Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0019 ATGCCTGCTTGGTGGGGGAAAAAGTCGAGTAAGAACAAAGATCAAAGCCCACGAAGTAGCTCCAGTAGCTTATCAAAATCAACGCCCATCATCAACAAGCCTAGCGATAAGAAACCCAAGAGCTTTGACGAGGTCTCCGCCGTGATTTTCTCCAGAAACTCGCCACGGTCGAGCAAGGACTATACTTCTCCACGAGCTGGAGCCGGCGGCTCTTCTGGGTTTTCTGGTTTCGATTCAGATTCGGGCGAGAAGACGTGTCATCCTCTTCCTCGCCCGCAGTGCTTTACTATTGATCATCATGCGGTTGGTATTGGATCTGGGTCGGGTTCGGTTTCTAGTGTCAGCTCATCTGGGTCGTCCGATGATCATCTGATCTCTCAGGATCATGGCCAATTAAGTTCTCACAGGGGGCTTGGTGATTCCAAAATAGACCCGAGGTCGAGAAGCCCAGGCCCAGGGTCTAGGGGGCCCACAAGCCCGACATCACCTCTCCACCCACGGTTTTGCGGATTTAATCTAATGGAGTCTCCAGCGGGAAAGGTAGACGATGGGAAGAGTCAATGTCATAGGCTACCCCTTCCACCAGGTTCTCCTACAAGCCCTTCTTCCTTGCCCAACCCAAGAACTAATGGCGTGACAGAAAACTCAACAACTTCCACACAACCAAAATGGAAGAAAGGAAGGCTTCTTGGAAGGGGCACATTCGGGCATGTTTACCTTGGTTTTAACAGTGTTAATGGACAAATGTGTGCAATCAAAGAAGTCAGGCTCGTAAGCGATGACCAGACATCTAAAGAATGTCTCAAGCAACTGAATCAGGAGATAAATTTGCTTAGTCAGCTTTCACATCCTAACATTGTTAGATATTATGGAAGTGAGATGGTTGATGAGGCACTCTCTGTCTATTTAGAATATGTGTCAGGTGGTTCAATCCACAAATTACTTCAAGAGTACGGCCCTTTTAAAGAACCTGTTATACAGAACTACACACGACAGATTATTTCCGGGCTTGCTTATCTACATGGAAGGAATACTGTGCACAGGGATATCAAAGGAGCCAACATATTGGTAGATCCTCACGGCGAGATCAAGTTGGCAGACTTTGGGATGGCTAAACATATAACAAATTACGGTTCGATGCTTTCTTTCAAAGGAAGTCCTTATTGGATGGCACCTGAGGTCGTAATGAATACAAATGGCTATAGTCTTGCTGTTGATATATGGAGCTTGGGTTGTACAATCCTGGAAATGGCAACATCAAAACCACCTTGGAGCAAATATGAAGGGGTGGCTGCCATATTCAAAATCGGGAACAGCAAAGAAATTCCTGAAATTCCCAATCATCTTTCAAGTGATGCAAAGAGTTTTATCAAACTATGCTTGCAACGGGACCCGTCAGCGCGTCCAACAGCCTCACATTTGCTAGACCACCCTTTTGTCCGAGACCAAATGACTCCTACTAGTAAAGCTGCTAGCGTCAATGTGATGACCATGGATGCCTTTCCCCTCAATTTTGAAGGAATTCGGACCCCGCCAATATTGGATCATCATCCCACTAGGAAAAGTATAAGCTCATGTGATAATAGAGATTTCGAGTTGAACCCAGTACCGAGGACTTCAAGAGCAATGCGGGGCCTGAGTGAGAATGCAAGAATGATCACATCTCTACCTGTATCTCCATGTTCGAGTCCATTAAGACAATACAGAAGCAATTATCTCTCACCCCCTCACCCATCTTTTCCGACAATGGCGCAAGGCAGTTACAATGTAAACTACTCATCACATGCAGTTAGACCAATTGCCACTCTCGATCCTTGGCAAGAATCGTCTCTTTTTAGAGTCCAGGCACCCGGTGGGTCCCCACGAACAAGACTAATTTGA 1881 46.25 MPAWWGKKSSKNKDQSPRSSSSSLSKSTPIINKPSDKKPKSFDEVSAVIFSRNSPRSSKDYTSPRAGAGGSSGFSGFDSDSGEKTCHPLPRPQCFTIDHHAVGIGSGSGSVSSVSSSGSSDDHLISQDHGQLSSHRGLGDSKIDPRSRSPGPGSRGPTSPTSPLHPRFCGFNLMESPAGKVDDGKSQCHRLPLPPGSPTSPSSLPNPRTNGVTENSTTSTQPKWKKGRLLGRGTFGHVYLGFNSVNGQMCAIKEVRLVSDDQTSKECLKQLNQEINLLSQLSHPNIVRYYGSEMVDEALSVYLEYVSGGSIHKLLQEYGPFKEPVIQNYTRQIISGLAYLHGRNTVHRDIKGANILVDPHGEIKLADFGMAKHITNYGSMLSFKGSPYWMAPEVVMNTNGYSLAVDIWSLGCTILEMATSKPPWSKYEGVAAIFKIGNSKEIPEIPNHLSSDAKSFIKLCLQRDPSARPTASHLLDHPFVRDQMTPTSKAASVNVMTMDAFPLNFEGIRTPPILDHHPTRKSISSCDNRDFELNPVPRTSRAMRGLSENARMITSLPVSPCSSPLRQYRSNYLSPPHPSFPTMAQGSYNVNYSSHAVRPIATLDPWQESSLFRVQAPGGSPRTRLI 626
