Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1732 ATGGGTGTTCCTTCACTGGAACTAGGCCGTGAAAGTGAAACTGACACTTATCCATTTTTAATGGAACCTCCGGAAAGTCTTAACAGTACCCAGCATGTTCTTGACATACCAAACAGGGAAGAAGCTTCCTCATCCCACTTGTATCAGGGAAGACTATCTAATGGGTCAAATACATTGCAGCTTGAAGATAGACCTGCAGTCAGTACAAGAACACCTGCATTTCAACCTTCACTTTCTTCTTCTAATGGATCAAACAATAGGAACTCCTCTGTCACGAGGAGAGGAGAAGCCCGTAGGCGTAGAAGTCCATTAAATTCTGGGCTATGGATATCCGTTGAACTATTTCTCACTCTAAGCCAAATTATTGCAGCTATTCTAGTGTTGTCATTGTCTGCAAATGAGCATCCACACGAGCCATTGTTTGTGTGGATTGTGGGTTATATGTCTGGATGTGTTGCCACGCTTCCCCTTCTTTATTGGCGCTATAGATACCGTAATCAGTCTTCAGAGCAGGGGTCAGCTCAATCCCGTCAGAGTCCTCAGATAAATGTTTCAGGCGGTCTTTCTCTGTCTGTTTCTAGAAGTTCAGAGGGCGAAGATCGTCAGACTGCTGGCCCATCACCTAGAGGCAGTCAAGGTTCAAGACCACTAAGTGCAAGATTGAAGGCATTTGTGGAATATTTCAAAATGGCCTTGGATTGTTTCTTTGCTGTTTGGTTTGTGGTTGGAAATGTGTGGATCTTTGGAGGGCACTCATCTGCTTCCGAGTCTCCGAATTTGTACAGGTTATGTATAGCGTTTCTTGCCATTAGCTGCATTGGGTATGCTATGCCTTTCCTTCTATGTGCAACAATTTGCTGCTGTCTACCTTGTATGATTTCCATCCTTGGATTTCGAGAGGATCTGACCCAGACTAGAGGAGCTACTGCAGAATCAATTGAGGCTTTGCCAATCTACAAGTTCAAGCTGAAGAAAAGTAGAACAGGGGATGATATAGAAACCGGCTCTAGTGCTGGGGAAGGCGGACTCATTGCTGGTGGAACTGATAGGGAACGAATGATTTCTGGAGAAGACGCTGTTTGTTGTATCTGCTTGGCAAAATATGGAAACAACGAGGAGTTAAGAGAGTTGCCATGTTCTCATTTATTCCACAAAGATTGTGTAGATAAGTGGTTGAAGCTTAATGCATCTTGTCCTCTTTGTAAGGCCGAGGTTGGCGAGAGCAACGCCGGAGGATCAAACACCACCTAG 1251 44.6 MGVPSLELGRESETDTYPFLMEPPESLNSTQHVLDIPNREEASSSHLYQGRLSNGSNTLQLEDRPAVSTRTPAFQPSLSSSNGSNNRNSSVTRRGEARRRRSPLNSGLWISVELFLTLSQIIAAILVLSLSANEHPHEPLFVWIVGYMSGCVATLPLLYWRYRYRNQSSEQGSAQSRQSPQINVSGGLSLSVSRSSEGEDRQTAGPSPRGSQGSRPLSARLKAFVEYFKMALDCFFAVWFVVGNVWIFGGHSSASESPNLYRLCIAFLAISCIGYAMPFLLCATICCCLPCMISILGFREDLTQTRGATAESIEALPIYKFKLKKSRTGDDIETGSSAGEGGLIAGGTDRERMISGEDAVCCICLAKYGNNEELRELPCSHLFHKDCVDKWLKLNASCPLCKAEVGESNAGGSNTT 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11469243 11472077 + Conep07aG0178500.1 Cone7ag1732 442328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1732 416 MobiDBLite consensus disorder prediction 1 26 - -
Cone7ag1732 416 FunFam E3 ubiquitin-protein ligase 344 411 - -
Cone7ag1732 416 MobiDBLite consensus disorder prediction 170 214 - -
Cone7ag1732 416 SUPERFAMILY RING/U-box 353 407 - -
Cone7ag1732 416 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 21 406 - -
Cone7ag1732 416 MobiDBLite consensus disorder prediction 65 98 - -
Cone7ag1732 416 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 346 414 IPR013083 -
Cone7ag1732 416 ProSiteProfiles Zinc finger RING-type profile. 361 402 IPR001841 -
Cone7ag1732 416 MobiDBLite consensus disorder prediction 65 91 - -
Cone7ag1732 416 Pfam Ring finger domain 361 402 IPR001841 -
Cone7ag1732 416 CDD RING-H2_PA-TM-RING 360 402 - -
Cone7ag1732 416 SMART ringv_2 360 402 IPR011016 GO:0008270(InterPro)
Cone7ag1732 416 MobiDBLite consensus disorder prediction 170 215 - -
Cone7ag1732 416 SMART ring_2 361 401 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0801 Cone-Chr19:6442919 Cone7ag1732 Cone-Chr7:11469243 4.62E-11 dispersed
Cone6ag0756 Cone-Chr6:3844159 Cone7ag1732 Cone-Chr7:11469243 5.10E-40 dispersed
Cone7ag1732 Cone-Chr7:11469243 Cone9ag0760 Cone-Chr9:3637166 2.99E-42 dispersed
Cone16ag0681 Cone-Chr16:8140932 Cone7ag1732 Cone-Chr7:11469243 4.04E-125 wgd
Cone17ag1053 Cone-Chr17:7925638 Cone7ag1732 Cone-Chr7:11469243 1.41E-190 wgd
Cone2ag0338 Cone-Chr2:1787368 Cone7ag1732 Cone-Chr7:11469243 3.32E-121 wgd
Cone4ag1828 Cone-Chr4:13199765 Cone7ag1732 Cone-Chr7:11469243 4.76E-283 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1732 - - - 0.0