Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1789 ATGGCGGCAACATATCTAGCTTTCCCTTCACTTCTACCGCCAACAGCTAGATCGTCTACTACTAAATCCTTCGGGCACAATAGTTATAATGTCCGTCCGATCTTGGCTTCTTCGCCACATGTGGAAGAATCCACGAAGCTACCTATCAGAAAAATCCCAGGCAACTATGGCCTCCCTTTCATTGGACCCATCAAAGATAGGTTCGATTTCTTCTACAACCAAGGCAGAGACGACTACTTCAAATCACGCATCCAAAAGTACCAGTCAACAGTGTTCAGAGCAAACATGCCTCCAGGCCCCTTCATTTCGCCAAATCCCAACGTCGTCGTTTTGCTCGACGGCAAGAGTTTCCCCGTACTCTTCGACGTCACCAAGGTCGAAAAAAAGGACCTCTTCACCGGAACTTTCATGCCGTCAACAGACTTCACCGGCGGTTACCGTGTCCTCTCTTACCTCGACCCCTCCGAACCGAATCACGGGAAGTTAAAACAACTCATGTTCTTCCACCTCACGGCTCGTCGCGACGAGGTGATCCCTCAATTCCATTCCAGCTATACGGAGCTCTTTGAATCGCTCGAAAACGACGTCTCATCGGAAGGTAAAGCTAATTTCGGAGAAGCCAACGATCGAGCCGCGTTCAACTTCTTGGCTCGGTCTCTCTACGGGGTTGACCCGGTGGCGACCAAACTCGGTCTCGACGGTCCGAGTTTGATCGGCAAATGGGTGATCTTCCAGCTCAGCCCACTTCTAACATTAGGCCTTCCGAAGATTCTAGAAGATCTTCTCATCCACACTTTTCCTCTTCCTTCATTCCTCGTCAAATCCGACTACAATCGCCTCTACGCTTTCTTCTACGAGTCGTCTGAATTTTTACTAGAGGAAGGCCGGAGACTCGGCCTCTCGAAAGAGGAAACGTGTCACAACCTACTGTTCGCCACGTGTTTCAATTCATTCGGAGGTATGAAGTTCTTCTTCCCCAATCTACTAAAATGGATCGGACGAGCGGGAGTCAAAATCCACACTCAGCTGGCCGAGGAGATCCGATACGCTGTCAGATCCAACGGTGGAAAAATCACGATGGCTTCCATCGAACAGATGCCGTTGACGAAGTCCGTCGTGTACGAGGCTTTACGGATCGAACCGCCGGTTCCGTTACAGTACGGGAAAGCAAAGCGCGATCTTCTGATCGAGAGCCACGACGCAGCGTTTAAGGTGAAAGAAGGGGAGTTGATATTCGGTTACCAACCGTTTGCTACGAAGGATCCGAAAATATTCGAAAGACCCGAAGAGTTTGTTGCAGGTCGGTTCGTGGGGGAGGAAGGGGAGGAGTTGCTCAAGCACGTGCTGTGGTCAAACGGACCGGAGTCGGAGAATCCGACGGTCGGGAATAAACAGTGTGCAGGGAAAGATTTCGTGGTGTTAGTCTCAAGGCTTTTGGTAATAGAGTTGTTTCTGCGGTATGATTCGATCGAGATTGAAGTCGGAACGTCGCCGTTAGGGGCTGCCGTTGCCGTAACTTCACTGAAGAGGGCGAGTTTTTGA 1542 50.39 MAATYLAFPSLLPPTARSSTTKSFGHNSYNVRPILASSPHVEESTKLPIRKIPGNYGLPFIGPIKDRFDFFYNQGRDDYFKSRIQKYQSTVFRANMPPGPFISPNPNVVVLLDGKSFPVLFDVTKVEKKDLFTGTFMPSTDFTGGYRVLSYLDPSEPNHGKLKQLMFFHLTARRDEVIPQFHSSYTELFESLENDVSSEGKANFGEANDRAAFNFLARSLYGVDPVATKLGLDGPSLIGKWVIFQLSPLLTLGLPKILEDLLIHTFPLPSFLVKSDYNRLYAFFYESSEFLLEEGRRLGLSKEETCHNLLFATCFNSFGGMKFFFPNLLKWIGRAGVKIHTQLAEEIRYAVRSNGGKITMASIEQMPLTKSVVYEALRIEPPVPLQYGKAKRDLLIESHDAAFKVKEGELIFGYQPFATKDPKIFERPEEFVAGRFVGEEGEELLKHVLWSNGPESENPTVGNKQCAGKDFVVLVSRLLVIELFLRYDSIEIEVGTSPLGAAVAVTSLKRASF 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11734720 11736392 - Conep07aG0184200.1 Cone7ag1789 442385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1789 513 Pfam Cytochrome P450 339 487 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone7ag1789 513 CDD CYP74 81 506 - -
Cone7ag1789 513 PANTHER CYTOCHROME P450 26 52 487 - GO:0009535(PANTHER)|GO:0009695(PANTHER)|GO:0009941(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Cone7ag1789 513 PRINTS E-class P450 group IV signature 366 382 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone7ag1789 513 PRINTS E-class P450 group IV signature 419 437 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone7ag1789 513 PRINTS E-class P450 group IV signature 466 484 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone7ag1789 513 FunFam Allene oxide synthase, chloroplastic 47 513 - -
Cone7ag1789 513 Gene3D Cytochrome P450 47 513 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone7ag1789 513 SUPERFAMILY Cytochrome P450 48 494 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1274 Cone-Chr10:9785795 Cone7ag1789 Cone-Chr7:11734720 7.49E-132 dispersed
Cone3ag1324 Cone-Chr3:32186773 Cone7ag1789 Cone-Chr7:11734720 6.00E-129 dispersed
Cone12ag1126 Cone-Chr12:9073403 Cone7ag1789 Cone-Chr7:11734720 4.15E-178 wgd
Cone17ag1313 Cone-Chr17:9317475 Cone7ag1789 Cone-Chr7:11734720 2.49E-290 wgd
Cone20ag0160 Cone-Chr20:698999 Cone7ag1789 Cone-Chr7:11734720 1.03E-292 wgd
Cone4ag1880 Cone-Chr4:13437908 Cone7ag1789 Cone-Chr7:11734720 0 wgd
Cone7ag1789 Cone-Chr7:11734720 Cone8ag1170 Cone-Chr8:10108017 2.24E-189 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1789 K01723 - sly:606711 749.584