Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1834 ATGGAGTATAGGACGTCCTCTACTATGTACAAGAAACTTTCAAACGGGCACAGTTTTAATGATAAATCAGCATACGACGGCGTTTTTGCCGCTCCGACGAAGAAAGTTGGTGTTCCAAACTTTCCAGCTCAAGTCCAAGATTACAGGGAGATTTTCGGTGGCTCGAGAGGCTCATCGATACCGATTCTGGATATTCCGGCGCTAAATGAGAGAAAGCTTTCTGTTGATGTTCGGAGCTCGAATTTAGAGTATTCCAAGGTTTTTGGTGGCTTTGAAGAGCTAGATTTTGCAGTGCCTTATGATGAACAAATTTTTGTAGAACCAAAGAAAATGAAAACTACTTCTGTTGATCTCAAGAGCAGGACTGTGTCTAGAAAAAGTTCCTCTTTGACAGAGGAAGACCCTTTTGAATATCCCGAGGGGAATGGAGTTTCATCACATGAAGCATCACCATTTCAGTCATTTGATAGTGGGAAGAAGTTTAGCATGTCGTATCAAAAAACTAACCCCGGAACCAAAAATGGCACAAATGGGACCACTCACATAGCTCAACTCCATGCTGTCCCAGGTTATTCACGTTTAATAGATGAAGCCACTCCCTTTAGTGGAGGTGATAAGCCGGAATCTGGAATTTCAAAGGATGCGGAGGTAAAAAGTAATTTCAGTAAGGTGGCAGTGGAAGACGGCAAACCATCTGGAGCGGTAGATGATGCTTGCCTCAAAAATAGTTCGATCAAGGTGGAAATGGAAGAGAAGGTTTTGAAAGAAGATCTTTTGACTGTTGGTCCTACCAGACAGACTTCTAAATCTACTGAAATTCACAATGCAACTGATTGGTTTAAATTGAAATCAAGATCCAATTCAGTTGATTTCTTATTTGATGAATATAAAATGGATAAAGCTGCAAAATCTCCTAAAGTTCCAGAAGTTTCTAGAAAGCCACCCAAATTTGGTAGAAGCCATGGTTATTCACAGAGATCGATGGAGTTCAAATCTGGGGTTTGTGATGCTGGAAATGCTGATTCACCACCTTACTTTGAGGAGGAAATTGATGCGAATTCAGTTAATGCTGTCTCAGTGGAGGCTCTGAGAAAGGCAATAGAGGATGCTCAAGCAAGGATTAAATTTGCAAAGGAGTCTATGGAAAGAAGGAAGGATAGTCAAAATCGGAGGAAACCAGGTTTTAGTAATGGGGTGAATACAAGGAGAGAAGAGAAAAGGATTTCAGGCAATGCCAGTAAACCTAAAGGGAAGGAGGTTGGGGAAACGTGCAGAAACACTGATATTCCAGTTCAAATTACTTCAGGTAGCACAGAGCAAATTTCAACTAGGACAAACTCAGAAGCAGCTGCTGTAGAAACATATAGGAAAGTATTTAGGTCGGATCAAGTTAAATGTACACAGGGAGAAGCCGGACATTCTGAAGGAGAAGAATGCTGGTATGATCTGGGTAATGCATTTGAAGACGAAGCGAGAAGACCAGGGCTTGAAAATGCAGTTGATAAAAGTAAGGATCTGCAATTTGTTAATGACTATGAGCAGGGGGAAAGTCAAGAGACCAATTTAACTTCTGAGAATCTAGTAAAGTTTAATGAGAGATTGGCAGGATTTGACGAGGCTCGTGAACAGGAGAAGATAGAAAAGAGAAATGGAGAAGGCGATTTTGGCAAATATGTATGCGTATCAAAGTCACTTCAGGAGATTCAAAATCAGGATGATAATCAAAAGAGAATAGAAGTTTCTCAAGAAATGGAAGAAATGAGAATTCAAGTTGCAACCCATGGAGAGGAAACGTGTCAAAAGATGCTGGAAGAGTCGCAGGGTCCAACAGAAGACAGAAAAGTGGAGACCAGAGAATCAGATGAGAACAAAATTTCAAAGATACAAATACAGGATCGTGAGTGGGTAGATAAAGAAGAGATGAAAAGGGTTTTGAAGCAAGAAGAAAACGAGATTGACCAGAAGAATGTGAATGTTCATATGGGTGAGGAAACTGAAAAGGAGCAGGATAAAGTTGATGAACAGGAAATAGAAATAAACTGGAATAATGACTCCTGTAAGGGGGGAGAAACTGAGGGACTTAAAAACAATGATGTTACAGAGGATACCATGAAGCTTCAAGAGGCTGGAGAGAATGAGAAGATGTTAGGAGGGTTTTCAGAACGTATGGAAGAAAATGAAAAGAGATATGAACCAATTGACGAAGTGAAGGGGATACAGACACAAATTGATAAAAGTGCAGAAGTTGAGGACTTGGCAAAAGAAAGTCAAGAGGATCTGAATAACTGTGAGAATAAGCTTGAGAAAGCTGACGATTTCCGGGTGCCCTCTGAAAGTGAAATTCTACTGGAAAAGGAGGGAGCAGGTAGACCTGTACAAACTGATTTAACTATGGAAGTCACTGATGAAGTTAAGGAAGTAGTTGATCAAGATGTGGAAGTAATTCTGGAAGTGCCTAAATATGAAGAGACTGGAAATGTAATGGAAGTAACTGAAGCGGCAAAAAACATTGAGAGCGATTCAGAAGGAGAATTAGGGGAAGCTGACAGAGTGGAAAAAACTCTCCTTAGAACAGATTCCCTTGATGGAGGTATCCTCAGTGAAGAAACAAATAAAATGGAAGATATAAAAGACACCCTTGTTTCTGACCCGTGTGGGATGAACTTTGGTGAATTTAATATGGAATGTGGAAATATGCCAGATGACAAGCATGAGAAAGATCCCAGAAATGCCTGCATTTTGGAAAACCATGCTGAAGAATTAGCTCCTGACTTGGATGAAATGATTATGAATGTCGAGGAAGCTGAAGTAGCAATTGAGGAAACAGACGAGAATAATTCTAAGTCTGAGGAGAATATTTCTCAGTCCTCCCATGGAGAAGGATTGGTTGATGATTTAGAAAATGATGAGGCAGGTCTGCCATTCAGGATGTCAGAAGAATATGGGGATTCCACTGAAATTGATGAGGAGTCCATAACAAGCCAAGGTACAACAGAAAATGAAGAGAACCATTCTGAGAACATGACAATGGAGGGGAGGGAAAGTAACTATGGTATCACAGAATCTCTGCAATCGGGTACATTTGAAAGTTACAGAACCATGGAGCTGGCTCGGGACATCAGCAGAAGCCAAAATGCAACCGAAACCGAAGAGAGTGGAGAAGAGACAAAGACAGTAGAAGACATGGATGCCACTGATACTTTGGAGAAAGAAGCGAAGCTGAAATTTCATGTAGAACCAATTGAAGTGGTTGAGCAGCATAGTTTGCCTGAAAGAAGAGAGAAACCTGTGGAGACAGCACAAGAGATCATAACAAGCCCTAGTATTAGACAACATGGAGAGAATCATCAAACAACCGTAACATTTGAGGACATAGAAACTGATGATAAATTGCAAGAAGGGGGGCTGGAATCTGAAGTGAACAACCAGGGAGCAGAGCAGGCGCCTGTCATTCCTCAAGGAAAGGGAACAGATCAGGAAATTTCTGAGGAAATCAAAACAAGACAGAGAGCTATGGAAAATGAGGAGAATCATCAATCGACCGTAACATCAGAGGTGAAGGAGACCAATGAAAAAAGTGAAAAAGAAATGGAGCTAGAAAAGAAGCGGAGAAAAAGAATTGAAGCAAGAGAAAGGGAAAGGGAGAGAGAAAGAGAGAAAATAGCTGTGGAAAGAGCTATCCGGGAGGCTCGTGAAAGGGCATTTGCTGAAGCACGAGAAAGAGCTGCTGCAGAAAGAGTATCTGCTGAAAATCGCAGAAGACAGGTGGCTGAGGCAAGAGAAAGAACAACAAAAACTTCTATGGGGAATAATGATAATAACAGAGCCGAGAAGGCTTCTATGGAAGCCAAGCTAAAAGCTGAACGTGCTGCTGTTGAGAGGGCTACTGCAGAGGCTAGGGAGCGTGCACTAGATAAAGCAATGTCTGAAAAGGCTTTCCTGGAGGCAAGGAACCTTGCTGAGAAAATGGTTGCCGATAAACTTTCTACTACTACAAGGGATAGACGGGATCATTCATCCAATGGTTCGCAGCAGAAAGCATCAAGTGCTTCTAGCAGTTCAAGATATGAAAGTGCCTCAAATAATGGAGCTGCTGATTCACCTGAGAGGTTCACTGGGTCGGCTGGGGAATCTGCTCAGAGGAGTCAAGCTAGGTTGGAGAGGCATCAACGAACAGTGGAGCGTGTGGCAAAAGCTCTTGCAGAAAAGAATATCCGTGACGTTCTTGCACAGAAGGAGCAAGCAGAGAGAAATAGATTAGCTGAAGCCCTTGATGCTGATGTTAAAAGGTGGTCGAGTGGGAAGGAAGGAAACTTGCGTGCATTGCTTTCAACCTTACAATATGTTCTTGGGCATGATAGTGGCTGGCAAGCAATTCCTCTAACAGATATAGTCACAGCGGCTTCTGTCAAGAAAGCTTACCGTAAAGCAACTCTCTTTGTTCATCCGGACAAATTGCAACAACGTGGTGCTACCATTCAGCAGAAATACATCTGTGAAAAGGTTTTCGATCTTCTAAAGGCGGCTTGGAACAGGTTCAACAGGGAAGAGCGGTAG 4557 41.98 