Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1944 ATGGAAAACCCAAACAATGGAAAGCATTTGAGAATCGGTGTTCTTATTTGGATTGATGTATTCCTTGATGCTGTGGTAGGTGACATCGCCATTGTAACAAACAGGACAAAGATCGTGGATTTCACTCAGCCATATGCTGCATCTGGGCTTGTTATTGTGGCTCCATTTAAAAAGCTGAACACTGGTGCTTGGGCTTTCCTAAGTCCATACTCTCCGTTCACGTCGATTGTCACTGCTATTTTCATCATTGTTATTGGGATTGTTGTTTGGATTCTGGAGAATAGGATTAATGGAGAATTCAAGGGCAATGGCGTTATTAACTATTTTGTGGTGAGTTCTAAGTTGCAAAGAATCGACACCTTGAAATCAAATGAGGATCCGATTGGATATCAAGTGGGATCTTTTGCTGAATATTATTTGAGCGAGGAGCTCAACAGTTCCAAATCAAGACTTGTTCCTCTCGGATCACCTGAAGCTTCTGCTAGGGCCCTCGAGCTTTCCCCCAAAAAGGGAGGTGTTGCTGCAGCTGTTGATGAGCGCCTTCATGTAGAGCTTTTCCTTTCGAGGCACTGCACTTTCAGAATGATTGGTCAAGAGTTCACAAAGAGCAGTTGGGGTTTTGCATTTCGACGCGAGTCTCCCTTAGCCATTGACATGTCAACTTCCATTTTGCAGCTGTCAGAGAATGGTGATCTACAAAGGATTCAGGATAAGTGGCTGAAGCAAAGGAGTTGCATTCGGGACAGCAGGGAAATTGAATCAGACCAGCTTCATCTTGAGAGCTTTTGGGGCCTCTTTCTTATGTGGGTTAGCTTGTTTCATTGCTCTCCTCATATATTTCATTCAGATAATTCTGCAGTTAAGAAGACATACTGCTGCCTTCACTGA 888 43.24 MENPNNGKHLRIGVLIWIDVFLDAVVGDIAIVTNRTKIVDFTQPYAASGLVIVAPFKKLNTGAWAFLSPYSPFTSIVTAIFIIVIGIVVWILENRINGEFKGNGVINYFVVSSKLQRIDTLKSNEDPIGYQVGSFAEYYLSEELNSSKSRLVPLGSPEASARALELSPKKGGVAAAVDERLHVELFLSRHCTFRMIGQEFTKSSWGFAFRRESPLAIDMSTSILQLSENGDLQRIQDKWLKQRSCIRDSREIESDQLHLESFWGLFLMWVSLFHCSPHIFHSDNSAVKKTYCCLH 295
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12396614 12397883 + Conep07aG0200200.1 Cone7ag1944 442540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1944 295 SMART GluR_14 9 242 IPR001320 GO:0015276(InterPro)|GO:0016020(InterPro)
Cone7ag1944 295 Gene3D - 169 205 - -
Cone7ag1944 295 SUPERFAMILY Periplasmic binding protein-like II 23 242 - -
Cone7ag1944 295 Gene3D - 19 80 - -
Cone7ag1944 295 Gene3D - 206 239 - -
Cone7ag1944 295 Pfam Bacterial extracellular solute-binding proteins, family 3 22 241 IPR001638 -
Cone7ag1944 295 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 22 112 IPR015683 GO:0005886(PANTHER)|GO:0015276(PANTHER)|GO:0038023(PANTHER)
Cone7ag1944 295 FunFam Glutamate receptor 137 244 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag1944 Cone-Chr7:12396614 Cone8ag0908 Cone-Chr8:8803388 4.81E-87 dispersed
Cone7ag1944 Cone-Chr7:12396614 Cone12ag0877 Cone-Chr12:7816693 8.86E-89 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1944 K05387 - vvi:100258104 316.62