Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1915 ATGGCCATGGAGGACACGGAGAGTTGTAGTAGTACAGCGGTGGCTTTTTTGCACCGTCAGAGTCGGACACAGAGGCAGAAGGCCCATATTTATGATCAAGTTCTTCGTCGACTCAGGGACTTGAATGACGCAGAGGCCACACTGCCTAGATTCGAAGATGAGCTCTGGGCCCATTTCTATCGCCTACCGACTAGGTATGCAGTGGATGTGAACATGGAGAGGGCACAATATGTTCTTATGCACAAACGATTGTTGCTCATGGCACGCGATCCTGCTACTAGACCTGCAATTGATGTCCGTCTTATGCAGGTTTCCTCTACTTCTTGTGGAAACTCCTTTGAGTCTATCCATTCGAGCTCACTAAGAAAAGTGGATTCTCAATGTTCTGACTATGGCGGAAAATCGAGTAATATTCACAGCCATCATCCTCCACCTGCCTTTGGTTCATCGGAAGACACTAGTTTACATGCTCAAGATCAAGATAGCTCCTTTTGCGGGCCAATGCATGAGATAACAATATCAACAATTGACAAACCAAAGCTCCTCAGTCAGTTAACATTCTTACTTTCTGAGATTGGACTCAACATTCAAGAAGCACATGCTTTTTCCACCGTTGATGGCTATTCGCTGGATGTTTTTGTAGTTGATGGTTGGGCAATTGAGGAGACTACGAAGCTAAGAGATGTACTGGTAAAAGAGATATTAGAGATTGAGACACATGCTTCACTGAAATATCGTGCTTCTACCTCTCATGTTGGGCAAAGAAATGAAAATGACATCAATTTCATCTCTAATCATGCAAACATTCCCACTCATGTAGTTGATCACTGGGAAATTGATGCAAGCTTGTTGAAAATTGGAAAGAAAATTGCATCTGGATCTTTCAGTGACTTGTATAAAGGTACCTTATTGGGTCAAGATGTGGCTATTAAAATTCTCAGGGCCGAGCACCTGAACAAGGACGTGCAGAGAGAATTTGCTCAAGAAGTCTATATTATGAGGAAAATTCGACACAAAAATGTTGTTCAATTCATCGGGGTTTGTTCACAACCTCCAAATCTGTGCATCGTCACAGAATATATGTCTGGTGGAAGCATACATGACTTTCTGCATAAACAAAAGGGTGTTCTAATACTTCAATCCTTAGTAAGAGTTGCACTTGATGTTTCCAAGGGAATGAACTACTTGCACCAAAATAATATAATCCATAGGGACCTCAAAGCTGCCAATCTTTTGATGGATGCAGATGGAGTCGTTAAGGTTGCTGATTTTGGTGTTGCCAGAATTCAAGTTCAATCTGGTGTAATGACTGCAGAAACTGGAACCTACCGGTGGATGGCTCCAGAGGTTATCGAGCATAAACCGTATGATCAAAGAGCTGATGTCTTTAGTTTCGGGATTGTTCTGTGGGAGCTGCTTACTAGCAAGCTTCCATATGAGTATTTGACTCCATTACAAGCAGCAGTCGGCGTGGTCCGGAAGGGTTTGAGGCCTACGATACCGGAACACGCTCATCCAATGTTGGTGGAGATAATCGAGAAATGCTGGCAGCAAGACTCGTCTTTGAGACCCGACTTCTCTGACACTATAGAGCTTCTACACCAGTTGTCTGATATGATTAAGGGACGGCCGGTAAAAGTCATTGGAAAACAGCAGGCAGGAGATATCTTATCTGGAATTGAAGATAGAAGAATGGAAGGGAGTAGTGGAGTGGAAGAAAAAGGGGGGGATTATAACAGCACCATCGCCAAGAAAGCACGCCTGAATTCCACGCTCGCGGCTCTACTTGAAGATCCAATACTCTCTGACATGCCCAAGAATCCGACATTATCGGACGTCGATCTCTTCATCAGTCTCGAGTTGGGCAGCGCCATGCGAGTCTCCGTCCGTAAACTCGACGGCACCACCCTCGATGTCGCCGTGATGAATTCTGCCACACTGAAGGATCTGAAGCTCGCGATCAAGAAGAAAGTCAACGATACGGAACAGTCCATGATGGGCCACCGCCACATTTCCTGGTAA 2022 44.71 MAMEDTESCSSTAVAFLHRQSRTQRQKAHIYDQVLRRLRDLNDAEATLPRFEDELWAHFYRLPTRYAVDVNMERAQYVLMHKRLLLMARDPATRPAIDVRLMQVSSTSCGNSFESIHSSSLRKVDSQCSDYGGKSSNIHSHHPPPAFGSSEDTSLHAQDQDSSFCGPMHEITISTIDKPKLLSQLTFLLSEIGLNIQEAHAFSTVDGYSLDVFVVDGWAIEETTKLRDVLVKEILEIETHASLKYRASTSHVGQRNENDINFISNHANIPTHVVDHWEIDASLLKIGKKIASGSFSDLYKGTLLGQDVAIKILRAEHLNKDVQREFAQEVYIMRKIRHKNVVQFIGVCSQPPNLCIVTEYMSGGSIHDFLHKQKGVLILQSLVRVALDVSKGMNYLHQNNIIHRDLKAANLLMDADGVVKVADFGVARIQVQSGVMTAETGTYRWMAPEVIEHKPYDQRADVFSFGIVLWELLTSKLPYEYLTPLQAAVGVVRKGLRPTIPEHAHPMLVEIIEKCWQQDSSLRPDFSDTIELLHQLSDMIKGRPVKVIGKQQAGDILSGIEDRRMEGSSGVEEKGGDYNSTIAKKARLNSTLAALLEDPILSDMPKNPTLSDVDLFISLELGSAMRVSVRKLDGTTLDVAVMNSATLKDLKLAIKKKVNDTEQSMMGHRHISW 