Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1631 ATGCACGAGCACAACCAAAGAAAAAAGGCTTTGAACAAAAAGTCTTCTGGGCCTTTGGGCTTTAGAGCTTTGACATTTGAGGGCTTGGGCTCGGGGCGGATTGCGGGTCTCCGGAACGAAAATGGATTCAGAAGAAATAGTGAAAATGAGATTAGAAGAACTGCAGAAAGATTTTGGGAAGAAGCTGAAATTCGAGAATGCGGTTGCTTCTCTCTTTTCCCTCCTCCGCGACCGCTACCTTTCTGCTTCTCCTTCCCTCCGCAAATCGCTGTATTCTGCAATTTGCCGCGTCGCAACTGTTCTGAAAACTCGATACACTGCTCCTGGTTTCTGGCTCGCCGGCCTCTCTCTCTCTTCGAGCTTGCCCTAACGCTCCTCTCTGATCCTTCTGAGAAGCAGTACGCGCTCTCTTGCGTTGCTCAGGCTAAGGAGATTTTGCACCAGGAAGAAGACAATGCTCCAGCTCAACCCTCGGGAAATAGAGGAGGATATCTCTTTGAGGGACACCTGACCGTTGATCCAGAGCCGCCCCAACCTCAATGGCTGGTGCAATCGAATCTCTTGTCTACTGCAGCTACTCTCTTTGCCGCCGGATCTTCTCAGAATCCAGCTGATAACAATACCTTGACTGAAAATGCTGCAAGTGTTCTTCAATCCCTTATTGGAAATATGGATGGTGTTTTGCCGGAGATCTTGGAAGATGTGAATCAACCGCCAAGAGTTCCACCTGCAAGTAAAGAAGTAGTTGCAAAACTTCCAATCATAACTATAACAGCGGAAGTGCTTACTAAGCTGAGAAGCCTGGGAAAAGATGCAGAGTGTGCTATTTGCAAGGAGGAGTTGGTTGTGAATGACAAGATGCAGGAGTTGCCTTGCAAGCACACATTCCACCCACCTTGTCTAAAGCCATGGCTGGATGAGCATAATTCTTGTCCAATTTGTCGGCATGAGTTGCAAACGGATGATCATGCATATGAGAGCTGGAAGGAAAGAGAGAAGGAGGCTGAAGGAGAAATGAAAGGGGCTGCAAATGCCGTACGTGGTGGTGAATACATGTATGTTTAG 1065 47.79 MHEHNQRKKALNKKSSGPLGFRALTFEGLGSGRIAGLRNENGFRRNSENEIRRTAERFWEEAEIRECGCFSLFPPPRPLPFCFSFPPQIAVFCNLPRRNCSENSIHCSWFLARRPLSLFELALTLLSDPSEKQYALSCVAQAKEILHQEEDNAPAQPSGNRGGYLFEGHLTVDPEPPQPQWLVQSNLLSTAATLFAAGSSQNPADNNTLTENAASVLQSLIGNMDGVLPEILEDVNQPPRVPPASKEVVAKLPIITITAEVLTKLRSLGKDAECAICKEELVVNDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHAYESWKEREKEAEGEMKGAANAVRGGEYMYV 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11039458 11041117 - Conep07aG0168000.1 Cone7ag1631 442227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1631 354 ProSiteProfiles Zinc finger RING-type profile. 274 315 IPR001841 -
Cone7ag1631 354 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 151 319 - GO:0005737(PANTHER)|GO:0016567(PANTHER)|GO:0061630(PANTHER)
Cone7ag1631 354 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 233 321 IPR013083 -
Cone7ag1631 354 FunFam E3 ubiquitin-protein ligase RNF181 232 321 - -
Cone7ag1631 354 SMART ring_2 274 314 IPR001841 -
Cone7ag1631 354 SUPERFAMILY RING/U-box 268 321 - -
Cone7ag1631 354 Coils Coil 325 345 - -
Cone7ag1631 354 CDD RING-H2_RNF126-like 273 315 - -
Cone7ag1631 354 Pfam Ring finger domain 273 315 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1713 Cone-Chr4:12700966 Cone7ag1631 Cone-Chr7:11039458 3.12E-159 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1631 K16274 - gmx:100800189 321.242