Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1698 ATGAAAAAAGCTCTGATTTTTGGTCATTTCATAGGCCCCATTTGGTTATCCTTTTCCATCCTCCTTTTATGTAAGCCTTCTCTGGCCAGTGAACAAAAAAGGATTCTCCCTCTGGGATTTAACGGGTCTCAAATGAACTGGATAGATAACGGTGGACTAATCCTTCTATCCAACAACTCCCTATTCGGGTTTGGATTCAACCCAACTCCAGGAGATGTCACAAAGTTTCTCCTAGTCACCATCCACATAGGCAGCTCAAGAGTAATCTGGTCTGCAAATCGCAATTCTCTTGTCTCAAATGCTGACAAGTTCTCTCTCGACGACAAGGGTAATGCTTTCTTGCAGAAAGATGGAAAGGTAGTTTGGTCAACTGATACTTCCGACAAAGGTGTTTCCGCAATGGAATTGCAGAACTCGGGAAATCTAGTCTTGCTCGGAAAAGATGGGGAAATAATCTGGCAGAGTTTTAGTCATCCAACAGATACCTTGTTATCAAACCAAGATTTTACTCAAGGTATGAGACTTGTGAGTGATATTGGAAAACATAATTTGAGCTATTTTCTCGAGATAAAATCTGGTGATATGTTTCTATACGCGGGTTTTCAATCTGATCCACAACCTTATTGGTCAATGGGAAAGGATTATAGAACAACCATTAACAAAGGTGGTGGGGTAATTTCCTCTGCTTCTATTAGTGCTAATTCATGGAGGTTCTATTCTCAAAACAGAGACTTTCTCTGGCAATTCACTATCTCGGATAATTTGAATGATCCGAATTCAACTTGGATAGCAGTTTTAGGCAAAGACGGATTAATCACTTTCTATGATATCCAAAATTCTGGGTCAAGCGTAGCTTCGTCTAATAAAATCCCCCGAGATTACTGTAGTTCTCCTTTATTTTGTGACCCGTATTTGATATGTTATAGCGACAGTAACAAATGTCAGTGCCCTTCTGCTCTCACCTCCAATTGCCAGTCTGGGATTTTTTCACCGTGTGATCGGTCCAACGGTCCTACTGAGCTCGTGAATGCTGGGGCCCAGCTCGGATATTTTGCACTCGGATTCGTTTCTCCGTTTTCAAAAACGCATTTGGACGGCTGCAAAAACTCTTGCATTGCTAACTGTTCTTGCCTTGCTGTATTCTTCCAAACCAGTACCGGAAATTGTTTTCTCTTTGACAATATCGGTAGTTTTCAGAATTCCCAAAACGGGTCTGACTTTGTTTCATTTGTCAAGGTGTTGAGTGGAAACAGTGGGGCTAGTTCTGGAAAGGGCAAAAATCGGTTTCCTTTTGTCGTGATCATAGTTGTTTGTACAGTTCTTGTCATATGTGGCCTAGTTTATGCTGGATTTCATTACCTCTATAAAAAGAAGAGATTTTCAGAAAATCTAGACAATTCCGAAGATGATATCTTGGAGGGAATAACTGGGGTGCCAATACGTTTTACTTACCACGAGCTTCAAACTGCTACTAACAATTTTTCTGTAAAGCTCGGTCAAGGCGGGTTTGGCTCGGTTTATCAAGGCAGTCTTCAGGATGGGACCCGTGTGGCTGTAAAGAAATTGGAAGGAATTGGTCAAGGGAAGAAAGAGTTCCGAGCTGAGGTCAGTATAATAGGAAGCATCCATCATGTTCATTTGGTTCGCCTTAAAGGCTTTTGTGCGGAAGGAACTCATCGGCTTCTAGCTTATGAGTACATGGAAAACGGGTCGTTAGATAAATGGATTTTCAAGAAGAATCACTCGGGAAATTTTCTGTTGGATTGGGATATGAGATTTAACATAGCGTTAGGGACGGCGAAAGGACTGGCTTATCTCCATGAAGATTGTGATTCTAAGATTATTCATTGTGACATCAAGCCGGAAAATGTTCTTCTTGACGAAAACTATGAGGCTAAAGTGTCAGACTTTGGTTTAGCTAAGCTCATGACTAGAGAACAAAGCCATGTCTTTACTACACTAAGGGGAACAAGAGGGTACCTAGCACCGGAGTGGATTATGAGTTACGCGATTTCCGAGAAAAGCGATGTGTATAGCTACGGGATGGTTTTGTTGGAAATAATTGGGGGAAGGAAAAATTTTGACCCGACGGAAACTTCTGAAAAGTCTTATTTCCCGTCCTATGCCTTCAAGATGATTGAAGAAGGGAAACTAAGGCACATTTTGGACTCTAAGTTGCCCATAAATGAGAATGATGCTCGAGTTTTTACGGCAATCAAGGTTGCCTTGTGGTGTATACAAGAAGACATGGGCCTTCGACCACCAATGACCAAGGTTGTTCAAATGCTCGAAGGCTTATCAACTGCTCCTCAACCGCCGCTTTCTTCCCCTCTCGGGTCTAGAATGTATTCCAGTTTCTTTAAGTCGAGTAGCGAAGGGGGAACATCTTCTGGGCCGTCGGATTGTAACAGTGATGCTTATCAGTCTGCTGTTCAACTCTCCGGGCCTAGATAG 2454 42.18 MKKALIFGHFIGPIWLSFSILLLCKPSLASEQKRILPLGFNGSQMNWIDNGGLILLSNNSLFGFGFNPTPGDVTKFLLVTIHIGSSRVIWSANRNSLVSNADKFSLDDKGNAFLQKDGKVVWSTDTSDKGVSAMELQNSGNLVLLGKDGEIIWQSFSHPTDTLLSNQDFTQGMRLVSDIGKHNLSYFLEIKSGDMFLYAGFQSDPQPYWSMGKDYRTTINKGGGVISSASISANSWRFYSQNRDFLWQFTISDNLNDPNSTWIAVLGKDGLITFYDIQNSGSSVASSNKIPRDYCSSPLFCDPYLICYSDSNKCQCPSALTSNCQSGIFSPCDRSNGPTELVNAGAQLGYFALGFVSPFSKTHLDGCKNSCIANCSCLAVFFQTSTGNCFLFDNIGSFQNSQNGSDFVSFVKVLSGNSGASSGKGKNRFPFVVIIVVCTVLVICGLVYAGFHYLYKKKRFSENLDNSEDDILEGITGVPIRFTYHELQTATNNFSVKLGQGGFGSVYQGSLQDGTRVAVKKLEGIGQGKKEFRAEVSIIGSIHHVHLVRLKGFCAEGTHRLLAYEYMENGSLDKWIFKKNHSGNFLLDWDMRFNIALGTAKGLAYLHEDCDSKIIHCDIKPENVLLDENYEAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWIMSYAISEKSDVYSYGMVLLEIIGGRKNFDPTETSEKSYFPSYAFKMIEEGKLRHILDSKLPINENDARVFTAIKVALWCIQEDMGLRPPMTKVVQMLEGLSTAPQPPLSSPLGSRMYSSFFKSSSEGGTSSGPSDCNSDAYQSAVQLSGPR 817
