Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1756 ATGGAGTTGGTGAATCCAAATTGTGTGAACGTTGTTTCTTTTTCTACTAAAAGTCCTCACTCCAGGAATCTGACTCCTATTCTCAACCATAGAAATTCACGAGTGCATAGAAGGAGCAAGAAGTTCTCTCCGATTTCAATTTCAATTTCGAATTTCGCAGCTCAAGTTTCGAGCAACGCTGCTGCAACGACGGGACGGAGCTTATCCTCATCTACAAGCAGGACCGAGAACGAGGCATTGAAATCGAGCAAGTCGAGCACTAGCAGTGCTTTGGAGCAGCTTGACATTGAGCGCGGCGTCTGCGTTCCATTTCGCAAGTATTCTCCCGAGACAGTGAGGGGTAAGGTGTTAGAATCCAGAGGGGCTATTGTGTCTCTTATGTTGCGAGGTGTAGAGATAGTATGGAATTTGGGGTTCTACTGGTCTTCTTTGGTGTATGATTTCTTAATTGGAAGAGATGAAGAGATTGTTCCTTATCGTGCTCGGCAGCTTAGGAATCTCTTATGTGATCTGGGACCTTCTTTTATTAAAGCTGGACAGGTTCTGGCAAACAGACCAGATATTATCAGAGAAGATTATATGAATGAGCTTTGCATTCTTCAAGATGATGTTCCACCTTTCCCTAATCAGGTTGCTTTCAACATCATTGAAGATGAACTGGGCCAACCTCTTGAGGCTGTCTTCAGCAAAATTTCTGCACGGACAATTGCAGCAGCTAGTTTAGGTCAAGTATATCGAGCTACTTTGCGTGAATCTGGCGAGGATGTTGCGATTAAGGTGCAAAGACCTCAGATAGAGCCTATAATATATCGGGATCTTTTTCTGTTCCGTGTTCTTGCTTCTTTCTTAAATGGCATCAGTTTACAAAAACTGGGGTGCAATGCTGAGTTGATAGTTGATGAATTTGGTGAAAAGCTTTTGGAGGAGCTGGATTACACCTTGGAGGCCCGTAATATTGAAGATTTTCTTGCGAACTTCGAAGATGATCCTACTGTGAAAATTCCTCGGGTTTATAAACATCTTTCTGGGTCACGAGTTCTAGTAATGGAATGGATTGATGGTATTCGATGCACTGACCCACAGGGTATTAGAAATGCTGGCATTGATGTAGATGGATTTTTGACCGTTGGTGTGAGTGCAGCACTGCGGCAATTACTAGAGTTTGGATTATTCCATGGAGATCCTCATCCAGGCAACATTTTTGCAATGCGTGATGGTCGTATCGCTTATGTAGATTTTGGGAATGTTGCTGAGCTGAGTCAGCAAAATAAACAGATTTTAATTGATGCTGTTGTCCATGCTGTAAATGAGGACTATGCGGAGATGGCAAATGATTTTACGAGGCTCGGCTTCTTGGCTCCAGGGACTGATGTTTCTCCTATCATTCCTGCTTTAGAAGCAATTTGGCAGAACTCCTCTGGAAAAGGCCTCTCTGATTTTAACTTCCGAAGTGTCACCGGGAAGTTTAATCAGCTAGTCTACAATTACCCCATACGAATACCAGAGAGGTTTTCCCTTGTTATTCGTTCTTTGTTGACTCAAGAGGGCATTTGTCTAACTCTGAAGCCTGACTTTAAATTTCTTGAGGTTGCATATCCATATATAGCAAAGCGCCTCTTGACAGACCCAAATCCTGCACTACGTGAACGTCTCATACAGGTTCTTTTCAAAGATGGCATTTTCCAGTGGAAACGGCTTGAAAACCTTATTGTTCTCGCAAAGGAAAATGTGTCCAGGATGAGCAGCAATCCAGCTCTGCAAAAGAATGAGACTAAAAGCTCGAGAGATTTGCAATTTGAGAAGAAACTAGACCTCACAGATACCATCAAAGATGGAGCTCGCCTTTTCCTCATCGATGAACGAATCCGTAGACAACTTCTTCTTGCCTTGACTGAAGACTCAAAGCTTCATATTCAAGAGCTTGTAGACGTATATAGACTTCTTGAAGATCAGATAGATGTACCATCTGTGGCCGTAGAGGTAGCTCAAGTCATGCCTCGGAAGGTGAACTATGGTGTTGATTACTGTGAAGATTCCGATGACTACTACGGACATTATGATTATGATGAAGATTATGATTTTGATGATGAAGATAATGGTGCGCCTAAGTCGACGGAAGATAGTAAGACGCAGGGAATTTGGCGATGCTCCATTTGCACTTACGACAATGATGAAAGTTTATGCGTATGTGATATATGTGGGGTTCTTCGCAACCCTTTGATCACAAAAGTGGGTACAGTTGAGGGCATTGGCAAAGAGTCTAGCGTATCCATCATGGCCAAATCTCTCTTTGCATCATCGCTACGCTGGATGCCCAAAAATGCTGTATTGGTTAAACAGTTGAATGATGAATCAGTAATGAAAAAGGACAATATCCTACTCAAGTATGGGAATACGCGGGGAAATTTTCATGATTTCCATAAGGCTTTTAGCTCTTGTGGCCATTACCACATTAAAATAGATCCTTTCAAGTTCGATGCTCCTTCTCCAGATGATTTGGTTTCCAATGGATTGCTTGCCTCCAAAAAGGGTTCAAAAGCGATCCTCACAGACATAAAACCCCCAAATATATCATTGGGAGGTACTAAAAAGAATGGTGCAATTAATGACCCATCAACTGTGGAATGGTCAGAGAGGTCTTCTGCCTTGATGCCAAAAGGTAGACAAGATAACTCAAAGAATGAAAGTTTCTTTAAGAAAGAGGCTTGTGGCAAACAGTTGAGTTCAAAAAGTTCAGATAGCTCATCTGCCTCAATGCTAAAAGGAAAACAAGTAAATGTGGATCAAATTGATTTCTCGAAGAATGTTACATCCAATATTAAATCAAGAGATAAAGGGGCAGATGACTTGCCTGCATTGATGCCAAAACACAGAGATGAGGTTGTGGATGAGAGCAATACGTCTTCAGGCCAGTGGGACAAACCACAAAATCTTACCAGTAGTTTGAACAGCATGGCTTTGGATGTTAAATCTGCATATTCAAATTATGTTATTTCTAAAGGAGAAAATTCAGAAACTCAGTATAAACCTGAGAAATGGATGCTACTGGATCAAGCTGGAGATTGTTTAACGCAACTGAATCTTGCAATAGTCGGTCATGTTGATTCAGGAAAATCAACTCTTTCAGGCAGACTTCTTCACCTCTTGGGCCGAATATCGAAAAAAGAAATGCACAAAAATGAAAATGAAGCAAAGTTACAGGGAAAAGGGTCCTTTGCTTATGCATGGGCATTGGACGAGAGTGCTGAAGAAAGAGAAAGAGGAATAACCATGACAGTGGGTGTTGCGTATTTTAATTCTAAAAGATATCATGTCGTCATACTTGACTCTCCAGGCCATAAAGATTTTATTCCAAACATGATATCTGGAGCAACACAGGCTGATGCTGCAGTTCTTGTAATTGATGCCTCTGTTGGTTCATTTGAAGCTGGAATGGACAGCTCAAAGGGGCAAACAAGGGAGCATGCACAGCTAATAAGGAGTTTTGGTGTTGACCAGATTATTGTTGCTGTTAACAAAATGGATGTGGTAGATTTCTCCAAGGATCGGTATGACTTCATTAAGCTACAACTTGGAACCTTTCTTCGTACTTGTGGATTCAAAGATTCATCAGTGTCTTGGATTCCACTGAGTGCAATCGGGAATCAAAATCTGACAATGGCCCCTTCTGATGATCGTTTGTTGTCCTGGTATCATGGACCTAACCTATTAGAGGGAATTGATTCTCTCCGACCTCCCACTAGGGACTTCTCAAAGCCTTTGCTTATGCCAATATGTGATGTTATTAAATCACTTTCTATGGGACAAGTATCTGCCTCTGGTAAACTTGAAGCTGGAGCTCTTCGGATTGGATCTAAGGTTCTAGTTATGCCATCTGGCTCTACAGGAACCGTACGTTCTTTAGAACGTGATTCTCAGGCCTGCTCCATTGCAAGAACTGGAGATAATGTGGCTGTTAGCTTACAAGGCATTGATGGTGGAAATGTAATGGCCGGGGGTGTTCTTTGTCATCCCAATTTTCCAGTTGCAGTTTCAAAACATGTGGAGTTGAAGATTCTTGTCTTGGATTTGGCAACCCCAATTTTAATTGGTTCCCAGTTAGAAGTTCATATACACCATGTAAAGGAGGCTGCTAGAGTAGTAAGGATATTGTCATTACTGGATCCAAAGACCAGCAAAGTGACAAAGAAGGCACCAAGGTGTCTCACTGCAAAGCAAAATGCAGTGATTGAGGTCCGTTTGCTCAGCCCTGTCTGTGTGGAGACGTTCTCAACAAGTAGAGCTCTAGGACGGGTGTTTCTAAGAGCATTAGGAAGAACAGTAGCTGTTGGAATCGTAACCCGCGTAATTGAGGAGCAGGAATAG 4365 42.06 