Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag1672 | ATGATGGTTGAGCAGAGTATAGAGGATCCAAACGACCAGTTCCCGATCGGTATGCGTGTTCTAGCCGTCGACGACGATCCTACTTGCCTCTTGCTCTTAGAAACTCTTCTTCGTCGTTGCCAATATCACGTCACTACAACAAATCAGGCAATAACAGCTCTAAGAATGTTGAGAGAGAACAAGAACAAGTTTGATCTAGTTATCAGTGATGTCCACATGCCTGACATGGATGGGTTTAAGCTTCTTGAGCTTGTTGGCCTCGAGATGGATCTGCCTGTCATTATGTTATCTGCGAATGGAGATACAAAGCTTGTCATGAAGGGGATAACTCATGGAGCCTGTGATTATTTGCTTAAACCCGTTCGGATTGAGGAACTACAGAATATATGGCAGCATGTGATTCGTAGAAAGAAGTTCGATCCAAAGGACAAGAGTAATTCTGGGAATCATGACAAGACTCAGTTTGGGAACGGAGAAGGAGGATTGGCCGGGATGGGCAATGTGGATCAAAGTGGGAAGCTCAAAAAAAGAAGGAAGTACCCAAATGAAGATGACGATGAGGAGAATGATGATAACGGGATGGATATTGAAGACCCGTCGGCCCAAAAGAAGCCTCGGGTCGTTTGGTCCGTTGAGCTCCATCGCAAATTCGTAAATGCAGTTAACCAGCTCGGCATAGACAAGGCTGTGCCTAAGAGAATCCTAGATTTGATGAATGTAGAAAAGCTTACAAGGGAAAATGTAGCAAGTCATCTCCAGAAATATAGGCTTTACCTGAAAAGAATCAGCTCAGTGGCAAGCCTGCAGCAACATTCTACATTCACAGATTCTTCCTACATGGAAATCAATTCCCTTAACCAAATCAGAAACTTGCATACTTCAGCCGGATCCTCTTCACAGTATCATAACAACGGTTATTTTCGATCCAACCCAAATACTGGAATGCTTGATAGATTGAATACACCGTATAATATGGGAATCCAGACGCTTTCTTCTCCTTCCGGAAAATACCGATTGAATAACTCGATCAACTATAACAAGCATAATGTCAACTTTGTTGGAGATTTCTCCCCTGCTCTGCGGATTCTAAACGACCTTCCTGATGAAAAAATGACTGTTCCTAGCTTGAGCAATAATCCTACTTTTAGTTTATCTAATATGTCCTTCGTATCATCGTCCGGACAGTGTCAAGAAACACAAGGAGGTGTACAATTCGGAAATCACTTTTCTCAATCTTCTGTTTCACCCGGTTTTGTAAATAACCAAGCTTGGATGACCGCTGCCCAGTCGTCCAGGGTCGAAGCTAATGCTTTTCTACCAAGTTCGTCTCAAATGAGTAGTAGCAGTAGTAGTATTAGATGCAATCAGCAGATAATTACGGAAATGCCACTTCAAGGATGGGAGAATTCTGTGGTTGATGTTAATGGTGGAGCGGCTCAAATGTTGGGGAATGGAAGTATGGTTTTTTCCGGGAATGAGGATTTCGATTTGATCGGAAGGTCGGAGTTACTGGATCATCCGGAGAACGTGAAAGACAGTTTCGGTTCCTTGGAAGATTTGGCTCGGGCCATGACCAAACAGGAACAAGTTAAGGAGAAATTATTGGAAGGGGAGTTTGGATGCGATAGTACTTATGCTATCGGAACATGCATCTGA | 1656 | 43.18 | MMVEQSIEDPNDQFPIGMRVLAVDDDPTCLLLLETLLRRCQYHVTTTNQAITALRMLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDTKLVMKGITHGACDYLLKPVRIEELQNIWQHVIRRKKFDPKDKSNSGNHDKTQFGNGEGGLAGMGNVDQSGKLKKRRKYPNEDDDEENDDNGMDIEDPSAQKKPRVVWSVELHRKFVNAVNQLGIDKAVPKRILDLMNVEKLTRENVASHLQKYRLYLKRISSVASLQQHSTFTDSSYMEINSLNQIRNLHTSAGSSSQYHNNGYFRSNPNTGMLDRLNTPYNMGIQTLSSPSGKYRLNNSINYNKHNVNFVGDFSPALRILNDLPDEKMTVPSLSNNPTFSLSNMSFVSSSGQCQETQGGVQFGNHFSQSSVSPGFVNNQAWMTAAQSSRVEANAFLPSSSQMSSSSSSIRCNQQIITEMPLQGWENSVVDVNGGAAQMLGNGSMVFSGNEDFDLIGRSELLDHPENVKDSFGSLEDLARAMTKQEQVKEKLLEGEFGCDSTYAIGTCI | 551 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 11219297 | 11222161 | - | Conep07aG0172300.1 | Cone7ag1672 | 442268 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag1672 | 551 | Pfam | Response regulator receiver domain | 20 | 128 | IPR001789 | GO:0000160(InterPro) | |
