Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1629 ATGGCTTCATATTCCTCATCAAAAATCGGTATCATCGGCGCTGGAATTAGCGGAATTGCTGCCGCTAAACAGCTTTCCAGACACAACCCAATTGTCTTTGAAGCCACTGATTCCATCGGTGGCGTTTGGAAACATTGTTCCTACAATTCCACCAAACTCCAAACCCCTCGATGCGATTTCGAATTCTCGGATTATCCATGGCCTCAAAGGGATAACTCCTCTTTCCCTTCTCATCTCGAGCTCTTACAGTATCTGAATGGCTATGCCAATCACTTTGATGTACTCAAGTTCGTCAAGTTCAACTCAAAAGTGGTCCAGATTCGTTACATTAGTGATTCTCAAGATCAAATATTTGGACCCAGCAATAATGAATATGGGAGTCTTCTGAAAGGCCGTCCCGTTTGGGAAGTCGGCGTTCAGAATAGTAAATCCAATGATATTCAGTTGTATGAATTCGAGTTCCTCGTGGTGTGTATCGGTAAATATGGAGATTTACCGAGAATGCCGAGTTTTCCTCCTAACAAAGGACAAGAGGTGTTTAGAGGAAAAGTAATGCACTCCATGGATTACTGTAAGCTTGACAAAGAAGCTGCTAATCAACTGCTCAAAGGGAAGAAAGTTGTAGTTGTTGGTTATAAGAAATCCGCCATCGATTTGGCTGTTGAATGTGCAGAGGCAAACAAAGGAGAAGATGGGCAACCATGCACAATGGTGATAAGAACCCTACATTGGACAGTGCCATCTTACAAGATATGGGGGTTTCCTTTCTTCTTATTTTACTCCACAAGATCTTCTCAGTTCCTCCATGAAAGACCCAACGAGAGCTTCCTCAAGACCCTCTACTGCTATCTTCTCTCTCCGATGAGAAGTGCAACGTCGAAGTTCATTGAGTCATACTTATCATGGAAACTGCCATTAGAGAAATATGGTCTGAGGCCAGATCATCCATTTTTGGAGGACTATGCATCTTGTCAAATGGCAATCTTGCCGGAAAATTTCTTCTCCGAGGCCGAAAAGGGAAACATATTGTTCAAAAGGGCATCAAAATGGTGGTTTTGGGAAGGTGGGGTTGAATTTGAAGACAAAACAAAGTTGGAGGCTGATCTAGTTCTTCTTGCTACTGGTTTTGATGGCAAAAAGAAGCTCCAAACTATACTGCCTGAGCCCTTTACAAGCCTCATGGTCGATTCAAATGGTGTCATGCCGCTATACAGAGGGACAGTTCATCCGGTAATTCCGAACATGGCGTTTGTGGGGTATGTCGAGAGCATCTCGAACCTCCACACGGCGGAGCTACGGTGCATATGGCTATCAAAATTGGCGGATGACATGTTCAAGCTTCCTAGTGTTGACAAGATGCTAGATCAGATTGCAAAAGAGATGGAAGTGATGAAGAAGACGACTCGGTTTTATAAGAGGCATTGCATTTCTACTTTCAGTATAAACCACAGCGATGAGATATGCGAGGAAATGGGATGGAAATCATGGAGGAAGAGTAACCTGTTGCTTGAAGCTTTCCTGCCCTACAGCAGCCAGGACTATTTAGATCAAGAAGAAAGTCATAAAGACCTTGCTCTCTGA 1581 43.52 MASYSSSKIGIIGAGISGIAAAKQLSRHNPIVFEATDSIGGVWKHCSYNSTKLQTPRCDFEFSDYPWPQRDNSSFPSHLELLQYLNGYANHFDVLKFVKFNSKVVQIRYISDSQDQIFGPSNNEYGSLLKGRPVWEVGVQNSKSNDIQLYEFEFLVVCIGKYGDLPRMPSFPPNKGQEVFRGKVMHSMDYCKLDKEAANQLLKGKKVVVVGYKKSAIDLAVECAEANKGEDGQPCTMVIRTLHWTVPSYKIWGFPFFLFYSTRSSQFLHERPNESFLKTLYCYLLSPMRSATSKFIESYLSWKLPLEKYGLRPDHPFLEDYASCQMAILPENFFSEAEKGNILFKRASKWWFWEGGVEFEDKTKLEADLVLLATGFDGKKKLQTILPEPFTSLMVDSNGVMPLYRGTVHPVIPNMAFVGYVESISNLHTAELRCIWLSKLADDMFKLPSVDKMLDQIAKEMEVMKKTTRFYKRHCISTFSINHSDEICEEMGWKSWRKSNLLLEAFLPYSSQDYLDQEESHKDLAL 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11031126 11033335 + Conep07aG0167800.1 Cone7ag1629 442225

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1629 526 Pfam Flavin-binding monooxygenase-like 8 495 IPR020946 GO:0004499(InterPro)|GO:0050660(InterPro)|GO:0050661(InterPro)
Cone7ag1629 526 Gene3D - 5 276 IPR036188 -
Cone7ag1629 526 FunFam Flavin-containing monooxygenase 6 274 - -
Cone7ag1629 526 FunFam Flavin-containing monooxygenase 325 517 - -
Cone7ag1629 526 SUPERFAMILY FAD/NAD(P)-binding domain 8 229 IPR036188 -
Cone7ag1629 526 PIRSF FMO 5 509 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Cone7ag1629 526 PANTHER DIMETHYLANILINE MONOOXYGENASE 7 502 IPR050346 -
Cone7ag1629 526 SUPERFAMILY FAD/NAD(P)-binding domain 326 516 IPR036188 -
Cone7ag1629 526 Gene3D - 331 520 IPR036188 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1629 K00485 - - mdm:103400081 826.239
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag1266 Cone-Chr12:9718783 Cone7ag1629 Cone-Chr7:11031126 1.48E-140 dispersed
Cone7ag1629 Cone-Chr7:11031126 Cone7ag1929 Cone-Chr7:12323978 3.26E-18 dispersed
Cone4ag1711 Cone-Chr4:12691987 Cone7ag1629 Cone-Chr7:11031126 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g187 . . . . . Bpe02g00314 . . . . . . . . . . . Bhi04g01538 Tan02g1562 Cmetu03g0531 . Hepe08g1457 . Lcy13g2236 . . . . . . . Cone4ag1711 Cone7ag1629 . . . . . . Blo17g00265 . . . Bpe14g00290 . . Bma02g00330 . . . . . . . . . . . . . . . . Cla08g00973 Cam08g1422 Cec08g1001 Cco08g1124 Clacu08g1126 . Cre08g0910 Lsi08g00821 . Chy03g00644 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002096 2 2 3 2 3 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 3 2 2 2 2 3 2 2 2 2 63