Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1645 ATGGGCTATCTGAATCCGGTATTGTCATGTTCAAGCCAGGTTCATGCTGCTGAGGACGTACCTGTAACCGGTGGTGGCCTCAGTCAAAATGGAAAGTTCAGCTACGGATATGCAAGCTCTCCTGGGAAAAGGTCGTCAATGGAAGATTTCTACGAGACACGAATTGATGGTGTGGAAGGAGAAATTGTTGGTCTCTTTGGGGTCTTTGATGGTCATGGGGGTGCCCGAGCTGCTGAGTATGTCAAGCAAAATCTTTTCAGTAATCTAATTAGCCATCCAAAATTCATTTCTGATACCAAATCAGCAATAGCTGATGCATACAACCACACAGATTCAGAATTTCTGAAATCGGAAAACAATCAAAATCGTGATGCGGGATCAACCGCTTCCACTGCCATCCTTGTAGGTGATCGTTTACTTGTTGCAAATGTTGGAGATTCAAGAGCTGTTATATGCCGAGGTGGCAATGCCATTGCTGTTTCTCGAGATCACAAACCAGATCAAACTGATGAGCGACAAAGGATAGAGGATGCAGGAGGATTTGTGATGTGGGCCGGTACGTGGAGAGTTGGAGGTGTTCTTGCTGTTTCACGTGCTTTTGGTGATAGGTTGTTGAAGCAGTATGTTGTTGCCGATCCAGAAATTCAGGAGGAAAAAGTTGACAGTTCTCTGGAGTTCCTCATACTCGCAAGTGATGGACTTTGGGATGTTGTCTCTAACGAGGAGGCTGTTTCGATGATCAAACCAATCGAAGATCCAGAGGAAGCTGCAAGGAGGCTTATGCAAGAAGCATATCAGAGAGGCAGTGCAGATAATATTACCTGTGTCGTGGTCCGTTTCTTGGCCAATCAAGGCGGTCCCTCTCATGGAAGTTCTGGGTGA 882 45.92 MGYLNPVLSCSSQVHAAEDVPVTGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKQNLFSNLISHPKFISDTKSAIADAYNHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVSMIKPIEDPEEAARRLMQEAYQRGSADNITCVVVRFLANQGGPSHGSSG 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11098796 11102786 - Conep07aG0169400.1 Cone7ag1645 442241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1645 293 SMART PP2C_4 24 278 IPR001932 -
Cone7ag1645 293 PANTHER PROTEIN PHOSPHATASE 34 279 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cone7ag1645 293 CDD PP2Cc 33 280 IPR001932 -
Cone7ag1645 293 SUPERFAMILY PP2C-like 28 280 IPR036457 -
Cone7ag1645 293 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169(InterPro)
Cone7ag1645 293 FunFam probable protein phosphatase 2C 59 26 284 - -
Cone7ag1645 293 Gene3D - 26 284 IPR036457 -
Cone7ag1645 293 SMART PP2C_SIG_2 45 280 IPR001932 -
Cone7ag1645 293 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
Cone7ag1645 293 Pfam Protein phosphatase 2C 63 273 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0057 Cone-Chr4:293560 Cone7ag1645 Cone-Chr7:11098796 2.05E-57 dispersed
Cone5ag0671 Cone-Chr5:2870663 Cone7ag1645 Cone-Chr7:11098796 1.03E-113 dispersed
Cone7ag0053 Cone-Chr7:230820 Cone7ag1645 Cone-Chr7:11098796 1.99E-57 dispersed
Cone7ag1486 Cone-Chr7:10425499 Cone7ag1645 Cone-Chr7:11098796 2.26E-125 dispersed
Cone7ag1645 Cone-Chr7:11098796 Cone8ag1519 Cone-Chr8:11461738 1.61E-63 dispersed
Cone4ag1725 Cone-Chr4:12767565 Cone7ag1645 Cone-Chr7:11098796 3.35E-208 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1645 K17506 - csv:101216117 554.288