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 140232 144390 - Conep08aG0001900.1 Cone8ag0019 442568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0019 626 MobiDBLite consensus disorder prediction 47 79 - -
Cone8ag0019 626 MobiDBLite consensus disorder prediction 203 224 - -
Cone8ag0019 626 MobiDBLite consensus disorder prediction 1 227 - -
Cone8ag0019 626 Pfam Protein kinase domain 225 480 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0019 626 Gene3D Transferase(Phosphotransferase) domain 1 220 502 - -
Cone8ag0019 626 MobiDBLite consensus disorder prediction 15 34 - -
Cone8ag0019 626 SUPERFAMILY Protein kinase-like (PK-like) 223 567 IPR011009 -
Cone8ag0019 626 SMART serkin_6 224 480 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0019 626 ProSitePatterns Protein kinases ATP-binding region signature. 230 253 IPR017441 GO:0005524(InterPro)
Cone8ag0019 626 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 14 487 IPR050538 -
Cone8ag0019 626 ProSiteProfiles Protein kinase domain profile. 224 480 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0019 626 MobiDBLite consensus disorder prediction 106 134 - -
Cone8ag0019 626 FunFam Mitogen-activated protein kinase kinase kinase 222 504 - -
Cone8ag0019 626 CDD STKc_MEKK1_plant 223 480 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0072 Cone-Chr14:390001 Cone8ag0019 Cone-Chr8:140232 2.90E-120 dispersed
Cone15ag0075 Cone-Chr15:412549 Cone8ag0019 Cone-Chr8:140232 9.74E-134 dispersed
Cone1ag1174 Cone-Chr1:55782217 Cone8ag0019 Cone-Chr8:140232 2.13E-142 dispersed
Cone4ag0218 Cone-Chr4:999361 Cone8ag0019 Cone-Chr8:140232 1.02E-82 dispersed
Cone4ag0888 Cone-Chr4:6361613 Cone8ag0019 Cone-Chr8:140232 3.51E-32 dispersed
Cone5ag0881 Cone-Chr5:3773994 Cone8ag0019 Cone-Chr8:140232 6.16E-138 dispersed
Cone6ag1378 Cone-Chr6:11065392 Cone8ag0019 Cone-Chr8:140232 1.23E-80 dispersed
Cone7ag0228 Cone-Chr7:966856 Cone8ag0019 Cone-Chr8:140232 2.43E-72 dispersed
Cone8ag0019 Cone-Chr8:140232 Cone8ag0112 Cone-Chr8:570627 9.15E-106 dispersed
Cone12ag0023 Cone-Chr12:182913 Cone8ag0019 Cone-Chr8:140232 0 wgd
Cone4ag1555 Cone-Chr4:11959759 Cone8ag0019 Cone-Chr8:140232 1.63E-93 wgd
Cone6ag1281 Cone-Chr6:10240385 Cone8ag0019 Cone-Chr8:140232 1.00E-236 wgd
Cone8ag0019 Cone-Chr8:140232 Cone9ag1239 Cone-Chr9:9076150 1.72E-232 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83084 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0019 K04421 - cit:102607672 763.837