Cone7ag1672 | 551 | SUPERFAMILY | CheY-like | 17 | 139 | IPR011006 | - | |
Cone7ag1672 | 551 | SUPERFAMILY | Homeodomain-like | 202 | 261 | IPR009057 | - | |
Cone7ag1672 | 551 | FunFam | Two-component response regulator | 200 | 263 | - | - | |
Cone7ag1672 | 551 | ProSiteProfiles | Response regulatory domain profile. | 19 | 134 | IPR001789 | GO:0000160(InterPro) | |
Cone7ag1672 | 551 | SMART | REC_2 | 18 | 130 | IPR001789 | GO:0000160(InterPro) | |
Cone7ag1672 | 551 | PIRSF | RR_ARR_type-B | 1 | 534 | IPR017053 | GO:0003677(InterPro)|GO:0003700(InterPro)|GO:0009736(InterPro) | |
Cone7ag1672 | 551 | Gene3D | - | 200 | 263 | - | - | |
Cone7ag1672 | 551 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 13 | 328 | IPR045279 | GO:0009736(InterPro) | |
Cone7ag1672 | 551 | Pfam | Myb-like DNA-binding domain | 206 | 256 | IPR001005 | - | |
Cone7ag1672 | 551 | CDD | REC_typeB_ARR-like | 20 | 134 | - | - | |
Cone7ag1672 | 551 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 204 | 257 | IPR006447 | GO:0003677(InterPro) | |
Cone7ag1672 | 551 | FunFam | Two-component response regulator | 18 | 171 | - | - | |
Cone7ag1672 | 551 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 201 | 260 | IPR017930 | - | |
Cone7ag1672 | 551 | Gene3D | - | 18 | 159 | - | - | |
Cone7ag1672 | 551 | MobiDBLite | consensus disorder prediction | 140 | 201 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone19ag1096 | Cone-Chr19:7950857 | Cone7ag1672 | Cone-Chr7:11219297 | 9.83E-89 | dispersed | |
Cone4ag0123 | Cone-Chr4:575340 | Cone7ag1672 | Cone-Chr7:11219297 | 1.11E-83 | dispersed | |
Cone7ag0120 | Cone-Chr7:505034 | Cone7ag1672 | Cone-Chr7:11219297 | 1.00E-86 | dispersed | |
Cone7ag1672 | Cone-Chr7:11219297 | Cone8ag0716 | Cone-Chr8:7215291 | 6.91E-87 | dispersed | |
Cone20ag0334 | Cone-Chr20:1496150 | Cone7ag1672 | Cone-Chr7:11219297 | 6.42E-69 | wgd | |
Cone4ag1755 | Cone-Chr4:12894931 | Cone7ag1672 | Cone-Chr7:11219297 | 0 | wgd | |
Cone4ag0611 | Cone-Chr4:2810489 | Cone7ag1672 | Cone-Chr7:11219297 | 5.62E-119 | wgd | |
Cone7ag0579 | Cone-Chr7:2779087 | Cone7ag1672 | Cone-Chr7:11219297 | 7.93E-119 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46583 | PF00069 | Pkinase | 1.20E-66 | CL0016 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag1672 | K14491 | - | csv:101215220 | 498.434 |