Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1621 ATGGTGGCGGCGGGGCAAGTCGCCGGGAGTTTGACGGCTTATAGCCGGCAGGTATTGGCTGCCATGAACGCCGGCGCGTCGAGTTTCTCGTTTGTGGGGTCGGGGTTCATTGTGCTCTGCTACGTCCTCTTCAAGGAGCTCCGCAAGGTCTCATTCAAGCTTGTCTTCTATCTCGCCGTCGCTGATATGCTTTGCAGTTTCTTCAACATTATTGGAACATCATTAGTAATGACTGTCATATGCTCACTTGGAAATGACCATGGACGCTTAGGCGCATGGCGTTGGGCACAATCTGGACGCACAGGAAAGGCTGTTCACTTTATAACATTTTATCTGCCACTCTGGGGAGCGATTATGTACAATGGTTTTACATATCTTCAAGTGATACGCATGATAAACAATGCAACTCGTATGGCAGTTGGCATTTCGGATAGCGCTTTCCAATCAGATGCCAGAGCAGATATGAAGGCTTTGAACTGTTGGGGATATTATCCTCTTATTCTCATAGGATCGTGGGCATTTGGCACCGTCAATCACATTCATGATTTTATCGAGCCCGGTCGCAAACTATTTTGGCTCTTGGTTCTTGATATTGGATCGGCTGCACTTATGGTACTTATTTTTGCCACTGTTAACATGTTTGCCTTTTATCTTTCTTCCTCTTGGTTTTGGCCAGAAAGGCTTAGGAGATGGCTCCCTAACAGTTCAAGATTTATGAATCAACAGCAAGAGAGTGAACCAGTTTCATTGAAAGTTGATGATCAACATTAG 771 45.65 MVAAGQVAGSLTAYSRQVLAAMNAGASSFSFVGSGFIVLCYVLFKELRKVSFKLVFYLAVADMLCSFFNIIGTSLVMTVICSLGNDHGRLGAWRWAQSGRTGKAVHFITFYLPLWGAIMYNGFTYLQVIRMINNATRMAVGISDSAFQSDARADMKALNCWGYYPLILIGSWAFGTVNHIHDFIEPGRKLFWLLVLDIGSAALMVLIFATVNMFAFYLSSSWFWPERLRRWLPNSSRFMNQQQESEPVSLKVDDQH 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11011410 11013861 + Conep07aG0167000.1 Cone7ag1621 442217

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1621 256 PRINTS GCR1-cAMP receptor family signature 30 48 IPR022343 -
Cone7ag1621 256 PRINTS GCR1-cAMP receptor family signature 49 64 IPR022343 -
Cone7ag1621 256 PANTHER G PROTEIN-COUPLED RECEPTOR 157-RELATED 71 249 - GO:0004930(PANTHER)|GO:0005886(PANTHER)|GO:0007189(PANTHER)
Cone7ag1621 256 PRINTS Putative plant GPCR, GCR1, signature 19 34 IPR022340 -
Cone7ag1621 256 PRINTS Putative plant GPCR, GCR1, signature 36 50 IPR022340 -
Cone7ag1621 256 PRINTS Putative plant GPCR, GCR1, signature 52 74 IPR022340 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1621 K22987 - - mdm:103421099 326.25
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1705 Cone-Chr4:12667495 Cone7ag1621 Cone-Chr7:11011410 2.27E-137 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g174 Blo01g01438 . Bda01g00644 . . Bpe02g00515 . Bma01g02189 . . Cma01g01606 . Car09g00321 . . . Cpe06g00265 . . . . . . . Cla05g01637 Cam05g1746 Cec05g1756 Cco05g1812 Clacu05g1738 Cmu05g1623 Cre05g1750 Cone4ag1705 Cone7ag1621 . . Lsi04g01377 . . . . . . . . . . . Sed13g1922 Cmo01g01688 Cmo09g00373 Cma09g00372 . Car01g01310 . . Cpe02g00297 Bhi09g03068 Tan01g3494 Cmetu07g1418 . . . . . . . . . . . . . . Cme07g00168
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004383 1 3 1 1 1 1 3 1 1 1 1 1 1 1 1 2 1 2 2 1 1 1 1 0 1 1 1 2 6 1 42