MEYRTSSTMYKKLSNGHSFNDKSAYDGVFAAPTKKVGVPNFPAQVQDYREIFGGSRGSSIPILDIPALNERKLSVDVRSSNLEYSKVFGGFEELDFAVPYDEQIFVEPKKMKTTSVDLKSRTVSRKSSSLTEEDPFEYPEGNGVSSHEASPFQSFDSGKKFSMSYQKTNPGTKNGTNGTTHIAQLHAVPGYSRLIDEATPFSGGDKPESGISKDAEVKSNFSKVAVEDGKPSGAVDDACLKNSSIKVEMEEKVLKEDLLTVGPTRQTSKSTEIHNATDWFKLKSRSNSVDFLFDEYKMDKAAKSPKVPEVSRKPPKFGRSHGYSQRSMEFKSGVCDAGNADSPPYFEEEIDANSVNAVSVEALRKAIEDAQARIKFAKESMERRKDSQNRRKPGFSNGVNTRREEKRISGNASKPKGKEVGETCRNTDIPVQITSGSTEQISTRTNSEAAAVETYRKVFRSDQVKCTQGEAGHSEGEECWYDLGNAFEDEARRPGLENAVDKSKDLQFVNDYEQGESQETNLTSENLVKFNERLAGFDEAREQEKIEKRNGEGDFGKYVCVSKSLQEIQNQDDNQKRIEVSQEMEEMRIQVATHGEETCQKMLEESQGPTEDRKVETRESDENKISKIQIQDREWVDKEEMKRVLKQEENEIDQKNVNVHMGEETEKEQDKVDEQEIEINWNNDSCKGGETEGLKNNDVTEDTMKLQEAGENEKMLGGFSERMEENEKRYEPIDEVKGIQTQIDKSAEVEDLAKESQEDLNNCENKLEKADDFRVPSESEILLEKEGAGRPVQTDLTMEVTDEVKEVVDQDVEVILEVPKYEETGNVMEVTEAAKNIESDSEGELGEADRVEKTLLRTDSLDGGILSEETNKMEDIKDTLVSDPCGMNFGEFNMECGNMPDDKHEKDPRNACILENHAEELAPDLDEMIMNVEEAEVAIEETDENNSKSEENISQSSHGEGLVDDLENDEAGLPFRMSEEYGDSTEIDEESITSQGTTENEENHSENMTMEGRESNYGITESLQSGTFESYRTMELARDISRSQNATETEESGEETKTVEDMDATDTLEKEAKLKFHVEPIEVVEQHSLPERREKPVETAQEIITSPSIRQHGENHQTTVTFEDIETDDKLQEGGLESEVNNQGAEQAPVIPQGKGTDQEISEEIKTRQRAMENEENHQSTVTSEVKETNEKSEKEMELEKKRRKRIEAREREREREREKIAVERAIREARERAFAEARERAAAERVSAENRRRQVAEARERTTKTSMGNNDNNRAEKASMEAKLKAERAAVERATAEARERALDKAMSEKAFLEARNLAEKMVADKLSTTTRDRRDHSSNGSQQKASSASSSSRYESASNNGAADSPERFTGSAGESAQRSQARLERHQRTVERVAKALAEKNIRDVLAQKEQAERNRLAEALDADVKRWSSGKEGNLRALLSTLQYVLGHDSGWQAIPLTDIVTAASVKKAYRKATLFVHPDKLQQRGATIQQKYICEKVFDLLKAAWNRFNREER 1518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11939248 11945257 + Conep07aG0188900.1 Cone7ag1834 442430

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1834 1518 MobiDBLite consensus disorder prediction 1262 1276 - -
Cone7ag1834 1518 MobiDBLite consensus disorder prediction 377 423 - -
Cone7ag1834 1518 MobiDBLite consensus disorder prediction 1085 1116 - -
Cone7ag1834 1518 Coils Coil 746 773 - -
Cone7ag1834 1518 Coils Coil 1379 1418 - -
Cone7ag1834 1518 Coils Coil 925 952 - -
Cone7ag1834 1518 Coils Coil 360 387 - -
Cone7ag1834 1518 MobiDBLite consensus disorder prediction 940 1017 - -
Cone7ag1834 1518 Coils Coil 1190 1233 - -
Cone7ag1834 1518 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 9 1518 - GO:0005737(PANTHER)|GO:0030276(PANTHER)|GO:0031982(PANTHER)|GO:0043231(PANTHER)|GO:0072318(PANTHER)|GO:0072583(PANTHER)
Cone7ag1834 1518 MobiDBLite consensus disorder prediction 116 151 - -
Cone7ag1834 1518 MobiDBLite consensus disorder prediction 1277 1304 - -
Cone7ag1834 1518 Coils Coil 1278 1317 - -
Cone7ag1834 1518 MobiDBLite consensus disorder prediction 1101 1116 - -