MELVNPNCVNVVSFSTKSPHSRNLTPILNHRNSRVHRRSKKFSPISISISNFAAQVSSNAAATTGRSLSSSTSRTENEALKSSKSSTSSALEQLDIERGVCVPFRKYSPETVRGKVLESRGAIVSLMLRGVEIVWNLGFYWSSLVYDFLIGRDEEIVPYRARQLRNLLCDLGPSFIKAGQVLANRPDIIREDYMNELCILQDDVPPFPNQVAFNIIEDELGQPLEAVFSKISARTIAAASLGQVYRATLRESGEDVAIKVQRPQIEPIIYRDLFLFRVLASFLNGISLQKLGCNAELIVDEFGEKLLEELDYTLEARNIEDFLANFEDDPTVKIPRVYKHLSGSRVLVMEWIDGIRCTDPQGIRNAGIDVDGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAPGTDVSPIIPALEAIWQNSSGKGLSDFNFRSVTGKFNQLVYNYPIRIPERFSLVIRSLLTQEGICLTLKPDFKFLEVAYPYIAKRLLTDPNPALRERLIQVLFKDGIFQWKRLENLIVLAKENVSRMSSNPALQKNETKSSRDLQFEKKLDLTDTIKDGARLFLIDERIRRQLLLALTEDSKLHIQELVDVYRLLEDQIDVPSVAVEVAQVMPRKVNYGVDYCEDSDDYYGHYDYDEDYDFDDEDNGAPKSTEDSKTQGIWRCSICTYDNDESLCVCDICGVLRNPLITKVGTVEGIGKESSVSIMAKSLFASSLRWMPKNAVLVKQLNDESVMKKDNILLKYGNTRGNFHDFHKAFSSCGHYHIKIDPFKFDAPSPDDLVSNGLLASKKGSKAILTDIKPPNISLGGTKKNGAINDPSTVEWSERSSALMPKGRQDNSKNESFFKKEACGKQLSSKSSDSSSASMLKGKQVNVDQIDFSKNVTSNIKSRDKGADDLPALMPKHRDEVVDESNTSSGQWDKPQNLTSSLNSMALDVKSAYSNYVISKGENSETQYKPEKWMLLDQAGDCLTQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKEMHKNENEAKLQGKGSFAYAWALDESAEERERGITMTVGVAYFNSKRYHVVILDSPGHKDFIPNMISGATQADAAVLVIDASVGSFEAGMDSSKGQTREHAQLIRSFGVDQIIVAVNKMDVVDFSKDRYDFIKLQLGTFLRTCGFKDSSVSWIPLSAIGNQNLTMAPSDDRLLSWYHGPNLLEGIDSLRPPTRDFSKPLLMPICDVIKSLSMGQVSASGKLEAGALRIGSKVLVMPSGSTGTVRSLERDSQACSIARTGDNVAVSLQGIDGGNVMAGGVLCHPNFPVAVSKHVELKILVLDLATPILIGSQLEVHIHHVKEAARVVRILSLLDPKTSKVTKKAPRCLTAKQNAVIEVRLLSPVCVETFSTSRALGRVFLRALGRTVAVGIVTRVIEEQE 1454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11599024 11608604 + Conep07aG0180900.1 Cone7ag1756 442352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1756 1454 SUPERFAMILY Protein kinase-like (PK-like) 201 439 IPR011009 -
Cone7ag1756 1454 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1025 1263 IPR027417 -
Cone7ag1756 1454 FunFam Elongation factor 1 alpha-like protein 1016 1247 - -
Cone7ag1756 1454 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1023 1254 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cone7ag1756 1454 Pfam Elongation factor Tu GTP binding domain 1026 1242 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cone7ag1756 1454 MobiDBLite consensus disorder prediction 862 891 - -
Cone7ag1756 1454 FunFam Translation elongation factor EF-1 1250 1340 - -
