Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1843 ATGGCTACTCCAGTTGCTCCCCCGGATGGAATTGGATCTGAAGGGAAACATTACTACTCAATATGGAATAACTTGTTCGAGATCGATACGAAATACGTGCCTATCAAACCTATTGGACGAGGTGCTTATGGTATCGTTTGCTCTTCCGTGAACAGAGAAACCAATGAGAAAGTTGCAATTAAGAAGATACACAATGCCTTTGACAACCGTACCGATGCAGTAAGAACTTTACGTGAATTGAGGCTTCTTCAACATCTTCGTCATGAAAATGTGATCGCATTGAAAGATGTCATGATGCCTATTCATAGAAGAAGTTTCAAGGACGTTTACCTTGTCTATGAACTCATGGACACTGATCTGCATCAGATCATCAAGTCTTCTCAGGCTCTCACCAATGATCACTCCCAATATTTCCTCTTTCAGTTGCTGACTGGCTTAAAGTATCTTCACTCGGCAAACATTCTTCATCGAGACTTGAAACCAGGGAATCTTCTTGTCAATTCAAATTGTGATCTGAAAATATGTGATTTTGGATTAGCCCGAACTAGCAATGGCAGGGATCAGTTTATGACAGAGTATGTTGTAACACGCTGGTATCGGGCCCCAGAGCTTCTTCTTTGCTGCGACTATTATGGAACATCAATTGATGTGTGGTCTGTTGGATGCATCTTTGCAGAGCTTCTTGGCAGGAAACCTCTTTTTCCGGGTACAGAATGTTTGAACCAGTTGAAATTGATTATTAACATACTTGGAAGCCAGAGTGATGAGGATTTGGAATTTATAGATAACGCAAAGGCAAGAAAGTATATCAAGTCAATCCAGTATTGTGTGGGGACCCCATTTTCTAGCCTGTATCCAACTGCTCATCCTTTGGCAATTGATTTGCTTCATAAGATGCTTGTTTTTGACCCGTCAAAGAGAATCAGTGTAACCGAAGCTTTGCAACATCCATATATGTCGGCACTTTATGACCCGAGTCGAAATACCGATGCCCAAGCGGCAGTTGATATTGAAATAGATGATGATTTAGGGGAAGAGATTATTAGGGAGATGATGTGGAAGGAAATGCTGAATTACCATCCTGAAGGTGCTAAAGATGGTGCGGAATTGGGGCAGGTGGTGGTGGCTTGA 1131 41.91 MATPVAPPDGIGSEGKHYYSIWNNLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIHNAFDNRTDAVRTLRELRLLQHLRHENVIALKDVMMPIHRRSFKDVYLVYELMDTDLHQIIKSSQALTNDHSQYFLFQLLTGLKYLHSANILHRDLKPGNLLVNSNCDLKICDFGLARTSNGRDQFMTEYVVTRWYRAPELLLCCDYYGTSIDVWSVGCIFAELLGRKPLFPGTECLNQLKLIINILGSQSDEDLEFIDNAKARKYIKSIQYCVGTPFSSLYPTAHPLAIDLLHKMLVFDPSKRISVTEALQHPYMSALYDPSRNTDAQAAVDIEIDDDLGEEIIREMMWKEMLNYHPEGAKDGAELGQVVVA 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11965721 11968651 + Conep07aG0189800.1 Cone7ag1843 442439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1843 376 Pfam Protein kinase domain 34 319 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1843 376 Gene3D Phosphorylase Kinase; domain 1 19 355 - -
Cone7ag1843 376 FunFam Mitogen-activated protein kinase 18 126 - -
Cone7ag1843 376 CDD STKc_TEY_MAPK 26 361 - -
Cone7ag1843 376 SUPERFAMILY Protein kinase-like (PK-like) 26 325 IPR011009 -
Cone7ag1843 376 FunFam Mitogen-activated protein kinase 116 345 - -
Cone7ag1843 376 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1843 376 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
Cone7ag1843 376 SMART serkin_6 32 319 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1843 376 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 26 357 IPR050117 GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cone7ag1843 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag1843 376 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1843 376 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag1843 Cone-Chr7:11965721 Cone8ag0281 Cone-Chr8:1625057 1.39E-143 dispersed
Cone17ag1359 Cone-Chr17:9508131 Cone7ag1843 Cone-Chr7:11965721 1.98E-230 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83077 PF01126 Heme_oxygenase 9.10E-06 CL0230 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1843 K20535 - csv:101213478 643.654