Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1804 ATGACGTCGGAAGGAGTAATGTCGGGGCCGGCGAGTAGGAGGAAGCCGTCGTGGAGAGAGATGGAGAAAAACAAGAGGAGGGAAAGGAGAAGGAGAGCTATAGCAGCGAAGATATACGCAGGGCTTAGATTTCAGGGGAACTATAATTTGCCTAAGCACTGTGATAACAACGAAGTACTTAAAGCTCTCTGTGCTGATGCTGGTTGGACTGTCGAGGAGGACGGCACTACCTATCGCAAGGGATGCAAGCTACCGCCAATTGACATTCCGGGAACATACACCAAAATCACTCCATTTTCTTCCCAGAATCCGAGTCCATTATCTTCATCAATTCCAAGCTCAATTCCTCCCTATCAAGTCAGTCCCTCCTCATCATCCTTCGCAAGTCAATCTCGTTTCGATGCAAGTAACCCATCCAATCTCATCCCCTATCTTCGCCAAGCCATTCCAACCTCTCTTCCTCCTTTACGCATTTCTAACAGTGCTCCTGTAACTCCTCCCGTCTCTTCCCCAACATCAAAGAATCCCAAGCCTATACCCAATTGGGAAGCTATTGCCAAAGAATCCATGCTATCATTAAACTACCCTTACTTTGCTGTATCTGCTCCAGCTTGCCCAACCCATCACTGGATTCATTCTCCTATCCCCGAATGTGACGAGTCTGATTCATCCACAGTCGATTCCGGCCATTGGGTAAATTTCCGGTCATATGCACCATATGCGACTGTAATGCCCCCATACCCAACTTTTAACCTCGTGAAACCTGCGGCTCAGCCTAATTTCGGGAATAATGCAATCAATGAAAAAAAAAGGGCCCATGAATTTGAGTTCGAAGGTAACAAGGTGAAGCCATGGGAAGGGGAGAGAATTCATGAGGTTAGATTGGATGATTTGGAGCTCACGCTTGGAAGTGGTAGGACTTAG 924 47.19 MTSEGVMSGPASRRKPSWREMEKNKRRERRRRAIAAKIYAGLRFQGNYNLPKHCDNNEVLKALCADAGWTVEEDGTTYRKGCKLPPIDIPGTYTKITPFSSQNPSPLSSSIPSSIPPYQVSPSSSSFASQSRFDASNPSNLIPYLRQAIPTSLPPLRISNSAPVTPPVSSPTSKNPKPIPNWEAIAKESMLSLNYPYFAVSAPACPTHHWIHSPIPECDESDSSTVDSGHWVNFRSYAPYATVMPPYPTFNLVKPAAQPNFGNNAINEKKRAHEFEFEGNKVKPWEGERIHEVRLDDLELTLGSGRT 307
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11802434 11806915 + Conep07aG0185800.1 Cone7ag1804 442400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1804 307 MobiDBLite consensus disorder prediction 1 29 - -
Cone7ag1804 307 Pfam BES1/BZR1 plant transcription factor, N-terminal 12 136 IPR008540 -
Cone7ag1804 307 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 12 307 IPR033264 GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0940 Cone-Chr6:4839207 Cone7ag1804 Cone-Chr7:11802434 7.21E-54 dispersed
Cone7ag1804 Cone-Chr7:11802434 Cone9ag0944 Cone-Chr9:4662970 8.85E-51 dispersed
Cone4ag1892 Cone-Chr4:13494607 Cone7ag1804 Cone-Chr7:11802434 7.72E-160 wgd
Cone7ag1804 Cone-Chr7:11802434 Cone8ag0795 Cone-Chr8:7987106 4.75E-77 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46594 PF00010 HLH 3.60E-14 No_clan Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1804 K14503 - csv:101219853 370.163