Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag1942 | ATGAAGCAGACAACAGACGGGAAACCTCCTCGGCACCTCTCTGTTATGCGACAAAGTGTAACCTCTGCAAACCTTCCTGGCCCTACTGGTTGGAGCTTGGATACTGGAACTGTTGAAACCAAGTCCCATGATGTCAAGACAGGATTTTCGCCTGTTTTCAGATCTGGAAGTTGTGCTGAAAGAGGACCTAAACAGTACATGGAGGATGAACACATTTGCATTGATGATCTCATTGAGCATATAGGTACAGCTGCAGGTCTCACATCACCCGGAGCTTTTTATGGGGTATTTGATGGCCACGGTGGGACAGATGCTGCGTTATTTGTCAGAAATAACATTGTTAGATTCGTAGTCGAGGACTCCTATTTTCCACTTTGCGTGAAGAAGGCGATTAAAGGTGCGTTTTTTAAAGCAGATTATGCATTTGCAGATGCTAGCTCGCTAGACATATCCTCCGGTACAACTGCCTTGACCACAATTATCTTAGGAAGGACAATGATAATTGCCAATGCAGGAGACTGTCGAGCTGTTCTGGGGAGACGGGGTAGAGCCATCGAGATGTCTAAGGATCACAAACCTGATTGCACATCTGAAAGAGTAAGGATCGAGAAACTTGGTGGCGTCATTTATGATGGCTACCTCAATGGGCAGTTGTCGGTTGCACGTGCCATAGGGGACTGGCATATGAAAGGTGCCAAGGGCACCTTATGCCCATTAAGTGCAGAGCCAGAGTTCCAGGAAATGCACTTGACTGAGGACGATGAGTTTTTAATAATGGGGTGCGATGGGCTATGGGATGTCATGAGCAGTCAATTTGCGGTTACAATGGCGAGGAGAGAACTCATTCTTCACAATGATCCCGAGCGATGCTCAAGAGAACTTGTAAGGGAGGCACTCAAGCGCAATACATGTGATAATTTAACTGTAATTGTGGTCTGTTTTTCAGCTGACCCTCCCCCTAGGATAGAGATACCTCAATGCCATGTACGGAGGAGTATATCTGCAGAGGGATTGAATTTATTGAAGGGTGTACTGGATTGCCATTCCAGGTATGATTAG | 1059 | 46.18 | MKQTTDGKPPRHLSVMRQSVTSANLPGPTGWSLDTGTVETKSHDVKTGFSPVFRSGSCAERGPKQYMEDEHICIDDLIEHIGTAAGLTSPGAFYGVFDGHGGTDAALFVRNNIVRFVVEDSYFPLCVKKAIKGAFFKADYAFADASSLDISSGTTALTTIILGRTMIIANAGDCRAVLGRRGRAIEMSKDHKPDCTSERVRIEKLGGVIYDGYLNGQLSVARAIGDWHMKGAKGTLCPLSAEPEFQEMHLTEDDEFLIMGCDGLWDVMSSQFAVTMARRELILHNDPERCSRELVREALKRNTCDNLTVIVVCFSADPPPRIEIPQCHVRRSISAEGLNLLKGVLDCHSRYD | 352 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 12392172 | 12394262 | - | Conep07aG0200000.1 | Cone7ag1942 | 442538 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag1942 | 352 | Pfam | Protein phosphatase 2C | 55 | 306 | IPR001932 | - | |
Cone7ag1942 | 352 | Gene3D | - | 34 | 317 | IPR036457 | - | |
Cone7ag1942 | 352 | ProSiteProfiles | PPM-type phosphatase domain profile. | 54 | 314 | IPR001932 | - | |
Cone7ag1942 | 352 | FunFam | Probable protein phosphatase 2C 22 | 38 | 317 | - | - | |
Cone7ag1942 | 352 | SMART | PP2C_4 | 44 | 312 | IPR001932 | - | |
Cone7ag1942 | 352 | CDD | PP2Cc | 53 | 314 | IPR001932 | - | |
Cone7ag1942 | 352 | ProSitePatterns | PPM-type phosphatase domain signature. | 93 | 101 | IPR000222 | GO:0043169(InterPro) | |
Cone7ag1942 | 352 | SUPERFAMILY | PP2C-like | 47 | 315 | IPR036457 | - | |
Cone7ag1942 | 352 | PANTHER | PROTEIN PHOSPHATASE 2C | 52 | 314 | IPR015655 | GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone12ag1295 | Cone-Chr12:9857607 | Cone7ag1942 | Cone-Chr7:12392172 | 4.28E-153 | dispersed | |
Cone17ag0390 | Cone-Chr17:1857864 | Cone7ag1942 | Cone-Chr7:12392172 | 5.52E-97 | dispersed | |
Cone17ag1044 | Cone-Chr17:7876242 | Cone7ag1942 | Cone-Chr7:12392172 | 2.10E-115 | dispersed | |
Cone4ag1741 | Cone-Chr4:12829972 | Cone7ag1942 | Cone-Chr7:12392172 | 9.06E-32 | dispersed | |
Cone7ag1661 | Cone-Chr7:11158108 | Cone7ag1942 | Cone-Chr7:12392172 | 2.10E-40 | dispersed | |
Cone7ag1942 | Cone-Chr7:12392172 | Cone9ag0849 | Cone-Chr9:4151370 | 2.66E-28 | dispersed | |
Cone4ag2029 | Cone-Chr4:14086911 | Cone7ag1942 | Cone-Chr7:12392172 | 3.01E-81 | transposed | |
Cone4ag2028 | Cone-Chr4:14086405 | Cone7ag1942 | Cone-Chr7:12392172 | 4.34E-31 | wgd | |
Cone7ag1942 | Cone-Chr7:12392172 | Cone8ag0907 | Cone-Chr8:8797371 | 8.91E-175 | wgd | |
Cone7ag1942 | Cone-Chr7:12392172 | Cone8ag1336 | Cone-Chr8:10770928 | 7.63E-156 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag1942 | K14803 | - | csv:101205355 | 581.637 |