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12257561 12263603 + Conep07aG0197200.1 Cone7ag1915 442511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1915 673 PRINTS Tyrosine kinase catalytic domain signature 441 451 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag1915 673 PRINTS Tyrosine kinase catalytic domain signature 358 371 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag1915 673 PRINTS Tyrosine kinase catalytic domain signature 504 526 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag1915 673 PRINTS Tyrosine kinase catalytic domain signature 395 413 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag1915 673 PRINTS Tyrosine kinase catalytic domain signature 460 482 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag1915 673 PANTHER SERINE-THREONINE PROTEIN KINASE 113 534 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cone7ag1915 673 ProSiteProfiles ACT domain profile. 170 250 IPR002912 -
Cone7ag1915 673 MobiDBLite consensus disorder prediction 132 161 - -
Cone7ag1915 673 CDD STKc_MAP3K-like 290 533 - -
Cone7ag1915 673 SUPERFAMILY Protein kinase-like (PK-like) 259 532 IPR011009 -
Cone7ag1915 673 Pfam Ubiquitin-like domain 625 673 IPR040610 -
Cone7ag1915 673 Pfam Protein tyrosine and serine/threonine kinase 284 531 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag1915 673 SUPERFAMILY Ubiquitin-like 620 673 IPR029071 -
Cone7ag1915 673 Gene3D Transferase(Phosphotransferase) domain 1 363 567 - -
Cone7ag1915 673 Gene3D - 619 673 - -
Cone7ag1915 673 ProSiteProfiles Protein kinase domain profile. 284 537 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1915 673 SMART serkin_6 284 537 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1915 673 SUPERFAMILY ACT-like 166 236 IPR045865 -
Cone7ag1915 673 FunFam Serine/threonine-protein kinase isoform 1 274 362 - -
Cone7ag1915 673 Gene3D Phosphorylase Kinase; domain 1 272 362 - -
Cone7ag1915 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 401 413 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag1010 Cone-Chr6:5633418 Cone7ag1915 Cone-Chr7:12257561 5.62E-69 dispersed
Cone7ag0269 Cone-Chr7:1118657 Cone7ag1915 Cone-Chr7:12257561 1.24E-60 dispersed
Cone7ag1915 Cone-Chr7:12257561 Cone9ag1008 Cone-Chr9:5263645 4.59E-72 dispersed
Cone9ag1532 Cone-Chr9:11167813 Cone7ag1915 Cone-Chr7:12257561 1.93E-19 dispersed
Cone12ag1251 Cone-Chr12:9642935 Cone7ag1915 Cone-Chr7:12257561 8.09E-226 wgd
Cone12ag0844 Cone-Chr12:7624899 Cone7ag1915 Cone-Chr7:12257561 5.13E-231 wgd
Cone7ag1915 Cone-Chr7:12257561 Cone8ag0877 Cone-Chr8:8624044 3.96E-232 wgd
Cone7ag1915 Cone-Chr7:12257561 Cone8ag1306 Cone-Chr8:10645628 1.28E-102 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83078 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1915 - - - 0.0