINTS Mitochondrial carrier protein signature 43 57 IPR002067 GO:0055085(InterPro)
Cone7ag1604 357 PRINTS Mitochondrial carrier protein signature 138 156 IPR002067 GO:0055085(InterPro)
Cone7ag1604 357 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 8 349 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0699 Cone-Chr15:3802527 Cone7ag1604 Cone-Chr7:10937352 4.61E-76 dispersed
Cone7ag1234 Cone-Chr7:9152009 Cone7ag1604 Cone-Chr7:10937352 3.30E-159 transposed
Cone4ag1686 Cone-Chr4:12570440 Cone7ag1604 Cone-Chr7:10937352 3.85E-237 wgd
Cone7ag1604 Cone-Chr7:10937352 Cone9ag1478 Cone-Chr9:10908961 2.27E-14 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1604 K15121 - csv:101213436 529.635