Cone7ag1834 1518 MobiDBLite consensus disorder prediction 1342 1381 - -
Cone7ag1834 1518 MobiDBLite consensus disorder prediction 708 729 - -
Cone7ag1834 1518 MobiDBLite consensus disorder prediction 1241 1304 - -
Cone7ag1834 1518 Gene3D DnaJ domain 1391 1518 IPR036869 -
Cone7ag1834 1518 MobiDBLite consensus disorder prediction 427 449 - -
Cone7ag1834 1518 MobiDBLite consensus disorder prediction 1039 1064 - -
Cone7ag1834 1518 MobiDBLite consensus disorder prediction 1085 1099 - -
Cone7ag1834 1518 SUPERFAMILY Chaperone J-domain 1374 1517 IPR036869 -
Cone7ag1834 1518 MobiDBLite consensus disorder prediction 654 673 - -
Cone7ag1834 1518 MobiDBLite consensus disorder prediction 1131 1218 - -
Cone7ag1834 1518 MobiDBLite consensus disorder prediction 1241 1261 - -
Cone7ag1834 1518 MobiDBLite consensus disorder prediction 600 624 - -
Cone7ag1834 1518 MobiDBLite consensus disorder prediction 1328 1391 - -
Cone7ag1834 1518 MobiDBLite consensus disorder prediction 988 1003 - -
Cone7ag1834 1518 ProSiteProfiles dnaJ domain profile. 1454 1518 IPR001623 -
Cone7ag1834 1518 MobiDBLite consensus disorder prediction 962 976 - -
Cone7ag1834 1518 FunFam Auxilin-related protein 1 1389 1518 - -
Cone7ag1834 1518 Coils Coil 638 658 - -
Cone7ag1834 1518 MobiDBLite consensus disorder prediction 303 325 - -
Cone7ag1834 1518 MobiDBLite consensus disorder prediction 1044 1064 - -
Cone7ag1834 1518 MobiDBLite consensus disorder prediction 377 449 - -
Cone7ag1834 1518 MobiDBLite consensus disorder prediction 1159 1218 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1834 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag1834 Cone-Chr7:11939248 Cone9ag1217 Cone-Chr9:8858598 3.49E-52 dispersed
Cone4ag1922 Cone-Chr4:13635799 Cone7ag1834 Cone-Chr7:11939248 0 wgd
Cone6ag1638 Cone-Chr6:12565717 Cone7ag1834 Cone-Chr7:11939248 4.86E-63 wgd
Cone7ag1834 Cone-Chr7:11939248 Cone9ag1558 Cone-Chr9:11288162 3.37E-61 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g969 Blo01g01570 . . . . . . Bma01g02328 . . Cma01g01918 . Car01g01499 . . . . . . . . . . . . . . . . . . Cone4ag1922 Cone7ag1834 . . Lsi04g01688 Csa03g04228 Chy04g00487 . . . . . . . . . . Cmo01g01981 . . . . . . Cpe02g00118 . . . . . . . Cla05g01924 Cam05g2061 Cec05g2074 Cco05g2125 Clacu05g2055 Cmu05g1932 Cre05g2055 . . . Cme04g00546
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008012 0 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 8 1 0 35