Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1738 ATGGTGGGGGGTGGTAGCAGGAGAGATGAGGGGTCCATGGTCATCAACAACACCAACGTTTTTGCAGCACTCGAGACTCTAAGGAAGAAGAAGAAGTCTGACAAGGAGCGCAAGAGCAAGGGGTCATCTAAGTCACAGGCTTCCGGAACCAAGGACCCTGAGCCCCAGGTTTTCTGGGCCCCAGCTCCATTGAATTCGAAGTCTTGGGCAGATGTTGATGATGAAGATGATGATGATTACTATGCCACCACAGCTCCGCCCCAGGCAGTGTGGGCCACGTCGGACCTGCAAGAGACCAAGGGGATGCCGAGCAATGTCGAGGAAAGTGAGAGTGAAGATGATATTCTTGACGAAGGCGATGATGATGTAGAGGAAGATCATGGACCTGATCATGAGCCAGAGGTTCCTGTGCAGTCTGAGTCGGTTGTGGAGAAGCATCCTGAATCTTCTGTGGCACCTAAGGAGGCTGAAAGGCAGCTTTCCAAAAAGGAAAGGAAAAAGAAGGAACTTGAGGAACTTGAGGCTCTTTTGGCTGATTTTGGGGTAGCCAAAAAGGAGAGCAATGATCAGGATGACTCTTCACGAGAGGCCGCTCAAGAGAAGAGAGCAGAGGAAGTGAATGGAGATGGTGAGAAGAAGGGAAGTGCACCTGGAGAGTCCAAAAGCACCAAGAAGAAGAAAAAGAAGGAAAAGGCTTCCAAGGAGGTGAAGGAACAGGATCAGCCAAACAACTCGGATGGAGCCAATGGCCCAGATGAAACAGCTGGCAATGAACCTACAGACGAAGATGCCTCAACCATTGATGTTAAGGAGCGGCTTAAGAAAATGGCATCTGTTAAGAAGAAGAAATCTAGTAAAGAGAAAGATGCTGCTGCAAAAGCTGCTGCTCAAGAGGCTGCTGCAAGGTCTGCAAGACTTGCTGCAGCAAAAAAGAAAGAGAAGAACCATTACAACCAACAGCCAATCCGGTGA 972 49.28 MVGGGSRRDEGSMVINNTNVFAALETLRKKKKSDKERKSKGSSKSQASGTKDPEPQVFWAPAPLNSKSWADVDDEDDDDYYATTAPPQAVWATSDLQETKGMPSNVEESESEDDILDEGDDDVEEDHGPDHEPEVPVQSESVVEKHPESSVAPKEAERQLSKKERKKKELEELEALLADFGVAKKESNDQDDSSREAAQEKRAEEVNGDGEKKGSAPGESKSTKKKKKKEKASKEVKEQDQPNNSDGANGPDETAGNEPTDEDASTIDVKERLKKMASVKKKKSSKEKDAAAKAAAQEAAARSARLAAAKKKEKNHYNQQPIR 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11504432 11507604 - Conep07aG0179100.1 Cone7ag1738 442334

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1738 323 MobiDBLite consensus disorder prediction 179 223 - -
Cone7ag1738 323 MobiDBLite consensus disorder prediction 108 128 - -
Cone7ag1738 323 Coils Coil 153 183 - -
Cone7ag1738 323 MobiDBLite consensus disorder prediction 26 166 - -
Cone7ag1738 323 PANTHER EXPRESSED PROTEIN 1 323 - -
Cone7ag1738 323 MobiDBLite consensus disorder prediction 26 42 - -
Cone7ag1738 323 MobiDBLite consensus disorder prediction 179 323 - -
Cone7ag1738 323 MobiDBLite consensus disorder prediction 87 104 - -
Cone7ag1738 323 MobiDBLite consensus disorder prediction 305 323 - -
Cone7ag1738 323 MobiDBLite consensus disorder prediction 129 166 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1738 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1056 Cone-Chr17:7942281 Cone7ag1738 Cone-Chr7:11504432 6.95E-96 wgd
Cone20ag0646 Cone-Chr20:3927036 Cone7ag1738 Cone-Chr7:11504432 1.47E-81 wgd
Cone4ag1833 Cone-Chr4:13226848 Cone7ag1738 Cone-Chr7:11504432 8.18E-159 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g376 Blo01g01362 . Bda01g00722 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone7ag1738 . . . . Chy04g00337 . . . . . . Bpe04g00040 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cme04g00377
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004345 2 1 1 0 2 1 2 1 1 1 1 1 2 1 1 2 1 4 2 1 1 1 1 1 1 1 1 4 2 2 43