Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag1698 | ATGAAAAAAGCTCTGATTTTTGGTCATTTCATAGGCCCCATTTGGTTATCCTTTTCCATCCTCCTTTTATGTAAGCCTTCTCTGGCCAGTGAACAAAAAAGGATTCTCCCTCTGGGATTTAACGGGTCTCAAATGAACTGGATAGATAACGGTGGACTAATCCTTCTATCCAACAACTCCCTATTCGGGTTTGGATTCAACCCAACTCCAGGAGATGTCACAAAGTTTCTCCTAGTCACCATCCACATAGGCAGCTCAAGAGTAATCTGGTCTGCAAATCGCAATTCTCTTGTCTCAAATGCTGACAAGTTCTCTCTCGACGACAAGGGTAATGCTTTCTTGCAGAAAGATGGAAAGGTAGTTTGGTCAACTGATACTTCCGACAAAGGTGTTTCCGCAATGGAATTGCAGAACTCGGGAAATCTAGTCTTGCTCGGAAAAGATGGGGAAATAATCTGGCAGAGTTTTAGTCATCCAACAGATACCTTGTTATCAAACCAAGATTTTACTCAAGGTATGAGACTTGTGAGTGATATTGGAAAACATAATTTGAGCTATTTTCTCGAGATAAAATCTGGTGATATGTTTCTATACGCGGGTTTTCAATCTGATCCACAACCTTATTGGTCAATGGGAAAGGATTATAGAACAACCATTAACAAAGGTGGTGGGGTAATTTCCTCTGCTTCTATTAGTGCTAATTCATGGAGGTTCTATTCTCAAAACAGAGACTTTCTCTGGCAATTCACTATCTCGGATAATTTGAATGATCCGAATTCAACTTGGATAGCAGTTTTAGGCAAAGACGGATTAATCACTTTCTATGATATCCAAAATTCTGGGTCAAGCGTAGCTTCGTCTAATAAAATCCCCCGAGATTACTGTAGTTCTCCTTTATTTTGTGACCCGTATTTGATATGTTATAGCGACAGTAACAAATGTCAGTGCCCTTCTGCTCTCACCTCCAATTGCCAGTCTGGGATTTTTTCACCGTGTGATCGGTCCAACGGTCCTACTGAGCTCGTGAATGCTGGGGCCCAGCTCGGATATTTTGCACTCGGATTCGTTTCTCCGTTTTCAAAAACGCATTTGGACGGCTGCAAAAACTCTTGCATTGCTAACTGTTCTTGCCTTGCTGTATTCTTCCAAACCAGTACCGGAAATTGTTTTCTCTTTGACAATATCGGTAGTTTTCAGAATTCCCAAAACGGGTCTGACTTTGTTTCATTTGTCAAGGTGTTGAGTGGAAACAGTGGGGCTAGTTCTGGAAAGGGCAAAAATCGGTTTCCTTTTGTCGTGATCATAGTTGTTTGTACAGTTCTTGTCATATGTGGCCTAGTTTATGCTGGATTTCATTACCTCTATAAAAAGAAGAGATTTTCAGAAAATCTAGACAATTCCGAAGATGATATCTTGGAGGGAATAACTGGGGTGCCAATACGTTTTACTTACCACGAGCTTCAAACTGCTACTAACAATTTTTCTGTAAAGCTCGGTCAAGGCGGGTTTGGCTCGGTTTATCAAGGCAGTCTTCAGGATGGGACCCGTGTGGCTGTAAAGAAATTGGAAGGAATTGGTCAAGGGAAGAAAGAGTTCCGAGCTGAGGTCAGTATAATAGGAAGCATCCATCATGTTCATTTGGTTCGCCTTAAAGGCTTTTGTGCGGAAGGAACTCATCGGCTTCTAGCTTATGAGTACATGGAAAACGGGTCGTTAGATAAATGGATTTTCAAGAAGAATCACTCGGGAAATTTTCTGTTGGATTGGGATATGAGATTTAACATAGCGTTAGGGACGGCGAAAGGACTGGCTTATCTCCATGAAGATTGTGATTCTAAGATTATTCATTGTGACATCAAGCCGGAAAATGTTCTTCTTGACGAAAACTATGAGGCTAAAGTGTCAGACTTTGGTTTAGCTAAGCTCATGACTAGAGAACAAAGCCATGTCTTTACTACACTAAGGGGAACAAGAGGGTACCTAGCACCGGAGTGGATTATGAGTTACGCGATTTCCGAGAAAAGCGATGTGTATAGCTACGGGATGGTTTTGTTGGAAATAATTGGGGGAAGGAAAAATTTTGACCCGACGGAAACTTCTGAAAAGTCTTATTTCCCGTCCTATGCCTTCAAGATGATTGAAGAAGGGAAACTAAGGCACATTTTGGACTCTAAGTTGCCCATAAATGAGAATGATGCTCGAGTTTTTACGGCAATCAAGGTTGCCTTGTGGTGTATACAAGAAGACATGGGCCTTCGACCACCAATGACCAAGGTTGTTCAAATGCTCGAAGGCTTATCAACTGCTCCTCAACCGCCGCTTTCTTCCCCTCTCGGGTCTAGAATGTATTCCAGTTTCTTTAAGTCGAGTAGCGAAGGGGGAACATCTTCTGGGCCGTCGGATTGTAACAGTGATGCTTATCAGTCTGCTGTTCAACTCTCCGGGCCTAGATAG | 2454 | 42.18 | MKKALIFGHFIGPIWLSFSILLLCKPSLASEQKRILPLGFNGSQMNWIDNGGLILLSNNSLFGFGFNPTPGDVTKFLLVTIHIGSSRVIWSANRNSLVSNADKFSLDDKGNAFLQKDGKVVWSTDTSDKGVSAMELQNSGNLVLLGKDGEIIWQSFSHPTDTLLSNQDFTQGMRLVSDIGKHNLSYFLEIKSGDMFLYAGFQSDPQPYWSMGKDYRTTINKGGGVISSASISANSWRFYSQNRDFLWQFTISDNLNDPNSTWIAVLGKDGLITFYDIQNSGSSVASSNKIPRDYCSSPLFCDPYLICYSDSNKCQCPSALTSNCQSGIFSPCDRSNGPTELVNAGAQLGYFALGFVSPFSKTHLDGCKNSCIANCSCLAVFFQTSTGNCFLFDNIGSFQNSQNGSDFVSFVKVLSGNSGASSGKGKNRFPFVVIIVVCTVLVICGLVYAGFHYLYKKKRFSENLDNSEDDILEGITGVPIRFTYHELQTATNNFSVKLGQGGFGSVYQGSLQDGTRVAVKKLEGIGQGKKEFRAEVSIIGSIHHVHLVRLKGFCAEGTHRLLAYEYMENGSLDKWIFKKNHSGNFLLDWDMRFNIALGTAKGLAYLHEDCDSKIIHCDIKPENVLLDENYEAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWIMSYAISEKSDVYSYGMVLLEIIGGRKNFDPTETSEKSYFPSYAFKMIEEGKLRHILDSKLPINENDARVFTAIKVALWCIQEDMGLRPPMTKVVQMLEGLSTAPQPPLSSPLGSRMYSSFFKSSSEGGTSSGPSDCNSDAYQSAVQLSGPR | 817 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 11318915 | 11322187 | + | Conep07aG0174900.1 | Cone7ag1698 | 442294 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag1698 | 817 | CDD | B_lectin | 55 | 159 | IPR001480 | - | |
Cone7ag1698 | 817 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 47 | 775 | IPR051343 | - | |
Cone7ag1698 | 817 | MobiDBLite | consensus disorder prediction | 788 | 817 | - | - | |
Cone7ag1698 | 817 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 614 | 626 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone7ag1698 | 817 | CDD | PAN_AP_plant | 364 | 413 | - | - | |
Cone7ag1698 | 817 | FunFam | serine/threonine-protein kinase PBS1-like | 460 | 566 | - | - | |
Cone7ag1698 | 817 | Gene3D | Phosphorylase Kinase; domain 1 | 456 | 566 | - | - | |
Cone7ag1698 | 817 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 87 | 212 | IPR036426 | - | |
Cone7ag1698 | 817 | Gene3D | - | 46 | 158 | IPR036426 | - | |
Cone7ag1698 | 817 | Pfam | D-mannose binding lectin | 88 | 169 | IPR001480 | - | |
Cone7ag1698 | 817 | ProSitePatterns | Protein kinases ATP-binding region signature. | 498 | 521 | IPR017441 | GO:0005524(InterPro) | |
