Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1863 ATGGAGATAGAACAGAAGAAGATTACGTCCAAGAAACGAACGAAGCCAAGCGAGGTTGGTTTTGATTCTGATGACAACGAGCCCATTGGATCTCTGTTGAAGCTGAAGAAGCCACGAATCCCTAAGAAGACTAATTTGGGTGCAGAAGCAGAAGATAGTCGTGAAAGGGGAAAAAAGGTTGGGGCATCAAAATTGGCCCAAAAAGATGACGATTTTGGAGGAATGGAAGATACCTTGGCTAATTTTAAGAAGAAGTTGAAGGGTCCGAAAAAGAATAAGGGATCAAAAATTGTGAGGCAATCGGCTTCTGCTTCGCTTCTGGTCGAGTCTTCAGATCCGTCCTCAATTGGACCTGTAAAGATTGGAGTTTTAGATGGAAGATCGACATCCAATATTGTGAGGAATGACCAGGTGCTAGGCCATGACAGATCCGACATATCTTTGGGCATAAGATTAGAAAACAAACTTAAATCAAAAGCAAGGAGACTCAAGAATAGTTTGACTTCTAAGGAGATTGACGCTCCCGTTCCTCTCAACGATGGTGCAGGTATGTGTCTTGGGGAGGGTTCTAATCTTTCTTTGAATGTACACTTGTCAGCAGTTTTCAGAAAAGATGAATCTGGTTTAAATAGGAAATCATGCAAGTTGGCAAGTTCGAAACCGAAAAGTAAGCGAGAGAATTTGGAGAATACATCAAGCCCCATATCTGAAGCTATTACAAGGGTGTGTAAGTCTGATACCCTGCCTCTTGGTGGTTTATGTCTATTAGGTTCAGCCATAGATGAATGTAGGAGAGTGGAAATCCATAGGTTAAATGACAGTTTTCATCAAGCCTCCGGCTGCATTGAGGGGAAAGGTAACACCACTTGTGGGATTTCGAGTGATCCAGATGATCCATACAGTTCCAATGAACTCCACAATGAAGAAAGCAAGCGGCTTAGTTGTTTACAGTTGAGACAGAGCTGTTCTTCTCTAAAAGAAAGAAGTCAATTCCGAAGTCGAAGTATGAAAGATGGATTAAAGCATTGTTCTACAAGTGACACTTCCACTAATGGTTTGTCTGATGCATTATCCCAGGAGTCGAAGGATGCTTTGTATCCGGATTGCGATGTTGAATTGCCTAAAATATCACTTAAAAGTATGTCCAAAGTGAAATGGGAAACTACCTCTGAGGTGGTCCGGGTCGAAGAATTCCGTGATGATTGTGATGGTTTGGATCCTCACATTAATAACCCTGAAATCGCTGTAGGTTCTTTGCACAATGATTATGCCTCTGGAAATTCTTCTGATTTGAATAATCAAGGACATCCAAACAAACCTCCAGATGGTGCTTTTGAAGGCAGTAGTGCTCCAAATCACGATTCTAAATTTGTTGGCAAATTTGCGAATGGTAACTCTCCTGAATTTATAGCTCCAGATGAAAATGAAAGTTACTTGGAGGATGCAGTGTCTGTTCCTGACTACGAAAAAGTTAGTATGCTGTCAGCTGTCCAGCGTGCTGTGCGCAAGGCTAAGAAACCCAGGCATCTTGATATGGCCTATGAGGGGGATATTGATTGGAAGATTTTGACGGAGGAGCCAGGTTTTCTTGAGGGTCAACGCACTGTAAATAGTGATCGTTCTTATAAATCCAGAAGAGATTCAAATATTGATACAGAATCTGAAAGTGGTGGGATGGCGGCAGTGTCAGCTGGACTCAAAGCTCATGCAATTGGTCTGCTTGAGAAAATTAAATTCAAGGAGGTCTTAAAGTGCAAAGGCGGGCTTCAAGAGTATTTAGAATGCAGGAATCAGATCTTAGATCTCTGGTGGAAAGATGTTTCTCGGGTTTTGCTTCTCAGTGACTGTGGGGTCACTGAAACTCCCTCAGAGGATGAGCCAGCATGTGATTCCCTTATAAGGGAGATCTATGCATTTCTTGATCGCAGTGGTTATATCAACGTCGGAATTGCATCAGAGAAGGACAAATCGGAACCAAGTGCTGTGCATAATTATAGTCTTCTTGAAGAGAAAAAAGTTGAACATGACTCTGGGGCTTCAGTTGCTGACTCTGAGGATGGTGTTTCCTTCATTGTTGGTCATGTTGAACGTTCAGAAGCTTCGATGGAGGCAAAAAGTGCTATTATACTATCTGGAGAGGAGAACCTGACAATGATAGCCACCAAAGAAAGTAACCTTACTGCAATTAGTTTGGATCCTCCAAATGTCAGCAAGACTAAAGAAGGCATAGCTGATGAAGACCTGCAAAACAGTAGCGCTGATAATGAAGTACCAGATATATTGGTCAATTTGGATGTTGCTGATCCAAGTTGTGAAAATTTGGATACCAAAACTGCCCCTGACCTCTCTTCTGTCCCCACAAATGGGCATGAGGGAGTGAATTGTCAATATCAATGTGATTCAGAAGTGGGAAAGAGAATTATCGTTGTAGGAGCTGGTCCTGCCGGTCTAACTGCTGCACGCCACTTACAGCGCCAGGGTCTTACTGTCACTGTGCTTGAAGCTAGGAGCAGGATAGGAGGTCGAGTTCATACCGATCACACATCACTCTCAGTTCCTGTTGATCTTGGTGCAAGTATTATTACAGGCGTTGAGGCCGATGTTACCACTGAAAGGAGACCTGATCCATCCTCCTTGATTTGTGATCAGCTAGGTCTTGAGTTAACCGTGTTAAACAGTGACTGCCCCCTGTATGATATTGTAACATGTGGAAAAGTTCCTGCTGATCTGGATGAAGCCTTGGAAGCAGAATTCAATGGCCTTCTTGATGATATGCTATTGCTAGTTGCACAATGGGGGGAGCATGCTTTGACTATATCCCTTGAAGAGGGATTAGAATATGCCCTTAAGCACCGTCGAAGGGCACGATTGGGAATTAATATTGAAAAAATAGAGCCGCACAATTCTGCTAATGCTTTATCTAACTGCAAAAGTAAACTTGATAGCAGTGATGTTGAGAAAGAGAGTTCCAGGGAGGGGATTTTGAGTCCTCTTGAGAGGAGGGTTATGGATTGGCATTTTGCCAACTTGGAGTATGGTTGTGCTGCTTTGCTTAAAAAGGTATCGCTTCCATACTGGAACCAAGATGATGTTTATGGAGGCTTTGGAGGAGCTCATTGTATGCTTAAAGGTGGTTATAGCAGTGTTGTGGAGTCTCTTAGGGAAGGACTTCAGGTCTATTTGAACCATGTAGTAACTGATATTTCCTATGGCACCAAGGTCTTAGAAAACCAATCCAAGAAGGTAAGAGTCTCCACCTCAAATGGTAGTGAATTTCTTGGAGATGCTGTGCTGATCACGGTACCTCTTGGGTGCTTGAAAGCAGAAACTATCAAATTTTCCCCCGAGTTACCTCAATGGAAGCAATCTTCTATTAAACGGCTTGGGTTTGGAGTTCTCAACAAAGTTGTTTTGGAATTTCCTGAAGTTTTCTGGGATGACTCTGTTGATTACTTTGGAGCAACTGCAGAGGAGACAAATTGGCGAGGCCAGTGCTTTATGTTCTGGAATGTTAGGAAAACGGTTGGGGCACCTGTTCTAATTGCATTAATTGTTGGTAAGGCAGCTATAGACAGGCAAGATTTACAAGCTTTTGATCATGTAAGCCATGCTTTAACGATCCTTCGTAAACTTTTTGGAGAAGCTTCAGTACCTTATCCAATTGCATCTGTAGTAACAGATTGGGGCAGGGATCCTTTTAGCTATGGTGCTTACTCCTACGTCGCTGTTGGATCATCTGGAGAAGATTATGATATCATAGGCAGGCCTGTTGAGAATTGTCTGTTCTTTGCTGGGGAGGCTACCTGCAAGGAGCATCCTGACACTGTTGGGGGTGCGATGATGAGCGGGCTTAGGGAGGCCGTACGGATGATTGATATTTTGAGTACTGGATATGATTATATTGCAGAAGTAGAGGCAATGGAGGCTGCTCAGAGACAGTCGGAGTGTGAAAAGGATGAAGATTGGGAGATAGTGAAGAGACTCAAAGCCTTGGAGCTTTCTAGCGTCCACTATAACTCTTTTGATAGAGGGTCCTTACTACAAGACATGTTCTTTAGTGCAAAAACCACTACAGGACGGTTACACCTGGCAAAGGATTTGTTGAATCTCCCTACTGAAACCTTGAAGTCCTTCGCAGGGACTAAAGAAGGGCTTACTGTGCTCAATTCATGGATACTGGACTCAATGGGAAAGGATGGGACACAACTTTTGCGGCACTGCGTTCGCCTTCTCGTGCTTGTTTCCACTGATTTACTTGCTGTGCGGTTATCAGGCATAGGGAAAACTGTCAAAGAAAAGGTTTGTGTACATACAAGCCGAGATATACGAGCCATAGCAAGTCAGTTGGTTAGTGTTTGGCTCGAAGTATTCCGTAAAGAAAAAGCTTCAAATGGCGCAACAAAAATTCCAAGGTCAGCAACTGCTCTTGAATCATCTAAAAGAAGATCTCTCAAAGATTCTTCCTTTGGGAAGCCCCCTTTGCATGCAAACCATGGTGCTTCAGAAAGTACAAGTGCAGATTTGAAGAAAGTTGATAGCAAATCATATAAACTTGACATGGCTGATGCATCGAAACAAGAGATCAGTTCGTCAAGGTTCAGAGGCTCATCTGGTAGGTTGCATCCAGAAGTGGAAGGTGAGAATGTGGCCATGTCCAAAGAAGAACGGGCTGCCTTCACTGCTGCTGAAGCAGCCCGTGCTGCTGCCCTTGCAGCTGCAGAGGCATATGCATCTTCAGAAGCCAAGTGCAACACCTTGCTGCAGCTGCCGAAGATACCATCTTTCCATAAATTTGCCAAAAGAGAGCATTTTGCTCAGATGGATGAGTTTGACCACCGGAAGAAGTGGTCTGGTGGTTTTTTGGGAGGACAAGATTGTATATCGGAAATAGACTCAAGGAACTGTAGAGTTAGGAATTGGTCTGTTGATTTTTCCGCTGCTTGTGTTAATCTTGACAGTTCAAGAGCATCCGTGGATAACCTCTCGCAACGAAGCCATTCTAATGAAATAGCCAACCAGTTAAACTTAAGGGAGCACTCAGGAGAAAGTGTGGCTGTAGACAGCAATTTTTATACAAAAGCATGGGTTGATTCAGCTGGTAGTGGGGGGGGACTAAAGGACTATCATGCTATAGAGAGATGGCAATCTCAAGCAGCTGCTGCTGATAGTAATTTCTCCAGTCCAACTATGCATGTACGGGATGAGGAGGAATCAAACACAACTTCAAAACAAACTTCTTGGAAGTATGATGGACTAGCGAATGAGAGCTCAGTTTCACAAGTTACAATGAACAAGGAGTCGGTAAAAGATCATTCTCGAGGAGCAGACAGAATTAAACAGGCTGTTGTAGATTATGTCGCATCATTGCTTATGCCTCTTTATAAGGCAAGGAAAATTGACAAGGAGGGATACAAGTCAATAATGAAGAAAAGCGCAACCAAGGTTATGGAACAGGCAACAGATGCAGAGAAAGCCATGGCTGTTTCTCAGTTTATTGATTATAAGCGCAAGAACAAGATTCGTTCCTTTGTGGATAAATTAATAGAGAGGCACATGGCACTGAAGCCAGTAATTAAAAAATAA 5583 43.13 MEIEQKKITSKKRTKPSEVGFDSDDNEPIGSLLKLKKPRIPKKTNLGAEAEDSRERGKKVGASKLAQKDDDFGGMEDTLANFKKKLKGPKKNKGSKIVRQSASASLLVESSDPSSIGPVKIGVLDGRSTSNIVRNDQVLGHDRSDISLGIRLENKLKSKARRLKNSLTSKEIDAPVPLNDGAGMCLGEGSNLSLNVHLSAVFRKDESGLNRKSCKLASSKPKSKRENLENTSSPISEAITRVCKSDTLPLGGLCLLGSAIDECRRVEIHRLNDSFHQASGCIEGKGNTTCGISSDPDDPYSSNELHNEESKRLSCLQLRQSCSSLKERSQFRSRSMKDGLKHCSTSDTSTNGLSDALSQESKDALYPDCDVELPKISLKSMSKVKWETTSEVVRVEEFRDDCDGLDPHINNPEIAVGSLHNDYASGNSSDLNNQGHPNKPPDGAFEGSSAPNHDSKFVGKFANGNSPEFIAPDENESYLEDAVSVPDYEKVSMLSAVQRAVRKAKKPRHLDMAYEGDIDWKILTEEPGFLEGQRTVNSDRSYKSRRDSNIDTESESGGMAAVSAGLKAHAIGLLEKIKFKEVLKCKGGLQEYLECRNQILDLWWKDVSRVLLLSDCGVTETPSEDEPACDSLIREIYAFLDRSGYINVGIASEKDKSEPSAVHNYSLLEEKKVEHDSGASVADSEDGVSFIVGHVERSEASMEAKSAIILSGEENLTMIATKESNLTAISLDPPNVSKTKEGIADEDLQNSSADNEVPDILVNLDVADPSCENLDTKTAPDLSSVPTNGHEGVNCQYQCDSEVGKRIIVVGAGPAGLTAARHLQRQGLTVTVLEARSRIGGRVHTDHTSLSVPVDLGASIITGVEADVTTERRPDPSSLICDQLGLELTVLNSDCPLYDIVTCGKVPADLDEALEAEFNGLLDDMLLLVAQWGEHALTISLEEGLEYALKHRRRARLGINIEKIEPHNSANALSNCKSKLDSSDVEKESSREGILSPLERRVMDWHFANLEYGCAALLKKVSLPYWNQDDVYGGFGGAHCMLKGGYSSVVESLREGLQVYLNHVVTDISYGTKVLENQSKKVRVSTSNGSEFLGDAVLITVPLGCLKAETIKFSPELPQWKQSSIKRLGFGVLNKVVLEFPEVFWDDSVDYFGATAEETNWRGQCFMFWNVRKTVGAPVLIALIVGKAAIDRQDLQAFDHVSHALTILRKLFGEASVPYPIASVVTDWGRDPFSYGAYSYVAVGSSGEDYDIIGRPVENCLFFAGEATCKEHPDTVGGAMMSGLREAVRMIDILSTGYDYIAEVEAMEAAQRQSECEKDEDWEIVKRLKALELSSVHYNSFDRGSLLQDMFFSAKTTTGRLHLAKDLLNLPTETLKSFAGTKEGLTVLNSWILDSMGKDGTQLLRHCVRLLVLVSTDLLAVRLSGIGKTVKEKVCVHTSRDIRAIASQLVSVWLEVFRKEKASNGATKIPRSATALESSKRRSLKDSSFGKPPLHANHGASESTSADLKKVDSKSYKLDMADASKQEISSSRFRGSSGRLHPEVEGENVAMSKEERAAFTAAEAARAAALAAAEAYASSEAKCNTLLQLPKIPSFHKFAKREHFAQMDEFDHRKKWSGGFLGGQDCISEIDSRNCRVRNWSVDFSAACVNLDSSRASVDNLSQRSHSNEIANQLNLREHSGESVAVDSNFYTKAWVDSAGSGGGLKDYHAIERWQSQAAAADSNFSSPTMHVRDEEESNTTSKQTSWKYDGLANESSVSQVTMNKESVKDHSRGADRIKQAVVDYVASLLMPLYKARKIDKEGYKSIMKKSATKVMEQATDAEKAMAVSQFIDYKRKNKIRSFVDKLIERHMALKPVIKK 1860
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12039205 12047937 - Conep07aG0191800.1 Cone7ag1863 442459

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1863 1860 MobiDBLite consensus disorder prediction 419 461 - -
Cone7ag1863 1860 MobiDBLite consensus disorder prediction 538 552 - -
Cone7ag1863 1860 SUPERFAMILY FAD/NAD(P)-binding domain 804 1293 IPR036188 -
Cone7ag1863 1860 Gene3D - 961 1246 - -
Cone7ag1863 1860 PANTHER FLAVIN MONOAMINE OXIDASE 779 1293 IPR050281 GO:0016491(PANTHER)
Cone7ag1863 1860 MobiDBLite consensus disorder prediction 1722 1747 - -
Cone7ag1863 1860 ProSiteProfiles SWIRM domain profile. 557 657 IPR007526 GO:0005515(InterPro)
Cone7ag1863 1860 MobiDBLite consensus disorder prediction 1527 1549 - -
Cone7ag1863 1860 MobiDBLite consensus disorder prediction 1 69 - -
Cone7ag1863 1860 SUPERFAMILY Homeodomain-like 559 653 IPR009057 -
