Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1934 ATGGCTCGGTCTGACGAAAACAACCAGGGTGTGATTGGACCCGCAAACCTTCAAGGGGGCTTACGCGCTGGAGGGGACAAATTTGTTGCGGGGATCTGCCAAAATCGCCGAGCACTTAGCACCATCAATAGCAACATAACTGGAACTCATCCTTATCCTCGTGCTGTCCAAAAGAGAGGCTTGTCAGAAAAACATGCTTTCTGCAAAAATGATCCCCCCATTCCCGTTCATCGCCCAATTACTAGGAAGTTTGCCGCCCAGATGGCTACTAAGCCGCAACTATCACCCGAGGAAACTAAGAAACCAATCCAGTTGGTGCCTACTCCAAATGTAGCTGAAGATTGCACCATTATAGATGTCGAAGACGAAAGTACAAGTAGCGATGTGCCAATGTTTGTGCAACACACAGAAGCAATGTTGGATGAGATAGATAGGATGGAAGAGGTAGAAATGGAAGACATAGCTGAGGAGCCCGTTGTGGACATAGACATGGGTGATAAAAGTAATCCACTTGCAGTTGTTGAGTACATTGATAACATATACGCCTACTACAGAAAGGCAGAGACTGCCAGTTGTGTCCCACCAAACTATATGACTCAGCAACTGGATATTAACGAAAGAATGAGAGGCATTCTCATTGATTGGCTAATTGAGGTGCATTACAAGTTTGAACTGATGGAAGAGACATTGTACCTCACTGTTAACTTGATCGATAGATTCTTAGCCATTCATCCTGTTGTGAGGAAGAAGCTCCAGCTGGTAGGGGTCACGGCAATGCTTATTGCCTGCAAATATGAAGAAGTTTCTGTTCCCGTTGTCGATGATTTTATTGTGATTTCTGACAAGGCTTACACCCGACAACAAGTGCTTGAGATGGAAAAGTTGATGGTAAATAGCTTACAGTTCAATCTATCATTTCCGACCCCTTACGTGTTTATGAGAAGGTTTCTGAAAGCAGCTCAATCAGACAAGAAGCTTGAGTTGCTGTCGTTCTTCATGATGGAGCTGTGCTTAGTAGAATATGAAATGCTTAAGTATGCGCCGTCCCTGTTAGCTGCTGCTGCAATTTTCACGGCTCAATGTTCAATAACTGGGTATCAGCATTGGAGCAGGACCAGTGAGTGGCACACCAGCTACTCAGAAAACCAGCTTTTAGAATGCTCAAAGATGGTGGTTTGTTTGCATCAAAAGGCAGGGACGGGGAAGCTGACAGGAGTTTACAGAAAGTACTCTGCGTCCAAGTATGGCTGTGCTGCCACATCCGAGCCTGCTAACTTCCTGTTGGAGTGA 1290 45.27 MARSDENNQGVIGPANLQGGLRAGGDKFVAGICQNRRALSTINSNITGTHPYPRAVQKRGLSEKHAFCKNDPPIPVHRPITRKFAAQMATKPQLSPEETKKPIQLVPTPNVAEDCTIIDVEDESTSSDVPMFVQHTEAMLDEIDRMEEVEMEDIAEEPVVDIDMGDKSNPLAVVEYIDNIYAYYRKAETASCVPPNYMTQQLDINERMRGILIDWLIEVHYKFELMEETLYLTVNLIDRFLAIHPVVRKKLQLVGVTAMLIACKYEEVSVPVVDDFIVISDKAYTRQQVLEMEKLMVNSLQFNLSFPTPYVFMRRFLKAAQSDKKLELLSFFMMELCLVEYEMLKYAPSLLAAAAIFTAQCSITGYQHWSRTSEWHTSYSENQLLECSKMVVCLHQKAGTGKLTGVYRKYSASKYGCAATSEPANFLLE 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12340108 12342735 - Conep07aG0199200.1 Cone7ag1934 442530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1934 429 CDD CYCLIN_AtCycB-like_rpt1 156 302 - -
Cone7ag1934 429 PANTHER CYCLINS 157 411 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Cone7ag1934 429 Pfam Cyclin, N-terminal domain 180 305 IPR006671 -
Cone7ag1934 429 Gene3D - 180 420 - -
Cone7ag1934 429 SUPERFAMILY Cyclin-like 168 304 IPR036915 -
Cone7ag1934 429 ProSitePatterns Cyclins signature. 209 240 IPR048258 -
Cone7ag1934 429 PIRSF Cyclin_A_B_D_E 20 429 IPR046965 GO:0016538(InterPro)|GO:0044772(InterPro)
Cone7ag1934 429 SUPERFAMILY Cyclin-like 306 425 IPR036915 -
Cone7ag1934 429 SMART cyclin_7 311 393 IPR013763 -
Cone7ag1934 429 SMART cyclin_7 214 298 IPR013763 -
Cone7ag1934 429 SMART Cyclin_C_2 307 424 IPR004367 -
Cone7ag1934 429 CDD CYCLIN_AtCycB-like_rpt2 307 423 - -
Cone7ag1934 429 Pfam Cyclin, C-terminal domain 307 423 IPR004367 -
Cone7ag1934 429 FunFam G2/mitotic-specific cyclin-1 302 419 - -
Cone7ag1934 429 FunFam G2/mitotic-specific cyclin 193 301 - -
Cone7ag1934 429 Gene3D - 193 305 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0468 Cone-Chr10:2174874 Cone7ag1934 Cone-Chr7:12340108 6.47E-77 dispersed
Cone5ag1418 Cone-Chr5:8903977 Cone7ag1934 Cone-Chr7:12340108 2.11E-75 dispersed
Cone6ag1701 Cone-Chr6:12844184 Cone7ag1934 Cone-Chr7:12340108 1.72E-158 dispersed
Cone7ag1730 Cone-Chr7:11463130 Cone7ag1934 Cone-Chr7:12340108 5.27E-52 dispersed
Cone7ag1934 Cone-Chr7:12340108 Cone9ag1624 Cone-Chr9:11579755 1.75E-90 dispersed
Cone12ag0859 Cone-Chr12:7710310 Cone7ag1934 Cone-Chr7:12340108 1.02E-129 wgd
Cone17ag1451 Cone-Chr17:9849759 Cone7ag1934 Cone-Chr7:12340108 3.54E-181 wgd
Cone20ag0025 Cone-Chr20:155965 Cone7ag1934 Cone-Chr7:12340108 1.39E-156 wgd
Cone4ag2018 Cone-Chr4:14050059 Cone7ag1934 Cone-Chr7:12340108 3.09E-254 wgd
Cone7ag1934 Cone-Chr7:12340108 Cone8ag0889 Cone-Chr8:8686330 2.20E-148 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1934 K21777 - rcu:8273611 635.565