Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1740 ATGGTCTCGGACCCGTTTGAATTCACTGCCAACTGGTTGGGACTCAATGTTTGCAATTATACAGGTGTGTTCTGCAATAAGGCTCTAGACGACAGATCAATCCGAATTGTTGCAGGCATTGATCTAAACCATGGAGACATTGCTGGTCAGCTCCCTGAAGAGCTAGGACTCTTATCAGATATCGCATTGTTTCACATCAACTCTAACCGGTTTTGTGGGAAAATTCCAAGCAGTTTCCGAAAATTGAAGATTCTCTTCGAGCTTGACGTCAGTAACAATCGGTTCGCAGGACAGCTTCCTGACGTTGTTCTTGATTTGCCTTGTCTTATATATCTCGGTCTTAGGTTCCATGAGTTTGAAGGTGAAGTCCCTAAGGCTCTTTTCGATAAAAGATCTGATGCCATTTTTATCAACAATAACAGGTTTGAATTAGAGCTTCAGGATAATTTCAGGAACTCGCCGGTTTCTGTCATTGTTCTTGCCAGTAATAAATTCCATGGATGTGTACCTGCAAGTTTAGGAAACATGTCAAAGACATTGAATGAGTTAATCCTTATAAACAATGGGTTGGCTTCTTGCTTGCCAAAGGAAAGAGGAATGTTGTGGAATTTGAAAGTGCTTGATTTGAGCTTCAATGATCTCGTGGGCGAATTGCCAGACACCATTGCCAAAATGGCGAGCTTGGAAATGCTAAATGTCGCGCATAATATGCTTTCCGGAAGTATTCCCAGAAGCATTTGTGCACTTCCTAAGCTGCAGGGGTTTCATTTAGAACACAACTTTTTCGAAGCCAGGCATATGGTTTGTTTGGAACTGGAGGAGTTTAATGACAAGAGGAACTGTATAGACATCCAAATTGCAATGTGA 867 41.75 MVSDPFEFTANWLGLNVCNYTGVFCNKALDDRSIRIVAGIDLNHGDIAGQLPEELGLLSDIALFHINSNRFCGKIPSSFRKLKILFELDVSNNRFAGQLPDVVLDLPCLIYLGLRFHEFEGEVPKALFDKRSDAIFINNNRFELELQDNFRNSPVSVIVLASNKFHGCVPASLGNMSKTLNELILINNGLASCLPKERGMLWNLKVLDLSFNDLVGELPDTIAKMASLEMLNVAHNMLSGSIPRSICALPKLQGFHLEHNFFEARHMVCLELEEFNDKRNCIDIQIAM 288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11517867 11518733 - Conep07aG0179300.1 Cone7ag1740 442336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1740 288 Gene3D Ribonuclease Inhibitor 1 155 IPR032675 -
Cone7ag1740 288 FunFam Leucine-rich repeat extensin-like protein 1 1 152 - -
Cone7ag1740 288 Pfam Leucine rich repeat 203 260 IPR001611 GO:0005515(InterPro)
Cone7ag1740 288 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 1 283 IPR051582 -
Cone7ag1740 288 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 175 265 - -
Cone7ag1740 288 SUPERFAMILY L domain-like 10 264 - -
Cone7ag1740 288 Gene3D Ribonuclease Inhibitor 156 287 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag0673 Cone-Chr7:3656919 Cone7ag1740 Cone-Chr7:11517867 4.01E-34 dispersed
Cone7ag1740 Cone-Chr7:11517867 Cone8ag1516 Cone-Chr8:11443100 1.84E-27 dispersed
Cone16ag0754 Cone-Chr16:8541821 Cone7ag1740 Cone-Chr7:11517867 2.49E-29 wgd
Cone2ag0284 Cone-Chr2:1476204 Cone7ag1740 Cone-Chr7:11517867 1.55E-28 wgd
Cone4ag1835 Cone-Chr4:13239822 Cone7ag1740 Cone-Chr7:11517867 1.94E-84 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1740 - - - 0.0