Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag1675 | ATGGCCCGGCAGCAACAGCGATACCGTGGGGTCCGACAACGCCACTGGGGCTCTTGGGTGTCCGAGATTCGCCATCCTCTATTGAAGACGAGGATATGGTTAGGGACGTTTGAAACAGCAGAAGACGCAGCAAGAGCGTACGATGAAGCAGCGAGGCTAATGTGTGGGCCCAGAGCCCGAACCAACTTCGCATATAATAGCAGCAACAACACTTCTTCATCGAAGCTTCTCTCCGCCAATTTGACAGCGAAATTGCACAGATGCTATTTAGCTTCTCTGCAGCTGACCAATCAGTTTCCAGCACAAGATGATCACGCCAACACGTCAGATTCACAGTCGCCACGTGTCATTGGGACAGGTGGCATTGTGGAAACGAGTAGCAGCAGCCATTGTACTAGTAATATAACTACACGGTTGCAGGATAAGAGACCCGTAGCTGATTATCATCACCAAGCAGCTGATCAGAATAATAATTGGATGGTAATGAAGAAAGTGAAGGTGGAGAGTAATAGTAGCAGTAGTTTCGAGCAATTCAAGCCACTTGAAGATGATCATATAGAGCAGATGATTCAGGAATTGCTTCACTATGGCTCTATTGAGCTTTGCTCTATTAATATGCATTCTTAA | 627 | 46.73 | MARQQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFAYNSSNNTSSSKLLSANLTAKLHRCYLASLQLTNQFPAQDDHANTSDSQSPRVIGTGGIVETSSSSHCTSNITTRLQDKRPVADYHHQAADQNNNWMVMKKVKVESNSSSSFEQFKPLEDDHIEQMIQELLHYGSIELCSINMHS | 208 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 11230679 | 11231612 | - | Conep07aG0172600.1 | Cone7ag1675 | 442271 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag1675 | 208 | SMART | rav1_2 | 7 | 70 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone7ag1675 | 208 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C | 4 | 176 | - | - | |
Cone7ag1675 | 208 | Gene3D | AP2/ERF domain | 6 | 65 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone7ag1675 | 208 | Pfam | AP2 domain | 7 | 56 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone7ag1675 | 208 | CDD | AP2 | 6 | 65 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone7ag1675 | 208 | PRINTS | Ethylene responsive element binding protein signature | 8 | 19 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone7ag1675 | 208 | PRINTS | Ethylene responsive element binding protein signature | 30 | 46 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone7ag1675 | 208 | SUPERFAMILY | DNA-binding domain | 7 | 65 | IPR016177 | GO:0003677(InterPro) | |
Cone7ag1675 | 208 | FunFam | Ethylene-responsive transcription factor 2 | 6 | 65 | - | - | |
Cone7ag1675 | 208 | ProSiteProfiles | AP2/ERF domain profile. | 7 | 64 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone18ag0578 | Cone-Chr18:2866079 | Cone7ag1675 | Cone-Chr7:11230679 | 5.28E-51 | dispersed | |
Cone4ag1792 | Cone-Chr4:13040697 | Cone7ag1675 | Cone-Chr7:11230679 | 2.27E-24 | dispersed | |
Cone7ag0635 | Cone-Chr7:3242891 | Cone7ag1675 | Cone-Chr7:11230679 | 1.26E-29 | dispersed | |
Cone7ag1675 | Cone-Chr7:11230679 | Cone7ag1701 | Cone-Chr7:11339494 | 1.54E-24 | dispersed | |
Cone17ag0995 | Cone-Chr17:7664321 | Cone7ag1675 | Cone-Chr7:11230679 | 8.13E-67 | wgd | |
Cone17ag0252 | Cone-Chr17:1193973 | Cone7ag1675 | Cone-Chr7:11230679 | 2.23E-18 | wgd | |
Cone20ag0337 | Cone-Chr20:1511034 | Cone7ag1675 | Cone-Chr7:11230679 | 2.47E-68 | wgd | |
Cone4ag1757 | Cone-Chr4:12906148 | Cone7ag1675 | Cone-Chr7:11230679 | 4.44E-128 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46584 | PF13639 | zf-RING_2 | 1.60E-13 | CL0229 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag1675 | - | - | - | 0.0 |