Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag1644 | ATGGCATCCAAGCTGTGCGATTCTTGCAAAACAACGACGGCTACTCTGTTCTGCCGCGCCGACTCCGCTTTTCTCTGCGTAGGCTGTGACACAAAGGTCCACGCGGCCAACAAGCTCGCTTCTCGACACGCGCGCGTTTGGGTCTGTGAGGTCTGCGAGCAAGCTCCGGCTCAAGTCGCGTGCAAGGCGGATGCAGCCGTTCTCTGCGCCGGCTGCGACCGTGACATCCACTCAGCTAACCCTCTCGCTCGCCGTCACGAGCGCGTTCCCGTGACTCCTTTCTACGACTCCGCTGTCAAACCTGGTGCCGCCGGTAACTCATTTGAAGGTCGTCGCCTCTCCGATGTAGATGAGGAAGCTAATCTCAGCAGGGATGAGGTAGAGGCTGCTTCCTGGCTGCTCCCGAACCCTAATTCCAAGGCGATTGAGAGTCCGGACCTGAATTCCAGTCAGTTCGTGTTTCCAGAAATGGATACGTATCTTAATCTTGATTACGGATCTGTTGATCTGGAATCGAAGGTAGAGGAACAGAGCAGCCCAGGCGCCGATGGAGTAGTACCGGTAGAAAGCAATAGCTTACAACATCCCATGGCGAACGGGAGCTACTTCGCCACAGGTTTAACCGAGGCCAAATCCTTTTCTTACGGTTACAACACGCACTCCGCAAGCCAGAGCTTATCTTCCTCATCTATGGAGGTTGCGGTGGTACCTGACGGCAGCGCCATGAACGATATATCAAATCCATACGCAAAACCTGCAGCAGAGCCGACAACAAATCAGGCGGTGCAAATTTCAGCAGCGGATCGGGAAGCGAGAGTGTTGAGGTACAGAGAGAAGCGGAAGAATCGCAAGTTTGAGAAGACGATCCGCTACGCCTCGAGAAAAGCTTACGCTGAGACGAGACCTCGAATCAAAGGAAGATTCGCTAAACGAACAGATGAAGTCTGGGGATACGGCGTCGTTCCGACTCTTGGATAG | 978 | 54.09 | MASKLCDSCKTTTATLFCRADSAFLCVGCDTKVHAANKLASRHARVWVCEVCEQAPAQVACKADAAVLCAGCDRDIHSANPLARRHERVPVTPFYDSAVKPGAAGNSFEGRRLSDVDEEANLSRDEVEAASWLLPNPNSKAIESPDLNSSQFVFPEMDTYLNLDYGSVDLESKVEEQSSPGADGVVPVESNSLQHPMANGSYFATGLTEAKSFSYGYNTHSASQSLSSSSMEVAVVPDGSAMNDISNPYAKPAAEPTTNQAVQISAADREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDEVWGYGVVPTLG | 325 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 11095778 | 11097227 | + | Conep07aG0169300.1 | Cone7ag1644 | 442240 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag1644 | 325 | ProSiteProfiles | CCT domain profile. | 269 | 311 | IPR010402 | GO:0005515(InterPro) | |
Cone7ag1644 | 325 | CDD | Bbox1_BBX-like | 48 | 91 | IPR049808 | - | |
Cone7ag1644 | 325 | ProSiteProfiles | Zinc finger B-box type profile. | 1 | 48 | IPR000315 | GO:0008270(InterPro) | |
Cone7ag1644 | 325 | CDD | Bbox1_BBX-like | 5 | 48 | IPR049808 | - | |
Cone7ag1644 | 325 | Pfam | CCT motif | 269 | 311 | IPR010402 | GO:0005515(InterPro) | |
Cone7ag1644 | 325 | SMART | bboxneu5 | 1 | 48 | IPR000315 | GO:0008270(InterPro) | |
Cone7ag1644 | 325 | SMART | bboxneu5 | 49 | 91 | IPR000315 | GO:0008270(InterPro) | |
Cone7ag1644 | 325 | PANTHER | ZINC FINGER PROTEIN CONSTANS-LIKE 4 | 4 | 316 | IPR045281 | GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0009909(InterPro)|GO:0009909(PANTHER) | |
Cone7ag1644 | 325 | Pfam | B-box zinc finger | 4 | 42 | IPR000315 | GO:0008270(InterPro) | |
Cone7ag1644 | 325 | Pfam | B-box zinc finger | 46 | 91 | IPR000315 | GO:0008270(InterPro) | |
Cone7ag1644 | 325 | ProSiteProfiles | Zinc finger B-box type profile. | 44 | 91 | IPR000315 | GO:0008270(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone11ag0169 | Cone-Chr11:831280 | Cone7ag1644 | Cone-Chr7:11095778 | 2.97E-59 | dispersed | |
Cone11ag0338 | Cone-Chr11:1643363 | Cone7ag1644 | Cone-Chr7:11095778 | 6.05E-31 | dispersed | |
Cone18ag1317 | Cone-Chr18:9138154 | Cone7ag1644 | Cone-Chr7:11095778 | 3.09E-53 | dispersed | |
Cone6ag0443 | Cone-Chr6:2161648 | Cone7ag1644 | Cone-Chr7:11095778 | 1.10E-07 | dispersed | |
Cone6ag0795 | Cone-Chr6:4041890 | Cone7ag1644 | Cone-Chr7:11095778 | 7.83E-09 | dispersed | |
Cone7ag1644 | Cone-Chr7:11095778 | Cone8ag1358 | Cone-Chr8:10874011 | 2.69E-09 | dispersed | |
Cone4ag1724 | Cone-Chr4:12765271 | Cone7ag1644 | Cone-Chr7:11095778 | 9.42E-164 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46581 | PF14438 | SM-ATX | 1.40E-26 | CL0527 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag1644 | - | - | - | 0.0 |