Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1818 ATGGCCGACCGCTTCGATTCCGGTTCCCGTCCCCACCTCCTCGTGACCTCTCCCCACCAGATCTCCAGAGATGTTCAAGTTTCTGACAATCCTATCCCACTGTCACCTCAGTGGCTTCTGCCCAAGCCAGGAGAGAGTAAAACTGGACCAGGAAATGGGAAAACCATTCATCCTGGTTATGGGAGTCGCTCTGATATGCTGGCGACATCAGAAAATGGTGGGCAGATGCAACCCACTCCTAAGAAGAAGGATGTTTTCAGGCCATCCTTGCTTGACATGGAAACGGGTAGGCGTGACTGCTGGCGTGATGAAGAAAGAGACTCCCATTCTTCAATGAAGAAAGACCGTTGGAGGGATGCTGAAAAAGAGCCTGGTGAGAATCGTAGGACAGATCGATGGAATGACAATTCATCGTCAAAACACTTTGGGGAGTCTCATCGAATTCCATCAGAAAGGTGGACTGATTCGGGTAATACGGATACCAATTATGACCAACGGCGTGAGAGCAAATGGAACACTCGTTGGGGACCTGATGACAAGGATGCAGAAGGTTCGCGTGAGAAGTGGGGGGTATCAGGGAAAGATGTTGATCAATATGTTGAGAAAGGTTTGTCTCATGTTACTAATCATGGAAAGGATGATAAGGATGGAGAACCTTACCGTCCATGGCGACCCAGCACCACCCAAAACCGAGGAAAAGGAGCACCTAATCAAACTCTGACACCTAACAAACCAGTTTCTCAATTATCCTACAATCGTGGCCAGAATCCGCATGCAACCTTTTCTATGGGTCGTGGAAGGGTTGGCTCTGGAGGAAGCTTTACGAATTCAACTTCTAATAAATCTCAGCCTCTGGGTTCTATCATAGATAAATTTGAAGGAGGCCATGGAGAACCTTATCCCGTGAAGTATAATAGAATGAACTTGCTGGATGTATACCGCTTGACTGATCTGAGAACAAATCGAGATATAGCAGATGTATTTGTGCCAGTGCCATCTCTTACACTGGATGAACCCTTAGAGCCTCTAGCGCTTTGTGAACCAAATTTGGAGGAGATGACTGTTCTGAAGGGAATTGATAAGGGAGATATTGTAAGTAGTGGCGCACCTCAAGTATCAAGGGATGGGCGAAACTCATCCGATTTTACACAGCCAAGAATAACGAAGCTTGGCAGCAGAGATGATCTGCCTCATTCTCTTGATGAAAGCACAGAGGAAAATTCTGACACTATAAAAGCTGGTAACATTAGTTACTCGGTTGGCTCTTCCTATGAAAGGCAGGTGCTGTATCATGGTTCCCAGTCGAAAATGGAGTCAACACAAGAACATAAGACACATGCTGGTACCAAGTTCAGTGATGAAGCTTTCAGAGAAGGTGGTAGTAACAGAAAGGAAGCCCCTTTAGATAGGGAATCAATTGCTAAGGGAAGTGTTTCTGTTCATCCTGGTACTTCATGGCAGGCTTCACCTCTGGGAGATCGTGCACACCAATTTCTGCCTGATAAGGGCTTCTTATTACCTTCAAAGGATCTTAATAATGAATGGGAGAGTAATTTGACTCGTCCATCTTACCCTAGAGATGATGCGAAACACCCTGTTGGTGAGGATTCTAGTATCAGAAGGCAGCTATCTGGAATTCTGGAGAGGGAACAGCAGGCAAGGAAACCTTTGCAGTCTTCTCCAGAGGACCTATGGCTTTATTACAAAGATCCTTCTGGTGTAATTCAAGGGCCTTTTACAGGGCTTGATATTATTGGGTGGTTTGAGAGTGGGTATTTTGGCTTAGAATTGCCAGTCAGGGTGGCAAGTGCTCCAAATGAAATGCCATTTTCATCACTTGGTGATGTCATGCCCCATTTGCGTTCTAAAGCCAAGCCTCCACCTGGTTTTACAGGTCCTAAACCGAATGAACCAACAGATCCATCCAGTTACCCAAGCTTCAGTGGCTTTGGAAAGCTTCATAGTGGTTTGAGTGAGATGGATAGGGTGAGGAATGAGACAAGGCCCAAACTTTGCTCTGCTACCGAAGCTGAAAATAGGTTCTTGGAGTCATTGATCTCTGGTAATTTGAGTGGCGTAGCTCTGGAGAAATCTGCCTTTTCTGAAGGTATGCAAAGTTACTTTGGAAATACTTCTAATAGCTTGCCCTCCATGGGAGGGGATGATGGAAACAATCTTCTTTTGCTGGCTAAAAAAATGGCACTCGAAAGGCAGCAGTCTCTACCTAGCCCTTATCAACACTGGCCGGGGAGAGATGCTGGGCCTACGGTCACCAAGGCAGAAATTGGTCAGGACTCCTCAACAGCACATTCGAAACATCACACCCCTCAGTCGCAGGGTTCTGATTTGATGTCTATTCTCCAAGGCTTATCTGATAGACCAGCATCTAGCATTACTAATAGTGCGCTGGGTTGGCCAAAGTTTTCTGCTCAACATGCCCCTGATCCACTTCAGAACAAGATTGACTTGAATTACGAGCAGAACTTCCCTTCTCAAACATCATTTGGGATTCAACAACAGAGGTTGCAACCTCAGAATCAACCATTAATGAATCTACTTTCTCAGGCTGTTGAAAATCCCTCTGGTATTTCGGCAGCAGAGAAGTTACTCTCTTCCAGTCTACCCCATGATCCCCAATTGTTAAATGCATTGCAACAGCATTATCTCTTGCAGTTACATTCCCAGTCTACATTTCCGACCCAGCAGATGCTACTGTTGGATAAAATCATGTTACTAAGGCAGCAGCAACAGAAACATGAGGAACAACAACAGATATTAAGGCAGCAACAATTGCTGTCTCAAGTTCTATCAGATCACCATTCTAATCAGCTTGTTAGTGAACAATCTTATGGACAGTTACCGGCTGCTCCAGTATCTATAGGGAATAAACCTGCAGATTCTTCTCGACAGCAGCCAACTCAGGAGATGCTTCATGTTGGTTTGCAACCGCCTCTTTTTAATATGCAGGATCAACAGGCTTCGAATGTAGGAAATTTGCCTATGCAAGGTACCCAAGATATGGGTTATGATACCAGCTCAGAAAGCTCATCCTTTCTTCTTCCGCATCAACTTTCTGGTAATATTCCCCATCAGAGAAGTTGGGGTGTTACTCCTTCAGACCAGGTCACCGACATTCATCGGACAGAGATGTCTCCGGTTCCAAAGTATGTCGAGAGTTCAACCTTGCCTGAGATGACTATCAGATTAGTAGAGGATCCCTGTCTTCTACAGAAGCCCCACCCCACCTCTGAGTGCAATGCTACTGAAAATTTGGAACAGGCATCAGAACAAGCTCTGAAAGTAGATACTGTCACAGTTTTAGAATCAGATTCGCTAGCTGCTGAGAGTGCTGATGTCTCTGTTGCTGATAACAAAATGTCTGTTACTGAGAATGGTAATGACGTGAAGATCACACCGGAGAGTGTATATGAAGAACAACAGGTTGAAAGGAATGCATGGAAAGATGATCACAGTACACAGGAAGAAGTGGAACGGGTTGATATTCCTGAACCTAGAAAAGGTTCTGAAAAGAAGACTAAGAAGCAGAAATCTTCAAAGTCACACTCCACTTCCGAGCTGGCTAAAATGGTGTCCAAGACTTCTGTGCGGAACTCAAAGAAGCCTGACAATGGAAAACCAGAATCTAATGATTTGGAATTGGATGCAGATCTCTTTGAAGGGGATAACAAAGACGAGAAAACCTCTTCTGTAGCTGGATATTCTCAAGCAGTACAGAGTTCAATACCTACAAGTCTTTCGGTGGATGATATTGAATCTGTTGAAGTTGTCAAGGATAAATCGTTACCTGTTGGATCTGCCTCTGGGCCAAACACACAAACACTGAATGGACCAAGAGCTTGGAAGCATGCTCCTGGTTTCAAGGCCAAGTCCTTATTGGAAATTCAAGAGGAAGAGCAGAAAAGAGCGCAGACTGAAATGGTTGTACCTGAGGTCACTTCTGTCAACCACCCCAATTTGCCAACTCCTTGGGCTGGAATTGTTGGCAGTTCAGATGTTAGAGCTGTGAGAGAAACTCAGAGAGATTCTGGCAACACCGAATCAAATCTTGTCAAATCTGAACCTTCACTGGATTCAAAGAGCAACAAGAGCCAATTGCACGATCTTTTGGCTGAAGAAGCTTTGCTGAAGTCCAGAGCAGGAGATGCTAAGGTTCCAGACTATCCACCATTAATGACTGCACCTTCTGAGTCTTTTGATAATGAAAATTTTATCGTGGCTAAAGAGACCAAAAAGAGCCGCAAGAAATCTGCAAAAGCTAAGGTTGCTGGTACCAAGGCCTCAGCACCCACTGCTTCTGTTGAAATTCCTGCGAGTTCAAGTCTTGCTGAGAAGGCTAAAAGCTCTCGTTCCTTACAGCCGGAGAAGGAAGTATTACCTCCCATACCATCAGGACCTTCTTTGGGTGATTTTGTTCTATGGAAGGGAGAGTCAACTGGCTCCCCTCCTACTCCAGCATGGTCTACTGACTCTGGAAAAGTCCCTAAACCAGCATCTTTAAGGGAGATACAAAAAGAGCAAGAGAGAAGGTTTTCCTCACAGCATCCAAACCAAATGCCAACTCCTCAAAAATCCCAGCCAGCCCAAGCTGCCCGCAGCAATGCTCCTTCATGGGCTTTTTCTGCCGCTTCTCCACCTAGGGCTTCATCACCGATTCAGATCAACTCACAAGCTTCTCAGTCAAAATTTAAAGCGGATGATGACTTATTTTGGGGCCCAATTGACCAGTCAAAGCAAGAAACTCTGCAGACGAAATTCTTGCCTCTTGCTACCCAAAACAGTTGGGGAGCCAAAAACGCGCCTGGAAAAGGAACCTCCGCCAGTTTACTTAGTCGACAAAAGTCTAATGGTAAAACCTCTGGAAGCTTTCTTGCATCCTCTCCTGCTCAATCATCTCTGAAAGGGAAAAGAGATGCCGTGACGAAGCATTCAGAAGCCACAGACTTCAGAGATTGGTGTGAGAGTGAATGTGTTAGGCTTATTGGAACCAAAGATACGAGCTTTCTTGAATTTTGCTTGAAGCAATCTAGATCAGAGGCTGAGCTGCTTCTGAAAGAGAACCTCGGATCTTATGATCCAGACCATGAGTTCATAGAAAAATTCCTCAACTACAAGGAGTTGTTACCATCAGATGTCCTTGACATTGCCTTGCAAAGTAGTCGGAATGATCGTAAGGCGACTGGATCAATAGCCAGAGATGTGATTTCTGATGACACAGGCATATGGGGGGATACTGACAGCGGCAATCTCACAGTGGGCCCCAATGAGGGTTCCACAAAGGGTGGAGGAGGCAAAAAGAAGGGGAAGAAAGGGAAGAAGGTAAGTCCAGCAGTTTTGGGATTTAACGTTGTCAGCAACAGAATCATGATGGGTGAGATCCAGACTGTCGACGACTAG 