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11318915 11322187 + Conep07aG0174900.1 Cone7ag1698 442294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1698 817 CDD B_lectin 55 159 IPR001480 -
Cone7ag1698 817 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 47 775 IPR051343 -
Cone7ag1698 817 MobiDBLite consensus disorder prediction 788 817 - -
Cone7ag1698 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag1698 817 CDD PAN_AP_plant 364 413 - -
Cone7ag1698 817 FunFam serine/threonine-protein kinase PBS1-like 460 566 - -
Cone7ag1698 817 Gene3D Phosphorylase Kinase; domain 1 456 566 - -
Cone7ag1698 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 87 212 IPR036426 -
Cone7ag1698 817 Gene3D - 46 158 IPR036426 -
Cone7ag1698 817 Pfam D-mannose binding lectin 88 169 IPR001480 -
Cone7ag1698 817 ProSitePatterns Protein kinases ATP-binding region signature. 498 521 IPR017441 GO:0005524(InterPro)
Cone7ag1698 817 Gene3D Transferase(Phosphotransferase) domain 1 567 772 - -
Cone7ag1698 817 Gene3D Hepatocyte Growth Factor 348 427 - -
Cone7ag1698 817 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 48 331 IPR011047 -
Cone7ag1698 817 SMART blect_4 46 159 IPR001480 -
Cone7ag1698 817 SMART serkin_6 492 763 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1698 817 SUPERFAMILY Protein kinase-like (PK-like) 475 764 IPR011009 -
Cone7ag1698 817 CDD STKc_IRAK 498 766 - -
Cone7ag1698 817 ProSiteProfiles Bulb-type lectin domain profile. 40 157 IPR001480 -
Cone7ag1698 817 PIRSF SRK 11 814 IPR024171 GO:0004674(InterPro)
Cone7ag1698 817 Pfam Protein kinase domain 496 761 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1698 817 FunFam S-receptor-like kinase 5 567 771 - -
Cone7ag1698 817 ProSiteProfiles Protein kinase domain profile. 492 774 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1385 Cone-Chr4:11200758 Cone7ag1698 Cone-Chr7:11318915 3.01E-146 dispersed
Cone4ag1790 Cone-Chr4:13026499 Cone7ag1698 Cone-Chr7:11318915 2.35E-226 dispersed
Cone5ag0678 Cone-Chr5:2889866 Cone7ag1698 Cone-Chr7:11318915 1.51E-76 dispersed
Cone5ag0905 Cone-Chr5:3880989 Cone7ag1698 Cone-Chr7:11318915 4.22E-132 dispersed
Cone7ag1698 Cone-Chr7:11318915 Cone8ag1515 Cone-Chr8:11438195 4.09E-103 dispersed
Cone4ag0691 Cone-Chr4:3456765 Cone7ag1698 Cone-Chr7:11318915 2.70E-94 transposed
Cone16ag0642 Cone-Chr16:7978153 Cone7ag1698 Cone-Chr7:11318915 1.06E-267 wgd
Cone17ag0223 Cone-Chr17:1057505 Cone7ag1698 Cone-Chr7:11318915 2.96E-70 wgd
Cone2ag0367 Cone-Chr2:1935843 Cone7ag1698 Cone-Chr7:11318915 1.35E-251 wgd
Cone20ag1188 Cone-Chr20:7970444 Cone7ag1698 Cone-Chr7:11318915 2.83E-297 wgd
Cone4ag1783 Cone-Chr4:12996990 Cone7ag1698 Cone-Chr7:11318915 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83073 PF00076 RRM_1 4.00E-12 CL0221 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1698 - - - 0.0