Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag1843 | ATGGCTACTCCAGTTGCTCCCCCGGATGGAATTGGATCTGAAGGGAAACATTACTACTCAATATGGAATAACTTGTTCGAGATCGATACGAAATACGTGCCTATCAAACCTATTGGACGAGGTGCTTATGGTATCGTTTGCTCTTCCGTGAACAGAGAAACCAATGAGAAAGTTGCAATTAAGAAGATACACAATGCCTTTGACAACCGTACCGATGCAGTAAGAACTTTACGTGAATTGAGGCTTCTTCAACATCTTCGTCATGAAAATGTGATCGCATTGAAAGATGTCATGATGCCTATTCATAGAAGAAGTTTCAAGGACGTTTACCTTGTCTATGAACTCATGGACACTGATCTGCATCAGATCATCAAGTCTTCTCAGGCTCTCACCAATGATCACTCCCAATATTTCCTCTTTCAGTTGCTGACTGGCTTAAAGTATCTTCACTCGGCAAACATTCTTCATCGAGACTTGAAACCAGGGAATCTTCTTGTCAATTCAAATTGTGATCTGAAAATATGTGATTTTGGATTAGCCCGAACTAGCAATGGCAGGGATCAGTTTATGACAGAGTATGTTGTAACACGCTGGTATCGGGCCCCAGAGCTTCTTCTTTGCTGCGACTATTATGGAACATCAATTGATGTGTGGTCTGTTGGATGCATCTTTGCAGAGCTTCTTGGCAGGAAACCTCTTTTTCCGGGTACAGAATGTTTGAACCAGTTGAAATTGATTATTAACATACTTGGAAGCCAGAGTGATGAGGATTTGGAATTTATAGATAACGCAAAGGCAAGAAAGTATATCAAGTCAATCCAGTATTGTGTGGGGACCCCATTTTCTAGCCTGTATCCAACTGCTCATCCTTTGGCAATTGATTTGCTTCATAAGATGCTTGTTTTTGACCCGTCAAAGAGAATCAGTGTAACCGAAGCTTTGCAACATCCATATATGTCGGCACTTTATGACCCGAGTCGAAATACCGATGCCCAAGCGGCAGTTGATATTGAAATAGATGATGATTTAGGGGAAGAGATTATTAGGGAGATGATGTGGAAGGAAATGCTGAATTACCATCCTGAAGGTGCTAAAGATGGTGCGGAATTGGGGCAGGTGGTGGTGGCTTGA | 1131 | 41.91 | MATPVAPPDGIGSEGKHYYSIWNNLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIHNAFDNRTDAVRTLRELRLLQHLRHENVIALKDVMMPIHRRSFKDVYLVYELMDTDLHQIIKSSQALTNDHSQYFLFQLLTGLKYLHSANILHRDLKPGNLLVNSNCDLKICDFGLARTSNGRDQFMTEYVVTRWYRAPELLLCCDYYGTSIDVWSVGCIFAELLGRKPLFPGTECLNQLKLIINILGSQSDEDLEFIDNAKARKYIKSIQYCVGTPFSSLYPTAHPLAIDLLHKMLVFDPSKRISVTEALQHPYMSALYDPSRNTDAQAAVDIEIDDDLGEEIIREMMWKEMLNYHPEGAKDGAELGQVVVA | 376 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 11965721 | 11968651 | + | Conep07aG0189800.1 | Cone7ag1843 | 442439 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag1843 | 376 | Pfam | Protein kinase domain | 34 | 319 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag1843 | 376 | Gene3D | Phosphorylase Kinase; domain 1 | 19 | 355 | - | - | |
Cone7ag1843 | 376 | FunFam | Mitogen-activated protein kinase | 18 | 126 | - | - | |
Cone7ag1843 | 376 | CDD | STKc_TEY_MAPK | 26 | 361 | - | - | |
Cone7ag1843 | 376 | SUPERFAMILY | Protein kinase-like (PK-like) | 26 | 325 | IPR011009 | - | |
Cone7ag1843 | 376 | FunFam | Mitogen-activated protein kinase | 116 | 345 | - | - | |
Cone7ag1843 | 376 | ProSiteProfiles | Protein kinase domain profile. | 32 | 319 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag1843 | 376 | Gene3D | Transferase(Phosphotransferase) domain 1 | 116 | 345 | - | - | |
Cone7ag1843 | 376 | SMART | serkin_6 | 32 | 319 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag1843 | 376 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 26 | 357 | IPR050117 | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER) | |
Cone7ag1843 | 376 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 154 | 166 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone7ag1843 | 376 | ProSitePatterns | MAP kinase signature. | 67 | 170 | IPR003527 | GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag1843 | 376 | ProSitePatterns | Protein kinases ATP-binding region signature. | 38 | 62 | IPR017441 | GO:0005524(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone7ag1843 | Cone-Chr7:11965721 | Cone8ag0281 | Cone-Chr8:1625057 | 1.39E-143 | dispersed | |
Cone17ag1359 | Cone-Chr17:9508131 | Cone7ag1843 | Cone-Chr7:11965721 | 1.98E-230 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
83077 | PF01126 | Heme_oxygenase | 9.10E-06 | CL0230 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag1843 | K20535 | - | csv:101213478 | 643.654 |