Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1708 ATGGAAGCGAATGCGGGAATGGTGGCTGGATCTTACAAGAGGAACGAGCTCGTTCGGATTCGCCATGATTCTGATAGCGGGCCCAAACCTTTGAAGCATTTGAATGGGCAAATATGTCAAATTTGTGGCGATACAGTTGGACTTACAGTCACTGGAGATGTGTTTGTTGCTTGCAATGAATGTGCTTTCCCAGTCTGTAGGCCTTGTTACGAGTACGAGCGAAAAGAAGGCAATCAATCTTGCCCCCAATGCAAGACTAGATATAAAAGGCACAAAGGGAGTCCTCGAGTTGATGGTGATGATGATGAGGATGATGTTGATGATATAGAGAATGAGTTCAATTATGGTCAAGGTAATAGTAAGCCTAGAAGGCAATGGCAGGGAGAAGATGATCTCTCTTCTTCTGCAAGGCACGAGTCTCAACAACCAATCCCCCTTCTCACAAACGGGCAACCAGTGTCAGGTGAATTTCCCTGTGCTACACCTGACAACCAATCTGTGAGAACTACATCGGGTCCTTTGGGTCCTTCTGAAAAACATTCTCATTCACCTTATATTGATCCAAGGCAGCCAGTTCCTGTGAGAATTGTGGACCCATCAAAGGACTTGAACTCCTATGGCCTTGGAAATGTTGACTGGAAGGAAAGAGTCGAAGGCTGGAAACTCAAACAGGATAAGAACATAATGAACATGACGGGTAGGTACTCTGAAGGAAAGGTAGGTGATATTGAAGGCACTGGATCAAATGGAGAAGAACTCCAAATGGCTGATGATGTTAGACAACCATTGAGCCGAATAGTCCCTATTGACTCTTCTCAACTTACCCCATATCGGGCTGTAATCATACTCCGTCTAATTATCCTTGGCTTCTTCCTTCAATACCGTGTTACACACCCTGTGAAGGATGCTTACCCTTTATGGTTAACATCTGTTATTTGTGAGATTTGGTTTGCCTTATCCTGGCTCCTCGATCAATTCCCAAAATGGTATCCCATCAATAGAGAGACCTATCTGGACCGGCTCACATTGAGATATGATAGGGATGGAGAGCCATCTCAATTAGCTCCTGTGGATGTTTTTGTCAGTACAGTGGACCCACTGAAAGAGCCTCCTCTTGTGACAGCAAATACTGTTCTTTCCATACTTGCTGTCGATTACCCAGTTGACAAGGTCTCTTGCTATGTATCAGATGATGGGTCAGCAATGTTGACTTTTGAAGCCCTATCTGAAACTGCAGAATTTGCGAGGAAGTGGGTTCCCTTTTGCAAGAAGCACAACATTGAGCCAAGGGCACCTGAGTTTTATTTTCAACAGAAAATAGACTATTTGAAGGACAAGATACAACCTTCTTTTGTCAAAGAGCGTCGAGCAATGAAGAGGGAGTATGAAGAATTCAAGGTTCGGATAAATGCTCTTGTAGCCAAAGCACAGAAGATGCCGGAAGAAGGTTGGACTATGCAGGACGGCACTCCATGGCCTGGAAATAATCCTAGGGATCATCCGGGAATGATCCAGGTCTTCTTGGGTCATAGTGGTGGGCTTGATACCGATGGAAATGAACTACCTCGACTTGTTTATGTTTCTCGTGAGAAGCGACCTGGCTTCCAGCATCACAAGAAGGCCGGAGCTATGAATGCTTTGATTCGAGTTTCAGCTGTTCTTACCAATGGAGCTTATCTTTTGAACGTGGATTGTGATCACTACTTCAATAACAGCAAAGCTCTTAAAGAAGCCATGTGTTTCATGATGGACCCCGGCTATGGAAAGAAGACATGCTATGTCCAATTCCCACAGCGTTTCGATGGCATTGATTTGCACGATCGATATGCCAATCGCAATATCGTCTTCTTTGATATCAACTTGAAAGGGTTGGATGGCATTCAAGGTCCTGTCTATGTGGGAACTGGTTGTTGTTTCAACAGGCAAGCTCTATATGGGTATGATCCAGTTTTGACTGAGGAAGATTTGGAACCAAACATTGTAATCAAGAGTTGTTGTGGTCCAAGGAAGAAAAGTAGGGGTGGCAATAAGAAGTACGTTGACAAAAAGAGGGCTGTCAAAAGAACCGAATCCACCATCCCCATCTTTAACATGGAAGATATTGAAGAGGGAGTAGAAGGACATGATGATGAGAGATCACTCCTTATGTCTCAAAAGAGCTTAGAGAAGCGATTCGGACAATCTCCGGTTTTTATTGCAGCCACTTTCATGGAACAAGGAGGCCTTCCACCTTCAACCAATCCTGCTACTCTTCTAAAGGAAGCAATCCATGTTATCAGCTGTGGATATGAAGACAAAACAGAGTGGGGAAAAGAGATTGGATGGATCTATGGTTCTGTGACAGAAGATATTTTAACCGGGTTTAAAATGCATGCTCGTGGTTGGATTTCAATCTACTGCATGCCGCCCCGACCCGCATTCAAAGGGTCCGCCCCCATAAATCTTTCCGATCGATTGAACCAAGTGCTTCGATGGGCTTTGGGTTCAATTGAGATCTTGCTTAGCAGGCATTGCCCCATATGGTATGGCTACCAAGGCAAACTGAGGCTTCTGGAGAGATTAGCTTACATCAATACTATAGTCTACCCTCTTACCTCCATTCCACTACTTGCATATTGTACACTTCCTGCTTTCTGCCTCTTAACCAATAAATTCATCATCCCAGAGATAAGCAACTATGCTAGTATGTGGTTTATCCTTCTCTTTATCTCTATTTTTGCAACGGGTATTCTCGAGCTTAGATGGAGTGGAGTTAGTATCGAAGATTGGTGGAGAAACGAACAGTTTTGGGTCATAGGAGGTACTTCAGCCCATCTGTTTGCCGTTTTCCAAGGGCTCTTAAAAGTACTTGCTGGAATTGACACCAATTTCACTGTCACCTCAAAATCATCAGATGATGATGGGGACTTTGCTGAGCTTTATGTGTTCAAATGGACCTCTCTTCTGATCCCACCCACTACCGTTCTTCTCATGAACATGGTGGGTATAGTGGCTGGTGTTTCTTATGCTATAAATAGTGGGTACCAGTCGTGGGGTCCCCTTTTCGGTAAGCTGTTCTTCGCCATGTGGGTTGTCGTACATTTGTATCCCTTCTTGAAGGGTTTGTTGGGCCGTCAAAACCGTACCCCAACAATTGTTATTGTGTGGTCCATTCTTCTTGCTTCGATTTTCTCGTTGCTTTGGGTTCGGATTGATCCCTTTACTTCCGGGACCAATAAAGCTTCTGCAGGTCAATGCGGGGTCAATTGCTAA 