Cone7ag1698 | 817 | Gene3D | Transferase(Phosphotransferase) domain 1 | 567 | 772 | - | - | |
Cone7ag1698 | 817 | Gene3D | Hepatocyte Growth Factor | 348 | 427 | - | - | |
Cone7ag1698 | 817 | SUPERFAMILY | Quinoprotein alcohol dehydrogenase-like | 48 | 331 | IPR011047 | - | |
Cone7ag1698 | 817 | SMART | blect_4 | 46 | 159 | IPR001480 | - | |
Cone7ag1698 | 817 | SMART | serkin_6 | 492 | 763 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag1698 | 817 | SUPERFAMILY | Protein kinase-like (PK-like) | 475 | 764 | IPR011009 | - | |
Cone7ag1698 | 817 | CDD | STKc_IRAK | 498 | 766 | - | - | |
Cone7ag1698 | 817 | ProSiteProfiles | Bulb-type lectin domain profile. | 40 | 157 | IPR001480 | - | |
Cone7ag1698 | 817 | PIRSF | SRK | 11 | 814 | IPR024171 | GO:0004674(InterPro) | |
Cone7ag1698 | 817 | Pfam | Protein kinase domain | 496 | 761 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag1698 | 817 | FunFam | S-receptor-like kinase 5 | 567 | 771 | - | - | |
Cone7ag1698 | 817 | ProSiteProfiles | Protein kinase domain profile. | 492 | 774 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone4ag1385 | Cone-Chr4:11200758 | Cone7ag1698 | Cone-Chr7:11318915 | 3.01E-146 | dispersed | |
Cone4ag1790 | Cone-Chr4:13026499 | Cone7ag1698 | Cone-Chr7:11318915 | 2.35E-226 | dispersed | |
Cone5ag0678 | Cone-Chr5:2889866 | Cone7ag1698 | Cone-Chr7:11318915 | 1.51E-76 | dispersed | |
Cone5ag0905 | Cone-Chr5:3880989 | Cone7ag1698 | Cone-Chr7:11318915 | 4.22E-132 | dispersed | |
Cone7ag1698 | Cone-Chr7:11318915 | Cone8ag1515 | Cone-Chr8:11438195 | 4.09E-103 | dispersed | |
Cone4ag0691 | Cone-Chr4:3456765 | Cone7ag1698 | Cone-Chr7:11318915 | 2.70E-94 | transposed | |
Cone16ag0642 | Cone-Chr16:7978153 | Cone7ag1698 | Cone-Chr7:11318915 | 1.06E-267 | wgd | |
Cone17ag0223 | Cone-Chr17:1057505 | Cone7ag1698 | Cone-Chr7:11318915 | 2.96E-70 | wgd | |
Cone2ag0367 | Cone-Chr2:1935843 | Cone7ag1698 | Cone-Chr7:11318915 | 1.35E-251 | wgd | |
Cone20ag1188 | Cone-Chr20:7970444 | Cone7ag1698 | Cone-Chr7:11318915 | 2.83E-297 | wgd | |
Cone4ag1783 | Cone-Chr4:12996990 | Cone7ag1698 | Cone-Chr7:11318915 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
83073 | PF00076 | RRM_1 | 4.00E-12 | CL0221 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag1698 | - | - | - | 0.0 |