Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1781 ATGGATTCAAAGAAGTCTAACAAGATCACAGAAATCGTTAGGCTTCAACGAATCCTTAAGAAGTGGAGAAAGCTTGCAAACTCTTCAAAAGCAAGCAGGAATGGCAATGGCAGCAGCAGCGGCAAGAGCATCAAGTTTCTGAAAAGAACACTTTCTCTATCAGATCGCTCTGACTCGGTGCGTAATGATTCGGGCTCAGGCGACGTTAATGTGCCAAAAGGGTATCTAGCTGTTAGTGTGGGAGAAGGGCTTAAGAGATTTGTCATCCCAACACAGTATTTGGGTCATCGTGCATTCCAGATTCTGTTGAGGGAAGCAGAAGAGGAATTTGGGTTTCAACAGGAAGGCGTTTTGAGATTTCCATGTGAAGTTCCTGTCTTTGAAAGTGTAGTGAAAATGGTTGAGCAGAAGAAGGATATCTCTTTTATACAGCAGAAATGTAGTTTCAGTGCAGATGATTTGATGGGTTATTGCCCATCAGATCAAACCCAGCTTCCTGCTCATAATTCTCACCATAATCCACACAGTCCAATGTGCAGATAG 543 43.09 MDSKKSNKITEIVRLQRILKKWRKLANSSKASRNGNGSSSGKSIKFLKRTLSLSDRSDSVRNDSGSGDVNVPKGYLAVSVGEGLKRFVIPTQYLGHRAFQILLREAEEEFGFQQEGVLRFPCEVPVFESVVKMVEQKKDISFIQQKCSFSADDLMGYCPSDQTQLPAHNSHHNPHSPMCR 180
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11707117 11707659 - Conep07aG0183400.1 Cone7ag1781 442377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1781 180 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 15 134 IPR003676 GO:0009733(InterPro)
Cone7ag1781 180 Pfam Auxin responsive protein 20 134 IPR003676 GO:0009733(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag1781 Cone-Chr7:11707117 Cone8ag1252 Cone-Chr8:10456701 1.33E-15 dispersed
Cone7ag0002 Cone-Chr7:20878 Cone7ag1781 Cone-Chr7:11707117 5.68E-21 transposed
Cone4ag1868 Cone-Chr4:13387584 Cone7ag1781 Cone-Chr7:11707117 1.68E-112 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1781 K14488 - cit:102619609 204.142