Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1661 ATGGGTATTTACCTTAGCACTCCGAAAACTGAAAAATTCTCTGAAGATGGAGGAAATGAAAGGCTTAGATATGGTCTGTCCTCCATGCAAGGTTGGCGTGCAACTATGGAAGATGCTCACGCTGCATATCCTGATCTGGATGCTTCAACTTCATTCTTCGGTGTTTATGATGGTCATGGAGGTAAGGTGGTTGCCAAGTTCTGTGCGAAGTATCTCCACCAGCAAGTTCTGAAAAGTGCAACATATGCTGCTGGGGATGTAGGAACTTCTGTTCAGAAAGCATTTTTCAGAATGGATGAAATGATGCGTGGGCAAAGGGGCTGGAGAGAATTAGCTGTTTTGGGTGATAAAATAAACAAGTTTACTGGCATGATAGAAGGGTTGATCTGGTCCCCAAGAAGCAGTGATGGGAATGACCAAGTTGATGATTGGGCTTTTGAAGAGGGCCCACACTCTGATTTTATGGGCCCAACTTCAGGGTGCACAGCTTGTGTTGCCATTCTTAGAAACAACCAACTTGTCGTAGCAAATGCCGGAGATTCTCGCTGTGTTTTATCAAGAAAGGGTCAGGCACACAATCTGTCGAGAGATCACAAACCTGATCTTGAGGCTGAAAAGGAAAGAATTCTGAAAGCTGGTGGTTTTATTCATGCTGGTCGAGTCAATGGTAGCTTGAACCTAGCTAGAGCTATTGGTGACATTGAATTCAAGCAGAATAAATTTTTTCCAGCTGAAAGGCAAATTGTAACCGCCAATCCCGATGTTCTCAATATCGAGCTTTCTGAGGATGATGAGTTTCTTGTGCTCGCATGTGATGGAATCTGGGACTGCCTATCTAGCCAGCAACTGGTAGATTTTATACATGAGCAACTTCTTTCCGAAAGCAAGCTCTCTGTAGTGTGTGAGAGAGTGATGGATCGGTGTTTGGCCCCATCAACAGCTGGAGGGGAAGGATGTGATAATATGACTATGATTTTGGTGCAGTTCAAGAAACCCATTACTCCGTCTAATGATAGATCTGAAAATAAGCAACCTACTTCACCCGGCAGAAAAGAAGATGTTTCTGTGTCGGGACAAGGAGACAGTAACCGGGAAGTAGTGGCTTCAAGCTCTTCTTGA 1119 44.24 MGIYLSTPKTEKFSEDGGNERLRYGLSSMQGWRATMEDAHAAYPDLDASTSFFGVYDGHGGKVVAKFCAKYLHQQVLKSATYAAGDVGTSVQKAFFRMDEMMRGQRGWRELAVLGDKINKFTGMIEGLIWSPRSSDGNDQVDDWAFEEGPHSDFMGPTSGCTACVAILRNNQLVVANAGDSRCVLSRKGQAHNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDIEFKQNKFFPAERQIVTANPDVLNIELSEDDEFLVLACDGIWDCLSSQQLVDFIHEQLLSESKLSVVCERVMDRCLAPSTAGGEGCDNMTMILVQFKKPITPSNDRSENKQPTSPGRKEDVSVSGQGDSNREVVASSSS 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11158108 11161766 - Conep07aG0171000.1 Cone7ag1661 442257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1661 372 MobiDBLite consensus disorder prediction 333 353 - -
Cone7ag1661 372 SMART PP2C_SIG_2 28 329 IPR001932 -
Cone7ag1661 372 Pfam Protein phosphatase 2C 157 313 IPR001932 -
Cone7ag1661 372 Pfam Protein phosphatase 2C 23 104 IPR001932 -
Cone7ag1661 372 CDD PP2Cc 23 329 IPR001932 -
Cone7ag1661 372 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169(InterPro)
Cone7ag1661 372 PANTHER PROTEIN PHOSPHATASE 2C 21 330 IPR015655 GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER)
Cone7ag1661 372 SUPERFAMILY PP2C-like 3 330 IPR036457 -
Cone7ag1661 372 SMART PP2C_4 13 327 IPR001932 -
Cone7ag1661 372 MobiDBLite consensus disorder prediction 332 372 - -
Cone7ag1661 372 Gene3D - 1 330 IPR036457 -
Cone7ag1661 372 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag1661 Cone-Chr7:11158108 Cone7ag1942 Cone-Chr7:12392172 2.10E-40 dispersed
Cone20ag1132 Cone-Chr20:7728195 Cone7ag1661 Cone-Chr7:11158108 1.41E-196 wgd
Cone4ag1741 Cone-Chr4:12829972 Cone7ag1661 Cone-Chr7:11158108 4.13E-208 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1661 K17499 - mdm:103442179 627.476