Cone7ag1756 1454 PRINTS GTP-binding elongation factor signature 1027 1040 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cone7ag1756 1454 PRINTS GTP-binding elongation factor signature 1106 1116 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cone7ag1756 1454 PRINTS GTP-binding elongation factor signature 1086 1094 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cone7ag1756 1454 PRINTS GTP-binding elongation factor signature 1167 1176 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cone7ag1756 1454 PRINTS GTP-binding elongation factor signature 1122 1133 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cone7ag1756 1454 Gene3D Translation factors 1251 1340 - -
Cone7ag1756 1454 ProSiteProfiles Protein kinase domain profile. 230 561 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1756 1454 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 1348 1450 IPR009001 -
Cone7ag1756 1454 CDD EF1_alpha 1027 1246 - -
Cone7ag1756 1454 MobiDBLite consensus disorder prediction 63 86 - -
Cone7ag1756 1454 SUPERFAMILY Ran binding protein zinc finger-like 710 737 IPR036443 -
Cone7ag1756 1454 ProSitePatterns Zinc finger RanBP2-type signature. 714 733 IPR001876 -
Cone7ag1756 1454 SUPERFAMILY Translation proteins 1245 1340 IPR009000 -
Cone7ag1756 1454 CDD HBS1_C_III 1341 1449 - -
Cone7ag1756 1454 Gene3D - 1020 1247 IPR027417 -
Cone7ag1756 1454 Pfam GTP-eEF1A C-terminal domain-like 1348 1447 IPR054696 -
Cone7ag1756 1454 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 37 643 IPR050154 -
Cone7ag1756 1454 FunFam elongation factor 1-alpha isoform X4 1344 1453 - -
Cone7ag1756 1454 Gene3D Translation factors 1345 1454 - -
Cone7ag1756 1454 Pfam Elongation factor Tu domain 2 1272 1336 IPR004161 GO:0005525(InterPro)
Cone7ag1756 1454 Pfam ABC1 atypical kinase-like domain 200 444 IPR004147 -
Cone7ag1756 1454 CDD ABC1_ADCK3-like 200 446 - -
Cone7ag1756 1454 MobiDBLite consensus disorder prediction 959 978 - -
Cone7ag1756 1454 MobiDBLite consensus disorder prediction 860 899 - -
Cone7ag1756 1454 Gene3D Transferase(Phosphotransferase) domain 1 214 432 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0786 Cone-Chr17:6064245 Cone7ag1756 Cone-Chr7:11599024 1.01E-113 dispersed
Cone20ag0380 Cone-Chr20:1773749 Cone7ag1756 Cone-Chr7:11599024 3.71E-116 dispersed
Cone4ag1726 Cone-Chr4:12772776 Cone7ag1756 Cone-Chr7:11599024 5.36E-88 dispersed
Cone7ag1756 Cone-Chr7:11599024 Cone8ag0195 Cone-Chr8:1014953 7.52E-80 dispersed
Cone4ag1852 Cone-Chr4:13299639 Cone7ag1756 Cone-Chr7:11599024 0 transposed
Cone4ag1851 Cone-Chr4:13294675 Cone7ag1756 Cone-Chr7:11599024 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1756 - - - 0.0