Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1766 ATGGCTGTAGATCTAATGAGGTTTCCGAAGATGGACAATCAGACGGCTATACAAGAAGCCGCATCACAAGGCTTGAAGAGCATGGAACATCTAATTCGCATGCTATCTACCAACCAGCAATCTAATCAGTTAGCTTGCTCAGACCTCGCCGATCGGACTGTTAACGAATTTCAAACAGTCATTTCTCTACTCAAACCGACCGGCCATGCCCGGTTCAGGCGCGGTCCGCCTAACTCGTCTGCCTCCTCCTCATCATCTACTGATTTATCATCAGCTCTTCCCGTTGATCATTCGCAGGCCATTAGCCTTACCCCGGCGACGTTGACTTCTCCGGTGATCGTTTCTCCTTCACCGATCAAGGCGGCGGCAACTGTTCCTCGATCGACTTCAACCGCTGCTCCGACTGGATTCGTCCAGTCACAGTCACAGAGCATGACTCTGGATTTCACAAAACCTAACATTTTGAGCTCAAATCTACAGAGTACGGAGCTTGAATTCACTAAGGAAACCTTTAGCGTCTCCTCTAGTTCGTCGTTCATGTCGTCAGCTATTACCGGAGACGGAAGTGTATCGAACGGAAAGTTAGGACAGTCACTTTTCTTAGCTCCGGCAGTCTCCGGCGGTAAGCCTCCTCTATCGTCGCCACCATACAAGAAGAGATGCCATGAGCATGACCACTCCGATACTTTATCAGGAAGATTTTCCGGCTCTTCCTCGGCCTCCGGAAGGTGCCATTGCTCCAAGAGAAGAAAAAGTCGCGTGAAGAATACGGTTAGAGTTCCGGCGATCAGTTCGAAAGTGGCGGATATTCCACCGGACGAGTACTCTTGGAGAAAGTACGGTCAGAAGCCGATTAAGGGATCGCCATACCCACGAGGATATTACAAGTGTAGTACGATGAGGGGATGCCCGGCGAGGAAACACGTAGAAAGGGCGACAGATGATCCGACGATGCTGATTGTAACTTACGAAGGCGAGCACCAGCACGCACAGCCCGCGATGCAGGAGAACGTAACCGTGTCCGTGGCTGTGGCTGGTGGAGGAGTGGGTTTGGTTTACGCGTCAACTAGAAGACATGGGAATTAA 1086 50.83 MAVDLMRFPKMDNQTAIQEAASQGLKSMEHLIRMLSTNQQSNQLACSDLADRTVNEFQTVISLLKPTGHARFRRGPPNSSASSSSSTDLSSALPVDHSQAISLTPATLTSPVIVSPSPIKAAATVPRSTSTAAPTGFVQSQSQSMTLDFTKPNILSSNLQSTELEFTKETFSVSSSSSFMSSAITGDGSVSNGKLGQSLFLAPAVSGGKPPLSSPPYKKRCHEHDHSDTLSGRFSGSSSASGRCHCSKRRKSRVKNTVRVPAISSKVADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERATDDPTMLIVTYEGEHQHAQPAMQENVTVSVAVAGGGVGLVYASTRRHGN 361
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 11645922 11647867 - Conep07aG0181900.1 Cone7ag1766 442362
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1766 361 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 16 335 IPR044810 GO:0003700(InterPro)
Cone7ag1766 361 Gene3D WRKY domain 243 333 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone7ag1766 361 MobiDBLite consensus disorder prediction 68 91 - -
Cone7ag1766 361 MobiDBLite consensus disorder prediction 216 230 - -
Cone7ag1766 361 SMART WRKY_cls 271 331 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone7ag1766 361 MobiDBLite consensus disorder prediction 210 251 - -
Cone7ag1766 361 ProSiteProfiles WRKY domain profile. 266 332 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone7ag1766 361 MobiDBLite consensus disorder prediction 76 91 - -
Cone7ag1766 361 FunFam WRKY transcription factor 65 255 332 - -
Cone7ag1766 361 Pfam WRKY DNA -binding domain 273 329 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone7ag1766 361 Pfam Plant zinc cluster domain 218 269 IPR018872 -
Cone7ag1766 361 SUPERFAMILY WRKY DNA-binding domain 269 332 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0216 Cone-Chr11:1074395 Cone7ag1766 Cone-Chr7:11645922 2.40E-83 dispersed
Cone4ag1594 Cone-Chr4:12164332 Cone7ag1766 Cone-Chr7:11645922 1.72E-69 dispersed
Cone6ag1414 Cone-Chr6:11365253 Cone7ag1766 Cone-Chr7:11645922 2.34E-62 dispersed
Cone7ag1354 Cone-Chr7:9836188 Cone7ag1766 Cone-Chr7:11645922 5.67E-71 dispersed
Cone7ag1766 Cone-Chr7:11645922 Cone9ag1341 Cone-Chr9:10068119 1.14E-56 dispersed
Cone17ag1083 Cone-Chr17:8073748 Cone7ag1766 Cone-Chr7:11645922 1.29E-129 wgd
Cone20ag0629 Cone-Chr20:3786118 Cone7ag1766 Cone-Chr7:11645922 9.85E-125 wgd
Cone4ag1861 Cone-Chr4:13342698 Cone7ag1766 Cone-Chr7:11645922 2.73E-198 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46591 None None None None Cone TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1766 - - - 0.0