Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1881 ATGGCTAAATCGATAACTTCCTCAGCTGGTCAACCGGCCGCCACAAGCTCGGATCGAAAGGAGAAGGAAAAACGTCATTCCAAAAGGAAATCCAACCAGCATGAGCAGCAGCAGGTCAAACCAGCTTCCTCGTGGGACCAAATCAAGAACCTGCTAACCTGCAAACAGGTTGAAGCAGGGACACATGTCCACGACCCATCAAAAAACAAACCGGCCGGTTATTCAAAGCTCGGGTCATCGTGTAGCTCTATATGCAGCTTCAAAGACGTAGTTCATGGCAACACTAGTAGGGTGGTCCATAGAGCCGACAACTCTCCTGAGGGCAGTTTAGTGGCCGGCCAAGAAGCCAGGCTACTCAATAGCAGGACTCGTCGGAAAGGAGCAAATGGTTCCTCCTCCCGGTCTGTATCCGGTTCGACAAGATCCAATAACTGCGCCGCGAGCACAGCTAATTCCTACTCTTCGTCCTCTAGGGGAATACAATTCAGGAAGCTCTCCGGCTGTTACGAGTGTCGGACAGTCGTTGACCTTAGCAGGTACCAAATTCCGAGGTCTACCATTTGTTCATGTCCTCAATGTGGAGAGATCTTCCCCAAGATTGAGAGTCTGGAACTTCACCAAGCAGTTCACCATGCCGTGTCGGAGCTGGGCCGAGAAGATTCCGGCCGGAACATCGTGGAGATTATCTTCAAATCTAGTTGGCTTAAGAAAGATAACCCGATCTGCAGCATCGAACGGATATTAAAAGTCCACAACACCCAGCGCACCATACAACGGTTCGAGGACTGCAGGGATGCAGTCAAAACCCGGGCGCTCAACAGCACCAGAAAAAATCCCAGATGCGCGGCGGACGGTAACGAACTCCTGCGATTTCACTGCACCACCGTAACGTGCGCGCTCGGCTCACGTGGCTCGTCCAGCTTATGCTGCTCAGTTCCCGGATGCGGCGTCTGCACTATCATCCGGCACGGGTTCCAAGCCAAGAGTGCTGCTGGCGGGGCCGGTGAGAACGGGAGAGCTGGTGTTCGGACAACCGCGAGTAGTGGTAAGGCACACGACTCGCTGAGATGTACGGACGGGCGTAGGGCCATGCTGGTCTGCCGTGTGATCGCAGGCAGGTTGAAACTCATTGCTGAAGACGCGCCGGCAGAGGAGGATAGCGGCTTGGGCGGCGCATATGACTCAGTGTCCGGCTCCGCGGGGATCTACTCCAATCTGGAGGAGTTGGTAGTTTTCAATCGAAGGGCTATTCTACCTTGTTTTGTAGTACTTTACAAGGCATTAGAATCATAA 1293 53.36 MAKSITSSAGQPAATSSDRKEKEKRHSKRKSNQHEQQQVKPASSWDQIKNLLTCKQVEAGTHVHDPSKNKPAGYSKLGSSCSSICSFKDVVHGNTSRVVHRADNSPEGSLVAGQEARLLNSRTRRKGANGSSSRSVSGSTRSNNCAASTANSYSSSSRGIQFRKLSGCYECRTVVDLSRYQIPRSTICSCPQCGEIFPKIESLELHQAVHHAVSELGREDSGRNIVEIIFKSSWLKKDNPICSIERILKVHNTQRTIQRFEDCRDAVKTRALNSTRKNPRCAADGNELLRFHCTTVTCALGSRGSSSLCCSVPGCGVCTIIRHGFQAKSAAGGAGENGRAGVRTTASSGKAHDSLRCTDGRRAMLVCRVIAGRLKLIAEDAPAEEDSGLGGAYDSVSGSAGIYSNLEELVVFNRRAILPCFVVLYKALES 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12127236 12129170 + Conep07aG0193600.1 Cone7ag1881 442477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1881 430 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 43 426 - -
Cone7ag1881 430 Gene3D - 212 427 - -
Cone7ag1881 430 MobiDBLite consensus disorder prediction 1 15 - -
Cone7ag1881 430 ProSiteProfiles Zinc finger C2H2 type domain profile. 188 215 IPR013087 -
Cone7ag1881 430 ProSitePatterns Zinc finger C2H2 type domain signature. 188 211 IPR013087 -
Cone7ag1881 430 SUPERFAMILY ADP-ribosylation 213 426 - -
Cone7ag1881 430 MobiDBLite consensus disorder prediction 16 35 - -
Cone7ag1881 430 MobiDBLite consensus disorder prediction 1 46 - -
Cone7ag1881 430 MobiDBLite consensus disorder prediction 99 153 - -
Cone7ag1881 430 MobiDBLite consensus disorder prediction 124 153 - -
Cone7ag1881 430 FunFam C2H2-like zinc finger protein 212 426 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0092 Cone-Chr6:446661 Cone7ag1881 Cone-Chr7:12127236 2.84E-66 dispersed
Cone7ag1552 Cone-Chr7:10684926 Cone7ag1881 Cone-Chr7:12127236 4.88E-88 dispersed
Cone7ag1881 Cone-Chr7:12127236 Cone9ag0108 Cone-Chr9:469629 1.03E-61 dispersed
Cone17ag1400 Cone-Chr17:9660835 Cone7ag1881 Cone-Chr7:12127236 1.04E-167 wgd
Cone4ag1968 Cone-Chr4:13835607 Cone7ag1881 Cone-Chr7:12127236 2.19E-275 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46607 PF02536 mTERF 1.10E-107 No_clan Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1881 - - - 0.0