Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1849 ATGGCTTTCTTAGAACTCTCTGTGTCACTAATGCCTTTCATCCTATCCACCTTAACATTCTCATCTCATGCCCACCCAGGTTTCAACTTCGGTTGGGGCGTCGGTATTGGCAGTGGCGGGGGAGGTGGCAGCGGCGACAGCTATAATAATAATAGTTACTTTGGTCTCTTCCCCGACTTCTACCAATTTTCATGTCCTTATGCCAATGATATTGTAATGTCTGTTTTGGAAAATGCCATTTCAAAGCAACCCAGAATCGCTGCTTCTCTGCTTTGCCCTCATTTCCATGACTGCTTCGCGCAGGGCTGCAATGCATCAGTGTTGTTGGATAGTAGTGCTCAATTCGTGAGTGGAAAAGAATGCTCTTCCAAACATAAACTCCATAAGAGGATTCGAAATATCCTTGCTGTTGCTGCCCGTGCTTCCACCATTCTGAGTGGTGGGCCATCATGGGAGCTTCCTATAGGACGCAGAGACTCGAAAACAGCAAATATTAATCTCTCCAACACCAACATCCCACCTCCAAACTCCACGATCCAATACCTCTTGACCTTCTTCCAAAGCCAAGGGCTTGATGAAGTCGACCTTGTTGCACTCTCAGTGGGGCATACAATCGGAGTGGCACGTTGTGTCACGTTCAAACAGAGGCTATACAACCAAAACGGCAACAATCAACCCGACGAAAAGCTAGAGAGATCTTACTACTTCGGGCTGTTGAACTCCGATGAAGTGCTTTGGACTGGGAATGTCAAGACGACGATGGATTTGGTTAAGGTATATGTAGAAGATGAGGGTCTGTTCTTTGACCAGTTTGCTAAGTCGATGGTGAAGATGGGAAATATTAGTCCTCTTTTGAGTGAAGTTAGGAAGTCTTGTCGCCGGGTTAACTCGGCGAATTAA 900 46.22 MAFLELSVSLMPFILSTLTFSSHAHPGFNFGWGVGIGSGGGGGSGDSYNNNSYFGLFPDFYQFSCPYANDIVMSVLENAISKQPRIAASLLCPHFHDCFAQGCNASVLLDSSAQFVSGKECSSKHKLHKRIRNILAVAARASTILSGGPSWELPIGRRDSKTANINLSNTNIPPPNSTIQYLLTFFQSQGLDEVDLVALSVGHTIGVARCVTFKQRLYNQNGNNQPDEKLERSYYFGLLNSDEVLWTGNVKTTMDLVKVYVEDEGLFFDQFAKSMVKMGNISPLLSEVRKSCRRVNSAN 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11981829 11983061 - Conep07aG0190400.1 Cone7ag1849 442445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1849 299 SUPERFAMILY Heme-dependent peroxidases 56 296 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone7ag1849 299 Gene3D - 133 172 - -
Cone7ag1849 299 Gene3D - 279 296 - -
Cone7ag1849 299 Gene3D - 56 131 - -
Cone7ag1849 299 Gene3D Peroxidase, domain 2 237 278 - -
Cone7ag1849 299 Gene3D Peroxidase, domain 2 173 234 - -
Cone7ag1849 299 PRINTS Plant peroxidase signature 65 84 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone7ag1849 299 PRINTS Plant peroxidase signature 89 109 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone7ag1849 299 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone7ag1849 299 PRINTS Haem peroxidase superfamily signature 87 101 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone7ag1849 299 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone7ag1849 299 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone7ag1849 299 Pfam Peroxidase 73 235 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone7ag1849 299 PANTHER PEROXIDASE 72-RELATED 22 122 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone7ag1849 299 ProSiteProfiles Plant heme peroxidase family profile. 55 296 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag1849 Cone-Chr7:11981829 Cone1ag0415 Cone-Chr1:3631426 9.63E-51 dispersed
Cone4ag1937 Cone-Chr4:13681554 Cone7ag1849 Cone-Chr7:11981829 2.74E-146 wgd
Cone6ag1651 Cone-Chr6:12612075 Cone7ag1849 Cone-Chr7:11981829 2.41E-79 wgd
Cone7ag1849 Cone-Chr7:11981829 Cone9ag1575 Cone-Chr9:11337036 4.81E-54 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1849 K00430 - gmx:100795020 318.931