Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag1708 | ATGGAAGCGAATGCGGGAATGGTGGCTGGATCTTACAAGAGGAACGAGCTCGTTCGGATTCGCCATGATTCTGATAGCGGGCCCAAACCTTTGAAGCATTTGAATGGGCAAATATGTCAAATTTGTGGCGATACAGTTGGACTTACAGTCACTGGAGATGTGTTTGTTGCTTGCAATGAATGTGCTTTCCCAGTCTGTAGGCCTTGTTACGAGTACGAGCGAAAAGAAGGCAATCAATCTTGCCCCCAATGCAAGACTAGATATAAAAGGCACAAAGGGAGTCCTCGAGTTGATGGTGATGATGATGAGGATGATGTTGATGATATAGAGAATGAGTTCAATTATGGTCAAGGTAATAGTAAGCCTAGAAGGCAATGGCAGGGAGAAGATGATCTCTCTTCTTCTGCAAGGCACGAGTCTCAACAACCAATCCCCCTTCTCACAAACGGGCAACCAGTGTCAGGTGAATTTCCCTGTGCTACACCTGACAACCAATCTGTGAGAACTACATCGGGTCCTTTGGGTCCTTCTGAAAAACATTCTCATTCACCTTATATTGATCCAAGGCAGCCAGTTCCTGTGAGAATTGTGGACCCATCAAAGGACTTGAACTCCTATGGCCTTGGAAATGTTGACTGGAAGGAAAGAGTCGAAGGCTGGAAACTCAAACAGGATAAGAACATAATGAACATGACGGGTAGGTACTCTGAAGGAAAGGTAGGTGATATTGAAGGCACTGGATCAAATGGAGAAGAACTCCAAATGGCTGATGATGTTAGACAACCATTGAGCCGAATAGTCCCTATTGACTCTTCTCAACTTACCCCATATCGGGCTGTAATCATACTCCGTCTAATTATCCTTGGCTTCTTCCTTCAATACCGTGTTACACACCCTGTGAAGGATGCTTACCCTTTATGGTTAACATCTGTTATTTGTGAGATTTGGTTTGCCTTATCCTGGCTCCTCGATCAATTCCCAAAATGGTATCCCATCAATAGAGAGACCTATCTGGACCGGCTCACATTGAGATATGATAGGGATGGAGAGCCATCTCAATTAGCTCCTGTGGATGTTTTTGTCAGTACAGTGGACCCACTGAAAGAGCCTCCTCTTGTGACAGCAAATACTGTTCTTTCCATACTTGCTGTCGATTACCCAGTTGACAAGGTCTCTTGCTATGTATCAGATGATGGGTCAGCAATGTTGACTTTTGAAGCCCTATCTGAAACTGCAGAATTTGCGAGGAAGTGGGTTCCCTTTTGCAAGAAGCACAACATTGAGCCAAGGGCACCTGAGTTTTATTTTCAACAGAAAATAGACTATTTGAAGGACAAGATACAACCTTCTTTTGTCAAAGAGCGTCGAGCAATGAAGAGGGAGTATGAAGAATTCAAGGTTCGGATAAATGCTCTTGTAGCCAAAGCACAGAAGATGCCGGAAGAAGGTTGGACTATGCAGGACGGCACTCCATGGCCTGGAAATAATCCTAGGGATCATCCGGGAATGATCCAGGTCTTCTTGGGTCATAGTGGTGGGCTTGATACCGATGGAAATGAACTACCTCGACTTGTTTATGTTTCTCGTGAGAAGCGACCTGGCTTCCAGCATCACAAGAAGGCCGGAGCTATGAATGCTTTGATTCGAGTTTCAGCTGTTCTTACCAATGGAGCTTATCTTTTGAACGTGGATTGTGATCACTACTTCAATAACAGCAAAGCTCTTAAAGAAGCCATGTGTTTCATGATGGACCCCGGCTATGGAAAGAAGACATGCTATGTCCAATTCCCACAGCGTTTCGATGGCATTGATTTGCACGATCGATATGCCAATCGCAATATCGTCTTCTTTGATATCAACTTGAAAGGGTTGGATGGCATTCAAGGTCCTGTCTATGTGGGAACTGGTTGTTGTTTCAACAGGCAAGCTCTATATGGGTATGATCCAGTTTTGACTGAGGAAGATTTGGAACCAAACATTGTAATCAAGAGTTGTTGTGGTCCAAGGAAGAAAAGTAGGGGTGGCAATAAGAAGTACGTTGACAAAAAGAGGGCTGTCAAAAGAACCGAATCCACCATCCCCATCTTTAACATGGAAGATATTGAAGAGGGAGTAGAAGGACATGATGATGAGAGATCACTCCTTATGTCTCAAAAGAGCTTAGAGAAGCGATTCGGACAATCTCCGGTTTTTATTGCAGCCACTTTCATGGAACAAGGAGGCCTTCCACCTTCAACCAATCCTGCTACTCTTCTAAAGGAAGCAATCCATGTTATCAGCTGTGGATATGAAGACAAAACAGAGTGGGGAAAAGAGATTGGATGGATCTATGGTTCTGTGACAGAAGATATTTTAACCGGGTTTAAAATGCATGCTCGTGGTTGGATTTCAATCTACTGCATGCCGCCCCGACCCGCATTCAAAGGGTCCGCCCCCATAAATCTTTCCGATCGATTGAACCAAGTGCTTCGATGGGCTTTGGGTTCAATTGAGATCTTGCTTAGCAGGCATTGCCCCATATGGTATGGCTACCAAGGCAAACTGAGGCTTCTGGAGAGATTAGCTTACATCAATACTATAGTCTACCCTCTTACCTCCATTCCACTACTTGCATATTGTACACTTCCTGCTTTCTGCCTCTTAACCAATAAATTCATCATCCCAGAGATAAGCAACTATGCTAGTATGTGGTTTATCCTTCTCTTTATCTCTATTTTTGCAACGGGTATTCTCGAGCTTAGATGGAGTGGAGTTAGTATCGAAGATTGGTGGAGAAACGAACAGTTTTGGGTCATAGGAGGTACTTCAGCCCATCTGTTTGCCGTTTTCCAAGGGCTCTTAAAAGTACTTGCTGGAATTGACACCAATTTCACTGTCACCTCAAAATCATCAGATGATGATGGGGACTTTGCTGAGCTTTATGTGTTCAAATGGACCTCTCTTCTGATCCCACCCACTACCGTTCTTCTCATGAACATGGTGGGTATAGTGGCTGGTGTTTCTTATGCTATAAATAGTGGGTACCAGTCGTGGGGTCCCCTTTTCGGTAAGCTGTTCTTCGCCATGTGGGTTGTCGTACATTTGTATCCCTTCTTGAAGGGTTTGTTGGGCCGTCAAAACCGTACCCCAACAATTGTTATTGTGTGGTCCATTCTTCTTGCTTCGATTTTCTCGTTGCTTTGGGTTCGGATTGATCCCTTTACTTCCGGGACCAATAAAGCTTCTGCAGGTCAATGCGGGGTCAATTGCTAA | 3252 | 44.34 | MEANAGMVAGSYKRNELVRIRHDSDSGPKPLKHLNGQICQICGDTVGLTVTGDVFVACNECAFPVCRPCYEYERKEGNQSCPQCKTRYKRHKGSPRVDGDDDEDDVDDIENEFNYGQGNSKPRRQWQGEDDLSSSARHESQQPIPLLTNGQPVSGEFPCATPDNQSVRTTSGPLGPSEKHSHSPYIDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQDKNIMNMTGRYSEGKVGDIEGTGSNGEELQMADDVRQPLSRIVPIDSSQLTPYRAVIILRLIILGFFLQYRVTHPVKDAYPLWLTSVICEIWFALSWLLDQFPKWYPINRETYLDRLTLRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFQQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPGYGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNIVIKSCCGPRKKSRGGNKKYVDKKRAVKRTESTIPIFNMEDIEEGVEGHDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGLPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYQGKLRLLERLAYINTIVYPLTSIPLLAYCTLPAFCLLTNKFIIPEISNYASMWFILLFISIFATGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKSSDDDGDFAELYVFKWTSLLIPPTTVLLMNMVGIVAGVSYAINSGYQSWGPLFGKLFFAMWVVVHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDPFTSGTNKASAGQCGVNC | 1083 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 11366195 | 11371308 | - | Conep07aG0176100.1 | Cone7ag1708 | 442304 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag1708 | 1083 | MobiDBLite | consensus disorder prediction | 81 | 192 | - | - | |
Cone7ag1708 | 1083 | Pfam | Cellulose synthase | 357 | 1074 | IPR005150 | GO:0016020(InterPro)|GO:0016760(InterPro)|GO:0030244(InterPro) | |
Cone7ag1708 | 1083 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 515 | 660 | IPR029044 | - | |
Cone7ag1708 | 1083 | SUPERFAMILY | RING/U-box | 22 | 111 | - | - | |
Cone7ag1708 | 1083 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 21 | 112 | IPR013083 | - | |
Cone7ag1708 | 1083 | CDD | mRING-HC-C4C4_CesA | 37 | 87 | - | - | |
Cone7ag1708 | 1083 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 277 | 1052 | - | GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0009833(PANTHER)|GO:0016759(PANTHER)|GO:0030244(PANTHER) | |
Cone7ag1708 | 1083 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 375 | 657 | IPR029044 | - | |
Cone7ag1708 | 1083 | MobiDBLite | consensus disorder prediction | 137 | 177 | - | - | |
Cone7ag1708 | 1083 | FunFam | Cellulose synthase | 474 | 648 | - | - | |
Cone7ag1708 | 1083 | ProSiteProfiles | Zinc finger RING-type profile. | 39 | 85 | IPR001841 | - | |
Cone7ag1708 | 1083 | Coils | Coil | 455 | 475 | - | - | |
Cone7ag1708 | 1083 | FunFam | Cellulose synthase | 21 | 112 | - | - | |
Cone7ag1708 | 1083 | Pfam | Zinc-binding RING-finger | 29 | 106 | IPR027934 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone3ag1327 | Cone-Chr3:32211842 | Cone7ag1708 | Cone-Chr7:11366195 | 3.10E-134 | dispersed | |
Cone7ag1708 | Cone-Chr7:11366195 | Cone9ag1255 | Cone-Chr9:9240088 | 0 | dispersed | |
Cone4ag1800 | Cone-Chr4:13064719 | Cone7ag1708 | Cone-Chr7:11366195 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag1708 | K10999 | - | vvi:100254408 | 2108.57 |