Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1677 ATGAAAGTTTATCTTCTCATTCTTTCTGTTCTTCTAGTTTATCTTGATAAAAAACCCTGCGCCATTTGGGTCGCGGCTACACCAAGATCAAACCATCTCGTTTTGTCGACATCAGCTCCGATTTCTTCACCATCTTTCTCACAGATTTCTCCAATTCCTTCTGTTTCTTCCGCCGCTGCCGTTTTCTCCCCTGGAACCCAGACGGAAAGTGAAGAGCACAAAACGGATTCTCGTAAGAAATTAGTGATAGCAGTTGTTGTGGGAGTTTCAGTTTTTGCACTCTTACTGCTCTTGTTGTGCTTGTGGATTTTCCATAGAAGCCACCCCAAAAAATTTGGAGATGGTGAGAAAGGGCTTGCATTGGCTCCATTTTTGGGTAAATTAGGTTCTGTCAAGACTTTTGCTAAGAGAGGATCTGTATCATTGATTGATTATAAGCTGATAGAGAAGGCAACAGAGAATTTTCTGGAGGGTAATATTTTAGGTGAGGGTGGATTTGGGCGGGTTTACAAGGCTCAATTGGAAGATAATTTCTATGTTGCTGTCAAGAAACTTGAATGCCCTGCTCATGATGCTGAGAGAGAATTTCAGAATGAAGTGGATTTGTTAAGCAAAATTCAGCATCCTAATGTCATATCCTTGTTGGGATATAGTTCTCATGAAGATTCAAGGTTCATTGTTTACGAACTAATGGATAATGGATCTCTGGAAACTAAAATACATGGTCCTTCTCATGGTTCAGAGTTAACCTGGCAAATGCGGATGAAAATTGCTCTTGATGCAGCTAGAGGATTGGAGTATTTGCATGAGCACTGCAACCCTCCAGTGATCCATAGAGATCTGAAATCATCTAATATTCTTTTAGATGCCAACTTCAATGCCAAGCTGTCTGATTTTGGTCTTGCTGTAACTGGTGGGACCCAAAGCAGGAGCAATATCAAGCTCTCAGGCACATTGGGTTATGTAGCTCCAGAGTATATTTTAGATGGTAAATTGACTGATAAAAGTGATGTCTATGCATTTGGGGTTGTGCTTCTAGAACTTCTATTAGGGAGAAGGCCAGTAGAAAAATTGGCACCAGCTCAGTGCCAATCTATTGTCACATGGGCCATGCCTCAGCTTACAGACAGGTCAAAGCTACCTAACATTTTGGATCCCGTCATTAAAAATACAATGGATCTCAAACACTTGTACCAGGTTGCTGCTGTAGCTGTACTATGTGTTCAACCAGAACCAAGTTATCGCCCGCTGATAACGGATGTTTTGCATTCTCTTATCCCTCTTGTGCCTATTGAACTTGGAGGGACCTTGAGAAATCCACCTCCTCACTGCTGA 1335 41.72 MKVYLLILSVLLVYLDKKPCAIWVAATPRSNHLVLSTSAPISSPSFSQISPIPSVSSAAAVFSPGTQTESEEHKTDSRKKLVIAVVVGVSVFALLLLLLCLWIFHRSHPKKFGDGEKGLALAPFLGKLGSVKTFAKRGSVSLIDYKLIEKATENFLEGNILGEGGFGRVYKAQLEDNFYVAVKKLECPAHDAEREFQNEVDLLSKIQHPNVISLLGYSSHEDSRFIVYELMDNGSLETKIHGPSHGSELTWQMRMKIALDAARGLEYLHEHCNPPVIHRDLKSSNILLDANFNAKLSDFGLAVTGGTQSRSNIKLSGTLGYVAPEYILDGKLTDKSDVYAFGVVLLELLLGRRPVEKLAPAQCQSIVTWAMPQLTDRSKLPNILDPVIKNTMDLKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVPIELGGTLRNPPPHC 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11238636 11241703 - Conep07aG0172800.1 Cone7ag1677 442273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1677 444 Gene3D Phosphorylase Kinase; domain 1 127 230 - -
Cone7ag1677 444 CDD STKc_IRAK 161 428 - -
Cone7ag1677 444 PANTHER OS01G0750732 PROTEIN 48 428 IPR050885 -
Cone7ag1677 444 Gene3D Transferase(Phosphotransferase) domain 1 231 430 - -
Cone7ag1677 444 SMART serkin_6 155 426 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1677 444 ProSiteProfiles Protein kinase domain profile. 155 426 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1677 444 FunFam probable receptor-like protein kinase At1g80640 231 430 - -
Cone7ag1677 444 ProSitePatterns Protein kinases ATP-binding region signature. 161 184 IPR017441 GO:0005524(InterPro)
Cone7ag1677 444 Pfam Protein tyrosine and serine/threonine kinase 159 392 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag1677 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag1677 444 FunFam Protein kinase superfamily protein 122 230 - -
Cone7ag1677 444 SUPERFAMILY Protein kinase-like (PK-like) 135 425 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag1122 Cone-Chr18:8136957 Cone7ag1677 Cone-Chr7:11238636 1.37E-35 dispersed
Cone7ag1677 Cone-Chr7:11238636 Cone8ag1529 Cone-Chr8:11506065 3.91E-90 dispersed
Cone11ag1000 Cone-Chr11:7992558 Cone7ag1677 Cone-Chr7:11238636 1.59E-152 transposed
Cone17ag0996 Cone-Chr17:7667225 Cone7ag1677 Cone-Chr7:11238636 7.68E-139 wgd
Cone4ag1759 Cone-Chr4:12913216 Cone7ag1677 Cone-Chr7:11238636 2.02E-257 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83072 PF00067 p450 4.00E-96 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1677 - - - 0.0