Cone7ag1863 1860 MobiDBLite consensus disorder prediction 42 69 - -
Cone7ag1863 1860 Gene3D - 1030 1289 IPR036188 -
Cone7ag1863 1860 Gene3D - 557 660 IPR036388 -
Cone7ag1863 1860 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1381 1467 IPR035441 -
Cone7ag1863 1860 PRINTS Adrenodoxin reductase family signature 829 842 - -
Cone7ag1863 1860 PRINTS Adrenodoxin reductase family signature 806 828 - -
Cone7ag1863 1860 Pfam SWIRM domain 570 647 IPR007526 GO:0005515(InterPro)
Cone7ag1863 1860 MobiDBLite consensus disorder prediction 421 436 - -
Cone7ag1863 1860 Gene3D - 801 885 IPR036188 -
Cone7ag1863 1860 Pfam Flavin containing amine oxidoreductase 815 1291 IPR002937 GO:0016491(InterPro)
Cone7ag1863 1860 MobiDBLite consensus disorder prediction 1468 1508 - -
Cone7ag1863 1860 MobiDBLite consensus disorder prediction 1 22 - -
Cone7ag1863 1860 SUPERFAMILY FAD-linked reductases, C-terminal domain 1129 1240 - -
Cone7ag1863 1860 MobiDBLite consensus disorder prediction 336 356 - -
Cone7ag1863 1860 MobiDBLite consensus disorder prediction 537 556 - -
Cone7ag1863 1860 MobiDBLite consensus disorder prediction 342 356 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1863 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0972 Cone-Chr14:7940262 Cone7ag1863 Cone-Chr7:12039205 1.12E-64 dispersed
Cone7ag1863 Cone-Chr7:12039205 Cone9ag0142 Cone-Chr9:613544 2.23E-85 dispersed
Cone4ag1951 Cone-Chr4:13750268 Cone7ag1863 Cone-Chr7:12039205 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1052 Blo01g01586 . . . Bpe02g00363 . Bma04g00234 . Cmo05g00295 Cmo12g00373 . . . Car12g00399 . . Cpe07g00378 Bhi04g00235 . . . Hepe10g0131 . . . . . . . . . Cone4ag1951 Cone7ag1863 . . . . . . . . . . . . . . . . . Cma12g00423 Cma05g00288 Car05g00239 . Cpe11g00239 . . . . . . . . . . . . . . . Lsi08g01341 Csa02g02114 Chy03g01402 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004381 1 2 2 3 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 4 1 1 43
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46604 PF00067 p450 2.70E-87 No_clan Cone TR