Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1714 ATGGCGAAGAAGAAGAACCTTTTTGTTTTTATGGATGTATCCATTGATGGCGATCCCATTGACAGAATGGTTTTTGAGCTTTTCTATGATGTTGCTCCTAAGACTGCAGAAAATTTTCGTGCACTCTGTACAGGAGAAAAGGGAGTAGGTCCTAAAACTGGAAGGGTACTGCACTACAAAGGATCTTTTTTGCATCGCATTGTTAAAGGCTCTATGGTGCAGGGTGGTGATTTCATCAAACGAGATGGGACTGTCGGAGAGAGCATATATGGAGGGAAGTTTCCAGATGAAGCACCCCGACTAAAACATGATGAAACTGGTCTTCTATCTATGGCTATCGCTGACCGTGACACCTTAGGCTCTCATTTCCTCATCACCCTTAAGGCTAATCACCATCTTGACAGGAAGTGTGTAGTATTCGGAAAGCTTGTTCAAGGACTTGAAGTATTAAAAAAGATTGAAAACTTTGGTGATGAAGATGGGACTCCTGCAGTAACAGTGAAAATCATCAATTGTGGTGAATTTAACAAGGACAAAAAGAAAGTCAAACCAAGAATGAAAAAGGATTCTTCGGATGAAGATGATGGTTATGAAGCAAAGAGGAAGGACAAGCACAAAAAATCTTCAAGAGATAAAAGGAGAAAGAGAAGAAGATACTACACATCTGAGTCAGATAGCTCTTCAGATAGTGAGTCAGACTCAGATTCTGACAGTGATTCTGACTCCGATTTGTCTGTGTCAGATGAAAGTTCTTCAAGTGATGACAGACCAAAGAAGAGAAGGGGATCCTCAAGAAGGGACAGATATAGGAGAGGGAAGAGAAGGGATAAAAGACGTGAAAAGAAGCGGAGGAGGCATGATAGAAGATCTAAGCGCAAATCCAGAAGGGCATCGGATAGTCTTACCAATACTGAGGATGAGAGTAAAAGCAAAAGTACCTCCAGTGATGATGGCCTTAATGTTCAGGGGAAAGACCATAAGTGTAAAGACTCTTCTAAGAAAAATGCTGAAAATCTCACATCTTCCCCAGAAAAGAGGGAGGAAACGGATAGGATGGAGATAGATGGAGGAAGATTTCAGAAGGAAAATGGAGAGCAGCGGAGAAATGGCACTGTGAATTCAGACAATAAGTCTGATAGAAGTGCTGATAGACAACCTGATGTAGTAGATGATCACCCAGGAAAATATAGGAATCGTAGCACAAGTCCTAAAATCGCCATGAGTAAGAGTATGAGTACTACTTCCAGGAAGAGTCTTAGCAACAGCCCTAGTGTTGGCCCAAAACAAAGTGTGAGCAAGGCTAGGAGTGTCAGTGGAAGCCCCCCTCCTTCTCCCCAAAGAAGCAGAAGTATGGACAGAAGTCCTGTTAGGGGTGGTAGCAACAGGAGCCCATCCAGGAGCATCAGCCGAAGTCCTGTAGCAGGCAGAAAAGGTAGAACCATAAGTAGAAGCCCGTTGAGAGCTAGGTCTCAAAGACGTGTTAGCCGGAGCCCAAGCCCTCTCAGGAGTCCCCTGAGAAGAAATACAAGAAGCCCGAGCAGGAGTCCTCCAAGAAGAGTTGCAAGAAGCCTAAGTAGGAGCCCCCTAAGAAGAAATACAAGAAGCCCAAGCAGGAGTCCACTGAGAAAGAATGTAAAAAGCATAAGCAGGAGTCCAGTGCGATCTTCTCGAAGGAGCTTGAGCAGAAGCTCAGGTAGGGCCCCTTCAAGGAGAAGTATAAGCCGAAGTCCAGTGCGGGCACCTATCAGAATTAGTAGTAGGAACTATTCAAGGAGCCCTAGTCCTAGACGTCGGCCTAGATCACCCCCATCTAATCGAGCAAGGAGTGAATCAAGAAGTGTTTCTCCCGACACGTCCCCCAAGCGCATCAGGAGAGGGCGCGGTTTTAGTCAGCGATATTCATATGCTCGCCGCTACAGAACCCCCTCTCTCTCTCCTCCCAGGTCTTACCGGTATAACGGTAGAAGTGAACGTGACAGATATTCAAGCTACAGGAGGTATTCCCCTAGGCGATATAGAAGCCCACCAAGAGCAAGATCTCCTATAAGGTACAGAAGCAGGAGAAGCAGGACACATTCTGTATCACGTAGCCCCCGTTACCGTCACCGTCACTACAGCCGGAGTAGAAGCCCTATTCGTAGCCGTTCTCCTGTTGAAGGTTCGAGGCCTCTTGTGTCACCTCGGGACGAGAAGCGGAGATCACTCTCCAGAAGCAGAAGCCCATCAAGGTCAAGGTCAAGTTCAAGGTCCCCTCCTCCTCGCCCTCAATCCCTCAGGCGGACTAGTAAAGATAGGTCGAGCTCGTCTTCTCGAAGCCCAAATGGGAAGAAGGGCCTTGTATCTTATGGCGACGGTTCTCCCGACCCTTTCGATCAGTAA 2379 46.57 MAKKKNLFVFMDVSIDGDPIDRMVFELFYDVAPKTAENFRALCTGEKGVGPKTGRVLHYKGSFLHRIVKGSMVQGGDFIKRDGTVGESIYGGKFPDEAPRLKHDETGLLSMAIADRDTLGSHFLITLKANHHLDRKCVVFGKLVQGLEVLKKIENFGDEDGTPAVTVKIINCGEFNKDKKKVKPRMKKDSSDEDDGYEAKRKDKHKKSSRDKRRKRRRYYTSESDSSSDSESDSDSDSDSDSDLSVSDESSSSDDRPKKRRGSSRRDRYRRGKRRDKRREKKRRRHDRRSKRKSRRASDSLTNTEDESKSKSTSSDDGLNVQGKDHKCKDSSKKNAENLTSSPEKREETDRMEIDGGRFQKENGEQRRNGTVNSDNKSDRSADRQPDVVDDHPGKYRNRSTSPKIAMSKSMSTTSRKSLSNSPSVGPKQSVSKARSVSGSPPPSPQRSRSMDRSPVRGGSNRSPSRSISRSPVAGRKGRTISRSPLRARSQRRVSRSPSPLRSPLRRNTRSPSRSPPRRVARSLSRSPLRRNTRSPSRSPLRKNVKSISRSPVRSSRRSLSRSSGRAPSRRSISRSPVRAPIRISSRNYSRSPSPRRRPRSPPSNRARSESRSVSPDTSPKRIRRGRGFSQRYSYARRYRTPSLSPPRSYRYNGRSERDRYSSYRRYSPRRYRSPPRARSPIRYRSRRSRTHSVSRSPRYRHRHYSRSRSPIRSRSPVEGSRPLVSPRDEKRRSLSRSRSPSRSRSSSRSPPPRPQSLRRTSKDRSSSSSRSPNGKKGLVSYGDGSPDPFDQ 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11397704 11403450 - Conep07aG0176700.1 Cone7ag1714 442310