5415 45.26 MADRFDSGSRPHLLVTSPHQISRDVQVSDNPIPLSPQWLLPKPGESKTGPGNGKTIHPGYGSRSDMLATSENGGQMQPTPKKKDVFRPSLLDMETGRRDCWRDEERDSHSSMKKDRWRDAEKEPGENRRTDRWNDNSSSKHFGESHRIPSERWTDSGNTDTNYDQRRESKWNTRWGPDDKDAEGSREKWGVSGKDVDQYVEKGLSHVTNHGKDDKDGEPYRPWRPSTTQNRGKGAPNQTLTPNKPVSQLSYNRGQNPHATFSMGRGRVGSGGSFTNSTSNKSQPLGSIIDKFEGGHGEPYPVKYNRMNLLDVYRLTDLRTNRDIADVFVPVPSLTLDEPLEPLALCEPNLEEMTVLKGIDKGDIVSSGAPQVSRDGRNSSDFTQPRITKLGSRDDLPHSLDESTEENSDTIKAGNISYSVGSSYERQVLYHGSQSKMESTQEHKTHAGTKFSDEAFREGGSNRKEAPLDRESIAKGSVSVHPGTSWQASPLGDRAHQFLPDKGFLLPSKDLNNEWESNLTRPSYPRDDAKHPVGEDSSIRRQLSGILEREQQARKPLQSSPEDLWLYYKDPSGVIQGPFTGLDIIGWFESGYFGLELPVRVASAPNEMPFSSLGDVMPHLRSKAKPPPGFTGPKPNEPTDPSSYPSFSGFGKLHSGLSEMDRVRNETRPKLCSATEAENRFLESLISGNLSGVALEKSAFSEGMQSYFGNTSNSLPSMGGDDGNNLLLLAKKMALERQQSLPSPYQHWPGRDAGPTVTKAEIGQDSSTAHSKHHTPQSQGSDLMSILQGLSDRPASSITNSALGWPKFSAQHAPDPLQNKIDLNYEQNFPSQTSFGIQQQRLQPQNQPLMNLLSQAVENPSGISAAEKLLSSSLPHDPQLLNALQQHYLLQLHSQSTFPTQQMLLLDKIMLLRQQQQKHEEQQQILRQQQLLSQVLSDHHSNQLVSEQSYGQLPAAPVSIGNKPADSSRQQPTQEMLHVGLQPPLFNMQDQQASNVGNLPMQGTQDMGYDTSSESSSFLLPHQLSGNIPHQRSWGVTPSDQVTDIHRTEMSPVPKYVESSTLPEMTIRLVEDPCLLQKPHPTSECNATENLEQASEQALKVDTVTVLESDSLAAESADVSVADNKMSVTENGNDVKITPESVYEEQQVERNAWKDDHSTQEEVERVDIPEPRKGSEKKTKKQKSSKSHSTSELAKMVSKTSVRNSKKPDNGKPESNDLELDADLFEGDNKDEKTSSVAGYSQAVQSSIPTSLSVDDIESVEVVKDKSLPVGSASGPNTQTLNGPRAWKHAPGFKAKSLLEIQEEEQKRAQTEMVVPEVTSVNHPNLPTPWAGIVGSSDVRAVRETQRDSGNTESNLVKSEPSLDSKSNKSQLHDLLAEEALLKSRAGDAKVPDYPPLMTAPSESFDNENFIVAKETKKSRKKSAKAKVAGTKASAPTASVEIPASSSLAEKAKSSRSLQPEKEVLPPIPSGPSLGDFVLWKGESTGSPPTPAWSTDSGKVPKPASLREIQKEQERRFSSQHPNQMPTPQKSQPAQAARSNAPSWAFSAASPPRASSPIQINSQASQSKFKADDDLFWGPIDQSKQETLQTKFLPLATQNSWGAKNAPGKGTSASLLSRQKSNGKTSGSFLASSPAQSSLKGKRDAVTKHSEATDFRDWCESECVRLIGTKDTSFLEFCLKQSRSEAELLLKENLGSYDPDHEFIEKFLNYKELLPSDVLDIALQSSRNDRKATGSIARDVISDDTGIWGDTDSGNLTVGPNEGSTKGGGGKKKGKKGKKVSPAVLGFNVVSNRIMMGEIQTVDD 1804
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11849744 11859697 - Conep07aG0187200.1 Cone7ag1818 442414

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1818 1804 SUPERFAMILY GYF domain 553 620 IPR035445 -
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 738 781 - -
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 1130 1250 - -
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 1147 1177 - -
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 620 645 - -
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 1318 1337 - -
Cone7ag1818 1804 Gene3D - 549 631 IPR035445 -
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 1234 1250 - -
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 13 33 - -
Cone7ag1818 1804 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1804 - -
Cone7ag1818 1804 CDD GYF 562 620 IPR003169 GO:0005515(InterPro)
