Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1734 ATGGGTGTAGATTACTATAACATATTGAACGTGAATAGGAATGCAACCGAAGATGATTTGAAAAAGTCGTATCGAAGGTTGGCGATGAAATGGCATCCTGATAAGAACCCTAACACCAAGAAAGAAGCTGAAGCCAAATTCAAGCAGATCTCCGAGGCTTACGAGGTATTAAGTGATCCTCAGAAGAGAGCAGTATATGATCAGTATGGTGAGGAAGGGTTGAAAGATATGCCACCGCCCGGAAGCGGCGGATTTTCTTTCGGAAGTGGAGGTGGAGGTGGATCCAATGGGTTCAATCCAAGAAATGCAGAGGACATTTTTGCAGAGTTTTTCGGGAGTAGCCCTTTCGGATTTGGATCATCAGGTCATGCAAGGTCTACGAGGTTCCATTCAGAAGGGGGAGGAACTTTTGGAGGATTTAGTGGTGGGTCCGAAAGTACATTCAAATCATATAATAGCGAAAGGACCACTCCCAAGAAAAAACCACCGCCCGTTGAAAGCAAATTACCTTGCAGCCTTGAAGAGCTCTACTCTGGATCCACAAGGAAAATGAAGATCTCAAGGACTACAGTAGATACCAATGGCCGGCAAGTACCAGAAACCGAGATTCTAACAATTGATGTGAAGCCTGGATGGAAGAGGGGAACGAAGATTACTTTTCCAGACAAAGGGAATGAGCAGCCAAACCAACTCCCAGCTGACTTGGTGTTTGTTATTGACGAGAGGCCACATGGCGTTTACAAGAGAGATGGAAACGACATCATCGTGAACCACAGGGTGTCATTAGCTGAGGCTTTGGGTGGCACAACCGTAAAACTTACTACACTTGATGGGCGGGAATTGTCGATCCCAGTTACTGATATTGTGAACCCAGGTTATGAGCTTGTTGTTGCAAGAGAGGGGATGCCTACTGTAAGAGAACCAGGTCGTAGAGGTGATTTGAGGATTATATTTGAGGTAAAGTTTCCTGCTAGGTTGACTTCCGAGCAACGAGCGGGCTTAAAGCGGGCCTTGGGTAGTTGA 1023 45.94 MGVDYYNILNVNRNATEDDLKKSYRRLAMKWHPDKNPNTKKEAEAKFKQISEAYEVLSDPQKRAVYDQYGEEGLKDMPPPGSGGFSFGSGGGGGSNGFNPRNAEDIFAEFFGSSPFGFGSSGHARSTRFHSEGGGTFGGFSGGSESTFKSYNSERTTPKKKPPPVESKLPCSLEELYSGSTRKMKISRTTVDTNGRQVPETEILTIDVKPGWKRGTKITFPDKGNEQPNQLPADLVFVIDERPHGVYKRDGNDIIVNHRVSLAEALGGTTVKLTTLDGRELSIPVTDIVNPGYELVVAREGMPTVREPGRRGDLRIIFEVKFPARLTSEQRAGLKRALGS 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11478059 11479924 - Conep07aG0178700.1 Cone7ag1734 442330

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1734 340 MobiDBLite consensus disorder prediction 134 169 - -
Cone7ag1734 340 Gene3D DnaJ domain 3 122 IPR036869 -
Cone7ag1734 340 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Cone7ag1734 340 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 339 IPR051339 GO:0005829(PANTHER)|GO:0051082(PANTHER)|GO:0051085(PANTHER)|GO:0051087(PANTHER)
Cone7ag1734 340 SUPERFAMILY HSP40/DnaJ peptide-binding domain 247 332 IPR008971 GO:0006457(InterPro)|GO:0051082(InterPro)
Cone7ag1734 340 Gene3D - 164 242 - -
Cone7ag1734 340 Pfam DnaJ C terminal domain 165 323 IPR002939 -
Cone7ag1734 340 CDD DnaJ 4 59 IPR001623 -
Cone7ag1734 340 FunFam DNAJ heat shock family protein 243 338 - -
Cone7ag1734 340 PRINTS DnaJ domain signature 24 39 IPR001623 -
Cone7ag1734 340 PRINTS DnaJ domain signature 42 62 IPR001623 -
Cone7ag1734 340 PRINTS DnaJ domain signature 6 24 IPR001623 -
Cone7ag1734 340 PRINTS DnaJ domain signature 62 81 IPR001623 -
Cone7ag1734 340 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Cone7ag1734 340 Gene3D - 243 339 - -
Cone7ag1734 340 MobiDBLite consensus disorder prediction 73 99 - -
Cone7ag1734 340 CDD DnaJ_C 163 326 - -
Cone7ag1734 340 SUPERFAMILY Chaperone J-domain 3 73 IPR036869 -
Cone7ag1734 340 FunFam DNAJ heat shock family protein 3 123 - -
Cone7ag1734 340 FunFam Dnaj homolog subfamily b member 160 242 - -
Cone7ag1734 340 SUPERFAMILY HSP40/DnaJ peptide-binding domain 164 244 IPR008971 GO:0006457(InterPro)|GO:0051082(InterPro)
Cone7ag1734 340 SMART dnaj_3 3 62 IPR001623 -
Cone7ag1734 340 Pfam DnaJ domain 4 67 IPR001623 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1734 K09510 - - csv:101204033 523.857
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag0603 Cone-Chr18:3043107 Cone7ag1734 Cone-Chr7:11478059 9.63E-47 dispersed
Cone1ag0180 Cone-Chr1:1025773 Cone7ag1734 Cone-Chr7:11478059 3.04E-143 dispersed
Cone20ag0994 Cone-Chr20:7016780 Cone7ag1734 Cone-Chr7:11478059 1.42E-36 dispersed
Cone2ag0864 Cone-Chr2:34610349 Cone7ag1734 Cone-Chr7:11478059 5.70E-124 dispersed
Cone5ag0626 Cone-Chr5:2683752 Cone7ag1734 Cone-Chr7:11478059 1.39E-15 dispersed
Cone5ag1689 Cone-Chr5:12019246 Cone7ag1734 Cone-Chr7:11478059 9.42E-123 dispersed
Cone7ag0639 Cone-Chr7:3290522 Cone7ag1734 Cone-Chr7:11478059 1.07E-11 dispersed
Cone7ag1734 Cone-Chr7:11478059 Cone9ag1474 Cone-Chr9:10890100 1.28E-31 dispersed
Cone19ag0565 Cone-Chr19:4776198 Cone7ag1734 Cone-Chr7:11478059 3.63E-15 transposed
Cone4ag1830 Cone-Chr4:13209040 Cone7ag1734 Cone-Chr7:11478059 5.99E-205 wgd
Cone6ag1557 Cone-Chr6:12189503 Cone7ag1734 Cone-Chr7:11478059 8.45E-31 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g373 Blo01g01363 . Bda01g00723 . . . . Bma01g02150 . . . . . . . . . . . . . . . . . . . . . . . . Cone7ag1734 . . . . Chy04g00340 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007809 1 1 1 1 1 1 2 1 1 1 1 1 2 0 1 2 1 2 2 1 1 1 1 1 1 1 1 2 2 1 36