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1714 792 MobiDBLite consensus disorder prediction 740 757 - -
Cone7ag1714 792 MobiDBLite consensus disorder prediction 228 244 - -
Cone7ag1714 792 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Cone7ag1714 792 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Cone7ag1714 792 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Cone7ag1714 792 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Cone7ag1714 792 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Cone7ag1714 792 Gene3D - 1 176 IPR029000 -
Cone7ag1714 792 MobiDBLite consensus disorder prediction 670 710 - -
Cone7ag1714 792 MobiDBLite consensus disorder prediction 320 365 - -
Cone7ag1714 792 SUPERFAMILY Cyclophilin-like 6 182 IPR029000 -
Cone7ag1714 792 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 173 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Cone7ag1714 792 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 6 175 - -
Cone7ag1714 792 MobiDBLite consensus disorder prediction 372 398 - -
Cone7ag1714 792 MobiDBLite consensus disorder prediction 262 293 - -
Cone7ag1714 792 MobiDBLite consensus disorder prediction 401 470 - -
Cone7ag1714 792 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Cone7ag1714 792 MobiDBLite consensus disorder prediction 178 204 - -
Cone7ag1714 792 MobiDBLite consensus disorder prediction 652 666 - -
Cone7ag1714 792 MobiDBLite consensus disorder prediction 294 313 - -
Cone7ag1714 792 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Cone7ag1714 792 MobiDBLite consensus disorder prediction 178 792 - -
Cone7ag1714 792 MobiDBLite consensus disorder prediction 484 571 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1714 K09566 - - csv:101210345 535.798
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag1714 Cone-Chr7:11397704 Cone8ag1151 Cone-Chr8:10037488 2.92E-52 dispersed
Cone4ag1806 Cone-Chr4:13098215 Cone7ag1714 Cone-Chr7:11397704 1.21E-192 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g446 . . . . Bpe02g01238 . . . Cmo05g00413 Cmo12g00276 . Cma05g00402 . Car12g00307 . Cpe07g00284 . Bhi04g00994 . . . Hepe10g0270 . . . . . . . . . Cone4ag1806 Cone7ag1714 . . . . . Cme03g01642 Blo17g00026 Blo18g00035 Bda01g00993 . . . Bma01g01285 Bma02g00030 . . . . Cma12g00325 . Car05g00336 Cpe11g00342 . . . . . . . . Cla08g01312 Cam08g1772 Cec08g1354 Cco08g1474 Clacu08g1468 . Cre08g1255 Lsi08g01176 . Chy03g01144 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0054073 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1