3252 44.34 MEANAGMVAGSYKRNELVRIRHDSDSGPKPLKHLNGQICQICGDTVGLTVTGDVFVACNECAFPVCRPCYEYERKEGNQSCPQCKTRYKRHKGSPRVDGDDDEDDVDDIENEFNYGQGNSKPRRQWQGEDDLSSSARHESQQPIPLLTNGQPVSGEFPCATPDNQSVRTTSGPLGPSEKHSHSPYIDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQDKNIMNMTGRYSEGKVGDIEGTGSNGEELQMADDVRQPLSRIVPIDSSQLTPYRAVIILRLIILGFFLQYRVTHPVKDAYPLWLTSVICEIWFALSWLLDQFPKWYPINRETYLDRLTLRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFQQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPGYGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNIVIKSCCGPRKKSRGGNKKYVDKKRAVKRTESTIPIFNMEDIEEGVEGHDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGLPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYQGKLRLLERLAYINTIVYPLTSIPLLAYCTLPAFCLLTNKFIIPEISNYASMWFILLFISIFATGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKSSDDDGDFAELYVFKWTSLLIPPTTVLLMNMVGIVAGVSYAINSGYQSWGPLFGKLFFAMWVVVHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDPFTSGTNKASAGQCGVNC 1083
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11366195 11371308 - Conep07aG0176100.1 Cone7ag1708 442304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1708 1083 MobiDBLite consensus disorder prediction 81 192 - -
Cone7ag1708 1083 Pfam Cellulose synthase 357 1074 IPR005150 GO:0016020(InterPro)|GO:0016760(InterPro)|GO:0030244(InterPro)
Cone7ag1708 1083 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 515 660 IPR029044 -
Cone7ag1708 1083 SUPERFAMILY RING/U-box 22 111 - -
Cone7ag1708 1083 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 112 IPR013083 -
Cone7ag1708 1083 CDD mRING-HC-C4C4_CesA 37 87 - -
Cone7ag1708 1083 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 277 1052 - GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0009833(PANTHER)|GO:0016759(PANTHER)|GO:0030244(PANTHER)
Cone7ag1708 1083 SUPERFAMILY Nucleotide-diphospho-sugar transferases 375 657 IPR029044 -
Cone7ag1708 1083 MobiDBLite consensus disorder prediction 137 177 - -
Cone7ag1708 1083 FunFam Cellulose synthase 474 648 - -
Cone7ag1708 1083 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Cone7ag1708 1083 Coils Coil 455 475 - -
Cone7ag1708 1083 FunFam Cellulose synthase 21 112 - -
Cone7ag1708 1083 Pfam Zinc-binding RING-finger 29 106 IPR027934 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag1327 Cone-Chr3:32211842 Cone7ag1708 Cone-Chr7:11366195 3.10E-134 dispersed
Cone7ag1708 Cone-Chr7:11366195 Cone9ag1255 Cone-Chr9:9240088 0 dispersed
Cone4ag1800 Cone-Chr4:13064719 Cone7ag1708 Cone-Chr7:11366195 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1708 K10999 - vvi:100254408 2108.57