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 437 471 - -
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 1348 1370 - -
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 161 221 - -
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 1519 1566 - -
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 1189 1204 - -
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 516 537 - -
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 371 387 - -
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 1343 1371 - -
Cone7ag1818 1804 ProSiteProfiles GYF domain profile. 563 614 IPR003169 GO:0005515(InterPro)
Cone7ag1818 1804 Pfam GYF domain 567 603 IPR003169 GO:0005515(InterPro)
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 521 537 - -
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 1415 1566 - -
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 1 282 - -
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 1751 1779 - -
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 1438 1454 - -
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 363 413 - -
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 1268 1289 - -
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 85 153 - -
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 432 486 - -
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 1599 1645 - -
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 1205 1219 - -
Cone7ag1818 1804 SMART gyf_5 564 619 IPR003169 GO:0005515(InterPro)
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 760 781 - -
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 1599 1640 - -
Cone7ag1818 1804 Coils Coil 909 932 - -
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 223 259 - -
Cone7ag1818 1804 MobiDBLite consensus disorder prediction 391 408 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1818 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag0835 Cone-Chr18:5641929 Cone7ag1818 Cone-Chr7:11849744 1.05E-30 dispersed
Cone4ag1904 Cone-Chr4:13544747 Cone7ag1818 Cone-Chr7:11849744 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g930 Blo01g01558 . Bda01g00536 Bda03g00257 Bpe02g00397 Bpe04g00211 Bma04g00206 Bma01g02315 Cmo05g00241 Cmo12g00428 . . . Car12g00452 Sed11g1026 . Cpe07g00430 Bhi04g00258 Tan02g1949 Cmetu03g2269 . . . Lcy13g1995 Cla08g01498 Cam08g1988 Cec08g1563 Cco08g1700 Clacu08g1678 . Cre08g1461 Cone4ag1904 Cone7ag1818 . . . . . Cme03g01966 . . . . . . . . . . . Cma12g00478 Cma05g00232 Car05g00194 . Cpe11g00193 . . . . . . . . . . . . . . . Lsi08g01403 Csa02g02043 Chy03g01470 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004078 3 2 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 3 1 44