Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1922 ATGTCGCTCGGCGCCATCATCACCACCACCAACCCTTTAAACACATCTCGAGAAATCGCTAAGCAAGTAACTGATTCCAAGCCCGTACTCGCTTTCACGACTCAGCAACTCGTCCCTAAACTTGGCAGTTTGACTCTTCCCATCGTCCTCATCGACGACGATACTACTTCTGTTGCAGCTAATAATTCATCCATAGCTAAAATCTTGTCAACGTTAGGGGAGATGATGAGGAAAGAGACGAGTGGAAGCCGAGTTAGGGAACGAGTGAACCAGGATGACACGGCCACTTTGCTCTATTCATCGGGTACAACCGGCGCTAGTAAAGGTGTGGTGTCAACGCACAGGAACCTCATAGCGATGGTCCAAACCATTCTGGGCCGGTTCAAATTTGACGAGGGAGAGCAAACCTTCATCTTCACGGTTCCTATGTTCCACATCTACGGCCCAGCCGCCTTTTCCACCGGTCTTCTCGCGTCTGGATCGACGATCGTGGTTTTGTCAAAGTTCGAGATCCATGAGATGCTGCTGGCGATCGAGAAGTACAGAGCAACTTACCTGCCGCTAGTGCCACCGATCCTTGTGGCGCTTGTGAACAACGTGGATCAGTTAAAGTCCAAGTACGATCTGAGTTCGCTACATTCGGTTCTGTCAGGAGGGGCCCCGCTTGGAAAGGAGATGATAGAGGGGTTCCATGCCAAGTATTCGGGGGTGAAGATTCTTCAAGGTTACGGATTGACTGAATCGACGGCTGTAGGAGCGTCCACGGACACGCTAGAGGAGAGTAGGAGGTACGGAACGGCGGGGATGTTGTCGCCGACGATGGAAACCAAGATTGTGAACCCCGAGAGCGGTGAGGCTTTGGGGGTTAATCGAACGGGTGAGCTTTGGCTCAGAGGTCCCACCATAATGAAAGGTAATGTAGCACGTGATTTGGATGTCTTAGGTTATTTCGGTAACGTAGAGGCGACAACCTCTACACTTGATAAAGAGGGATGGCTAAGGACAGGTGGCTCCTTACAAGAGAATCCGGAAGGTGGCTTTTGTTGCTTCAATTCCCAAGAATCCTATTAA 1071 50.61 MSLGAIITTTNPLNTSREIAKQVTDSKPVLAFTTQQLVPKLGSLTLPIVLIDDDTTSVAANNSSIAKILSTLGEMMRKETSGSRVRERVNQDDTATLLYSSGTTGASKGVVSTHRNLIAMVQTILGRFKFDEGEQTFIFTVPMFHIYGPAAFSTGLLASGSTIVVLSKFEIHEMLLAIEKYRATYLPLVPPILVALVNNVDQLKSKYDLSSLHSVLSGGAPLGKEMIEGFHAKYSGVKILQGYGLTESTAVGASTDTLEESRRYGTAGMLSPTMETKIVNPESGEALGVNRTGELWLRGPTIMKGNVARDLDVLGYFGNVEATTSTLDKEGWLRTGGSLQENPEGGFCCFNSQESY 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12291893 12293924 - Conep07aG0198000.1 Cone7ag1922 442518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1922 356 Gene3D - 2 113 - -
Cone7ag1922 356 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 336 - GO:0005777(PANTHER)|GO:0016405(PANTHER)
Cone7ag1922 356 Gene3D - 114 260 - -
Cone7ag1922 356 Gene3D Luciferase; Domain 3 261 336 - -
Cone7ag1922 356 ProSitePatterns Putative AMP-binding domain signature. 97 108 IPR020845 -
Cone7ag1922 356 Pfam AMP-binding enzyme 2 305 IPR000873 -
Cone7ag1922 356 SUPERFAMILY Acetyl-CoA synthetase-like 2 346 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag1922 Cone-Chr7:12291893 Cone8ag0512 Cone-Chr8:3651093 3.66E-68 dispersed
Cone4ag2006 Cone-Chr4:13992231 Cone7ag1922 Cone-Chr7:12291893 5.05E-195 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1922 K10526 - cit:102606631 477.248