Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag1766 | ATGGCTGTAGATCTAATGAGGTTTCCGAAGATGGACAATCAGACGGCTATACAAGAAGCCGCATCACAAGGCTTGAAGAGCATGGAACATCTAATTCGCATGCTATCTACCAACCAGCAATCTAATCAGTTAGCTTGCTCAGACCTCGCCGATCGGACTGTTAACGAATTTCAAACAGTCATTTCTCTACTCAAACCGACCGGCCATGCCCGGTTCAGGCGCGGTCCGCCTAACTCGTCTGCCTCCTCCTCATCATCTACTGATTTATCATCAGCTCTTCCCGTTGATCATTCGCAGGCCATTAGCCTTACCCCGGCGACGTTGACTTCTCCGGTGATCGTTTCTCCTTCACCGATCAAGGCGGCGGCAACTGTTCCTCGATCGACTTCAACCGCTGCTCCGACTGGATTCGTCCAGTCACAGTCACAGAGCATGACTCTGGATTTCACAAAACCTAACATTTTGAGCTCAAATCTACAGAGTACGGAGCTTGAATTCACTAAGGAAACCTTTAGCGTCTCCTCTAGTTCGTCGTTCATGTCGTCAGCTATTACCGGAGACGGAAGTGTATCGAACGGAAAGTTAGGACAGTCACTTTTCTTAGCTCCGGCAGTCTCCGGCGGTAAGCCTCCTCTATCGTCGCCACCATACAAGAAGAGATGCCATGAGCATGACCACTCCGATACTTTATCAGGAAGATTTTCCGGCTCTTCCTCGGCCTCCGGAAGGTGCCATTGCTCCAAGAGAAGAAAAAGTCGCGTGAAGAATACGGTTAGAGTTCCGGCGATCAGTTCGAAAGTGGCGGATATTCCACCGGACGAGTACTCTTGGAGAAAGTACGGTCAGAAGCCGATTAAGGGATCGCCATACCCACGAGGATATTACAAGTGTAGTACGATGAGGGGATGCCCGGCGAGGAAACACGTAGAAAGGGCGACAGATGATCCGACGATGCTGATTGTAACTTACGAAGGCGAGCACCAGCACGCACAGCCCGCGATGCAGGAGAACGTAACCGTGTCCGTGGCTGTGGCTGGTGGAGGAGTGGGTTTGGTTTACGCGTCAACTAGAAGACATGGGAATTAA | 1086 | 50.83 | MAVDLMRFPKMDNQTAIQEAASQGLKSMEHLIRMLSTNQQSNQLACSDLADRTVNEFQTVISLLKPTGHARFRRGPPNSSASSSSSTDLSSALPVDHSQAISLTPATLTSPVIVSPSPIKAAATVPRSTSTAAPTGFVQSQSQSMTLDFTKPNILSSNLQSTELEFTKETFSVSSSSSFMSSAITGDGSVSNGKLGQSLFLAPAVSGGKPPLSSPPYKKRCHEHDHSDTLSGRFSGSSSASGRCHCSKRRKSRVKNTVRVPAISSKVADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERATDDPTMLIVTYEGEHQHAQPAMQENVTVSVAVAGGGVGLVYASTRRHGN | 361 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 11645922 | 11647867 | - | Conep07aG0181900.1 | Cone7ag1766 | 442362 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag1766 | 361 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 16 | 335 | IPR044810 | GO:0003700(InterPro) | |
Cone7ag1766 | 361 | Gene3D | WRKY domain | 243 | 333 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone7ag1766 | 361 | MobiDBLite | consensus disorder prediction | 68 | 91 | - | - | |
Cone7ag1766 | 361 | MobiDBLite | consensus disorder prediction | 216 | 230 | - | - | |
Cone7ag1766 | 361 | SMART | WRKY_cls | 271 | 331 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone7ag1766 | 361 | MobiDBLite | consensus disorder prediction | 210 | 251 | - | - | |
Cone7ag1766 | 361 | ProSiteProfiles | WRKY domain profile. | 266 | 332 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone7ag1766 | 361 | MobiDBLite | consensus disorder prediction | 76 | 91 | - | - | |
Cone7ag1766 | 361 | FunFam | WRKY transcription factor 65 | 255 | 332 | - | - | |
Cone7ag1766 | 361 | Pfam | WRKY DNA -binding domain | 273 | 329 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone7ag1766 | 361 | Pfam | Plant zinc cluster domain | 218 | 269 | IPR018872 | - | |
Cone7ag1766 | 361 | SUPERFAMILY | WRKY DNA-binding domain | 269 | 332 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone11ag0216 | Cone-Chr11:1074395 | Cone7ag1766 | Cone-Chr7:11645922 | 2.40E-83 | dispersed | |
Cone4ag1594 | Cone-Chr4:12164332 | Cone7ag1766 | Cone-Chr7:11645922 | 1.72E-69 | dispersed | |
Cone6ag1414 | Cone-Chr6:11365253 | Cone7ag1766 | Cone-Chr7:11645922 | 2.34E-62 | dispersed | |
Cone7ag1354 | Cone-Chr7:9836188 | Cone7ag1766 | Cone-Chr7:11645922 | 5.67E-71 | dispersed | |
Cone7ag1766 | Cone-Chr7:11645922 | Cone9ag1341 | Cone-Chr9:10068119 | 1.14E-56 | dispersed | |
Cone17ag1083 | Cone-Chr17:8073748 | Cone7ag1766 | Cone-Chr7:11645922 | 1.29E-129 | wgd | |
Cone20ag0629 | Cone-Chr20:3786118 | Cone7ag1766 | Cone-Chr7:11645922 | 9.85E-125 | wgd | |
Cone4ag1861 | Cone-Chr4:13342698 | Cone7ag1766 | Cone-Chr7:11645922 | 2.73E-198 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46591 | None | None | None | None | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag1766 | - | - | - | 0.0 |