Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag1730 | ATGAATAAAGAAAATCCGGCTGCCAAAGCTGACAAGCCTACTGTGAGAATCACACGAGCACGGGCTAAAGCCTTAAGCACATTAGGAGGGGGAGTTCGCCCCTCTAAATCTTCTATTGTAGAAGATCAGAAGTGTGAACTCCGAGGAAACTCTAAAAGAGCAGCATCGGATGTGAGTAACCCTGCTGGGATTTCCACTGCTTGCCTTCAGCATAAGAAAAGGGCAGTGCTGAAAGATGTAACAAACATCTTCTGCGAAGATTCTTACAAGAACTGTATCGATCCTTATAAAGTTGAGACTACCAAGCAGGTCCTTAGAGGTCCTGCAAATATGGTGCCAAATATCTCTGTAAAAAATTCACGAGTGCATGATGATGCGAAGGAAAAATTAGCTGAACATTTGTCCAAAATAAAGGTGGTGGAATCACAAGAGCTTAAAGTAGAAGTGAATACTGAAAAAATGGAGAAAGTACTGGAAAGTTTGTGTGAGAGCGTCGGGGGATCTGTTGTAGCAGTATTTATGCATCCTATGCCTGCAAAACCACAATGCCCTAAGAATAGAGATGACGATATGGTTTGCGAGAAATTAGGAATCTCAGATGACTCGGGAATCGTTAACATTGACACAAAGACAGAAAATACCCATGCATGTTGCTTATATGCCCCTGAGATATACAATAGAATTCGTCTCACAGAGCTTGATCATAGGGCATCGACAAATTATATGGAAAAGCTGCAACAAGAAATCACTGCAAGCATGCGGGGAATTCTTGTTGACTGGCTTGTGGAGGTCTCTGAAGAGTATAAGCTGGTGCCTGATACGCTTTACCTCACGGTGAATCTCATCGATCGATTTCTTTCTAAAAATCATATTAGAAAGCAAAGACTTCAGCTTCTTGGTGTTGCATGCATGCTAATTGCCTCAAAATATGAAGAAATCTGTGCCCCACGGGTGGAAGAATTTTGCTTTATTACAGACAATACTTACAAAAAAATAGAGGTATTAGAAATGGAGAGTGGAATCTTAAACTTAGTGCATTGTCAGCTCTCTGTTCCCACAACAAAAACGTTTCTCAGGAGGTACGTTCAAGCAGCACAGGCTACTTATAAGGTTCCTTGCGAAGAACTCGAGTTTTTGGCAAACTACTTAGCAGAGTTGACTCTTGTTGAGTACAGCTTCCTAGAGTTCCTTCCTTCTCTGATAGCTGCTTCTGCTGTGTTCCTTGCCAGATGGACTCTTAACCAATCAAATCACCCATGGAATCCTACTCTACAGCACTATACCAGTTACAAAGCTTCTGAGCTGAAAACTACAGTCCTAGCCCTGGAAGATTTGCAACTCAACACTAACGGCTCCTCCCTCATCGCTATACGCCAGAAGTATCGGCAACAAAAGTTCAAGTGTGTAGCGGATTTTACCTCCTCACGGCCCATCCTATCAATTTTTTCTGAAGATTAG | 1458 | 42.18 | MNKENPAAKADKPTVRITRARAKALSTLGGGVRPSKSSIVEDQKCELRGNSKRAASDVSNPAGISTACLQHKKRAVLKDVTNIFCEDSYKNCIDPYKVETTKQVLRGPANMVPNISVKNSRVHDDAKEKLAEHLSKIKVVESQELKVEVNTEKMEKVLESLCESVGGSVVAVFMHPMPAKPQCPKNRDDDMVCEKLGISDDSGIVNIDTKTENTHACCLYAPEIYNRIRLTELDHRASTNYMEKLQQEITASMRGILVDWLVEVSEEYKLVPDTLYLTVNLIDRFLSKNHIRKQRLQLLGVACMLIASKYEEICAPRVEEFCFITDNTYKKIEVLEMESGILNLVHCQLSVPTTKTFLRRYVQAAQATYKVPCEELEFLANYLAELTLVEYSFLEFLPSLIAASAVFLARWTLNQSNHPWNPTLQHYTSYKASELKTTVLALEDLQLNTNGSSLIAIRQKYRQQKFKCVADFTSSRPILSIFSED | 485 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 11463130 | 11466044 | + | Conep07aG0178300.1 | Cone7ag1730 | 442326 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag1730 | 485 | SMART | cyclin_7 | 259 | 343 | IPR013763 | - | |
Cone7ag1730 | 485 | SMART | cyclin_7 | 356 | 444 | IPR013763 | - | |
Cone7ag1730 | 485 | FunFam | Cyclin A1 | 340 | 471 | - | - | |
Cone7ag1730 | 485 | Coils | Coil | 123 | 143 | - | - | |
Cone7ag1730 | 485 | ProSitePatterns | Cyclins signature. | 254 | 285 | IPR048258 | - | |
Cone7ag1730 | 485 | Gene3D | - | 223 | 470 | - | - | |
Cone7ag1730 | 485 | PIRSF | Cyclin_A_B_D_E | 27 | 482 | IPR046965 | GO:0016538(InterPro)|GO:0044772(InterPro) | |
Cone7ag1730 | 485 | FunFam | Mitotic cyclin 6 | 237 | 337 | - | - | |
Cone7ag1730 | 485 | PANTHER | CYCLINS | 202 | 463 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Cone7ag1730 | 485 | SUPERFAMILY | Cyclin-like | 212 | 349 | IPR036915 | - | |
Cone7ag1730 | 485 | Gene3D | - | 237 | 350 | - | - | |
Cone7ag1730 | 485 | Pfam | Cyclin, N-terminal domain | 223 | 349 | IPR006671 | - | |
Cone7ag1730 | 485 | SUPERFAMILY | Cyclin-like | 351 | 472 | IPR036915 | - | |
Cone7ag1730 | 485 | CDD | CYCLIN_AtCycA-like_rpt2 | 352 | 466 | - | - | |
Cone7ag1730 | 485 | Pfam | Cyclin, C-terminal domain | 352 | 474 | IPR004367 | - | |
Cone7ag1730 | 485 | SMART | Cyclin_C_2 | 352 | 475 | IPR004367 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone4ag1423 | Cone-Chr4:11351242 | Cone7ag1730 | Cone-Chr7:11463130 | 1.03E-95 | dispersed | |
Cone7ag1514 | Cone-Chr7:10540540 | Cone7ag1730 | Cone-Chr7:11463130 | 1.04E-94 | dispersed | |
Cone7ag1730 | Cone-Chr7:11463130 | Cone7ag1934 | Cone-Chr7:12340108 | 5.27E-52 | dispersed | |
Cone17ag0200 | Cone-Chr17:961179 | Cone7ag1730 | Cone-Chr7:11463130 | 3.20E-138 | wgd | |
Cone20ag1212 | Cone-Chr20:8063401 | Cone7ag1730 | Cone-Chr7:11463130 | 1.87E-130 | wgd | |
Cone4ag1826 | Cone-Chr4:13192809 | Cone7ag1730 | Cone-Chr7:11463130 | 3.27E-283 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag1730 | K06627 | - | cit:102630346 | 555.058 |