Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1859 ATGGCGGAAACAGGGTCGGGGCCGGGAGGGAGAATGTGGTGCTCGGTGCCAGAGAAGATGCAGCTTCATGGAGCCATGTTGGCCCTGCAGTTTGGCTATGCTGGCTTCCACGTTGTTTCCAGATTTGCCCTCAACATGGGCATTAGTAAACTTGTCTTCCCTGTTTATAGGAACATTATTGCCTTGATCCTGCTCCTTCCCTTTGCATATTTCCTCGAGAAGAAGGAGAGGCCTGCCATTACACTGAACTTTCTCCTTCAGTTCTTCCTCCTTGCTCTCATTGGAATAACGGCAAACCAAGGATTTTACTTGCTGGGATTGGACAACACGTCACCCACCTTTGCCTCAGCAATACAAAACTCTGTTCCGGCCATTACTTTCCTCATGGCCGCCTTACTCCGGATAGAACATGTCCGAATTAACAGAAAAGACGGAATAGCAAAAGTGGTAGGAACAATTTGCTGTGTCGCAGGAGCCACAGTGATCACACTCTACAAGGGACCCACCATATACAGCCCAACTCCGTCTCTACAAATCACCGTCGCCGGCACCACACCGGCTGCCCCGTACACGTACTTGGGCGATGCAAAGGGAAAAAGTTGGACTCTGGGTTGCGTGTATCTAATCGGTCATTGCTTGTCCTGGTCCGGTTGGCTAGTCTTACAAGCTCCGGTTCTGAAAAAGTATCCGGCCCGGCTCTCCGTCACTTCCTACACGTGTTTCTTTGGGATTCTTCAGTTTCTGATAATCGCTGCGTTTGCCGAGAGAGACCCTCAAGCTTGGCTTTTTCACTCTGGTGGTGAAATCTTCAGCGTCCTATACGCTGGTGTGGTGGCGTCTGGAATAGCGTTTGCAGTTCAGATATGGTGCATCGACAGAGGGGGCCCTGTTTTTGTGGCGGTTTATCAGCCTGTTCAGACTCTTGTCGTCGCTATAATGGCTTCTATTGCTTTAAGCGAGGAGTTCTACTTGGGAGGGATAATCGGGGCGGTGCTGATCATAGCAGGATTGTACTTTGTGCTCTGGGGAAAGAGTGAAGAAAGGAAGCTGAACTCTCAGGAGAAGGCAGCGATTCAGTACGCCACGGAGCATGATAACAGAACAACCAGCCACGTTGCGCACGCCAAGTCCTCCATTACTGAACCACTTCTCCCTTCGTCAACTGAAAACGTTTGA 1176 50.34 MAETGSGPGGRMWCSVPEKMQLHGAMLALQFGYAGFHVVSRFALNMGISKLVFPVYRNIIALILLLPFAYFLEKKERPAITLNFLLQFFLLALIGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAALLRIEHVRINRKDGIAKVVGTICCVAGATVITLYKGPTIYSPTPSLQITVAGTTPAAPYTYLGDAKGKSWTLGCVYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGILQFLIIAAFAERDPQAWLFHSGGEIFSVLYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASIALSEEFYLGGIIGAVLIIAGLYFVLWGKSEERKLNSQEKAAIQYATEHDNRTTSHVAHAKSSITEPLLPSSTENV 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12018231 12020173 - Conep07aG0191400.1 Cone7ag1859 442455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1859 391 Pfam EamA-like transporter family 29 163 IPR000620 GO:0016020(InterPro)
Cone7ag1859 391 Pfam EamA-like transporter family 203 341 IPR000620 GO:0016020(InterPro)
Cone7ag1859 391 PANTHER WAT1-RELATED PROTEIN 25 354 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cone7ag1859 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 346 - -
Cone7ag1859 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0305 Cone-Chr6:1399504 Cone7ag1859 Cone-Chr7:12018231 5.83E-71 dispersed
Cone7ag1542 Cone-Chr7:10639328 Cone7ag1859 Cone-Chr7:12018231 5.68E-67 dispersed
Cone7ag1859 Cone-Chr7:12018231 Cone9ag0339 Cone-Chr9:1479254 4.67E-73 dispersed
Cone17ag1370 Cone-Chr17:9540516 Cone7ag1859 Cone-Chr7:12018231 7.20E-49 wgd
Cone20ag0110 Cone-Chr20:496952 Cone7ag1859 Cone-Chr7:12018231 1.34E-193 wgd
Cone4ag1945 Cone-Chr4:13711758 Cone7ag1859 Cone-Chr7:12018231 3.17E-260 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1859 - - - 0.0