Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1741 ATGCTGAAAAAGAGGAGCAGGTCAGTGCAGAAAGATCGACAACCAAACCATATCAGTGGTCTAACAATGGTGGATTCTGGTTCTGAGTCTGATGTCTCCGGATCTAAACCCAAAACCAGCTCCCTTTTCAGTGTCTCTGGTCTGTTTGTTGGATTGAGCCCTAAGGGTTTATCAGAAACTGATTCGGTTAATAGTCCGACTTCGCCTCTGGATGCTCGGGTATTTTCAAATCTAAGCAGTGGTCTTAAGTCCTCTAGGCCATCCCAAGATGGAATAAGAAAGAGATGGGATTGCACCAAAGTTGGCCTAGGAATCATAGATTCTCTTGATGATGATGTGATGAAGATTTCTGGAAAACCCTTTTGTTCTTCAGAGAATAAGAACATTCTTTTTGGACCTCAAATTAGAAATACTAAGACACCAGATTGTCAAATTCGAACCGATTCTCTGCTTGCACCACCCAAGTCCTTGCCCAAAAATTACACAATTCTCCCACAAAACCAGACAATCAGATCGTCTCTGCTCCAACAGGCCAACTCTGATGTCCTCTTTGAAATTGAAGATTCTCTTTCAGAACCTGAACCTTTTGGGAGAGTCAGGGCTTGTTCATTGGATTCCTGTAGATCATATTCAGGTCGATCTGGTCATGGTCGAAATGATCTCAGCCTTGACATTAACTCTGGTTATAATAACTCTTTGGAAAAGAAACCCACCCATTTAACAAACCCAATTGCAGATAATTATGTGTCCATAGCTTCTGGTAGTGGCTTTATCGGGTCTCTCCGGGCAAGTGAGATTGAGCTTTCTGAAGATTATACATGTGTAATTTCACATGGTTCCAACCCGAAAACAACTTATATTTATGGTGACTGCATTTTAGAAAGTCACTCTAATGATTTAAGCAATTTTGTTAAGAATGAGGAGAAGAAGGTGATAGGAGTATCAGCCGAACCAGTTAACATATCAGATATTTCGACTTCATACCCCTCAAGTGATTTTTTGAGTTTCTGTGATGCTTGCAACAAGAAATTGGAAGAGGGGAAGGATATCTACATATACAGAGGTGAGAAAGCATTTTGCAGCTTGGATTGCAGATCGCAACATATTTTGATCGATGAGGAATTGGAGAAGTCCATCAATAAAAGTTCCGAGGATTCAAAGTCAGACATTGGTCATGATCATGATGATGCACTATTTGAAACTGGCATCATCATTGATCCATAG 1224 40.6 MLKKRSRSVQKDRQPNHISGLTMVDSGSESDVSGSKPKTSSLFSVSGLFVGLSPKGLSETDSVNSPTSPLDARVFSNLSSGLKSSRPSQDGIRKRWDCTKVGLGIIDSLDDDVMKISGKPFCSSENKNILFGPQIRNTKTPDCQIRTDSLLAPPKSLPKNYTILPQNQTIRSSLLQQANSDVLFEIEDSLSEPEPFGRVRACSLDSCRSYSGRSGHGRNDLSLDINSGYNNSLEKKPTHLTNPIADNYVSIASGSGFIGSLRASEIELSEDYTCVISHGSNPKTTYIYGDCILESHSNDLSNFVKNEEKKVIGVSAEPVNISDISTSYPSSDFLSFCDACNKKLEEGKDIYIYRGEKAFCSLDCRSQHILIDEELEKSINKSSEDSKSDIGHDHDDALFETGIIIDP 407
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11519548 11523938 - Conep07aG0179400.1 Cone7ag1741 442337

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1741 407 MobiDBLite consensus disorder prediction 1 41 - -
Cone7ag1741 407 ProSiteProfiles Zinc finger FLZ-type profile. 332 376 IPR007650 -
Cone7ag1741 407 PANTHER FCS-LIKE ZINC FINGER 11 1 405 IPR044585 -
Cone7ag1741 407 MobiDBLite consensus disorder prediction 13 41 - -
Cone7ag1741 407 Pfam zinc-finger of the FCS-type, C2-C2 325 374 IPR007650 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1741 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0925 Cone-Chr11:7574370 Cone7ag1741 Cone-Chr7:11519548 8.86E-22 dispersed
Cone16ag0332 Cone-Chr16:4218992 Cone7ag1741 Cone-Chr7:11519548 4.11E-15 dispersed
Cone4ag0833 Cone-Chr4:5402389 Cone7ag1741 Cone-Chr7:11519548 8.86E-15 dispersed
Cone4ag1837 Cone-Chr4:13243750 Cone7ag1741 Cone-Chr7:11519548 8.29E-247 dispersed
Cone7ag1741 Cone-Chr7:11519548 Cone9ag1497 Cone-Chr9:10993963 2.07E-08 dispersed
Cone6ag1578 Cone-Chr6:12302968 Cone7ag1741 Cone-Chr7:11519548 3.03E-08 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g390 . . Bda01g00719 . . . . Bma01g02147 . . . . . . . . . . . . . . . . . . . . . . . . Cone7ag1741 . . . . Chy04g00329 Cme03g01673 . . . . . . . . . . . . . . . . . . . . . . . . Cla08g01282 Cam08g1740 Cec08g1322 Cco08g1443 Clacu08g1437 . Cre08g1224 Lsi08g01145 . . Cme04g00370
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007053 2 1 0 2 2 1 2 1 1 1 1 1 1 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 1 37