Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone8ag0019 | ATGCCTGCTTGGTGGGGGAAAAAGTCGAGTAAGAACAAAGATCAAAGCCCACGAAGTAGCTCCAGTAGCTTATCAAAATCAACGCCCATCATCAACAAGCCTAGCGATAAGAAACCCAAGAGCTTTGACGAGGTCTCCGCCGTGATTTTCTCCAGAAACTCGCCACGGTCGAGCAAGGACTATACTTCTCCACGAGCTGGAGCCGGCGGCTCTTCTGGGTTTTCTGGTTTCGATTCAGATTCGGGCGAGAAGACGTGTCATCCTCTTCCTCGCCCGCAGTGCTTTACTATTGATCATCATGCGGTTGGTATTGGATCTGGGTCGGGTTCGGTTTCTAGTGTCAGCTCATCTGGGTCGTCCGATGATCATCTGATCTCTCAGGATCATGGCCAATTAAGTTCTCACAGGGGGCTTGGTGATTCCAAAATAGACCCGAGGTCGAGAAGCCCAGGCCCAGGGTCTAGGGGGCCCACAAGCCCGACATCACCTCTCCACCCACGGTTTTGCGGATTTAATCTAATGGAGTCTCCAGCGGGAAAGGTAGACGATGGGAAGAGTCAATGTCATAGGCTACCCCTTCCACCAGGTTCTCCTACAAGCCCTTCTTCCTTGCCCAACCCAAGAACTAATGGCGTGACAGAAAACTCAACAACTTCCACACAACCAAAATGGAAGAAAGGAAGGCTTCTTGGAAGGGGCACATTCGGGCATGTTTACCTTGGTTTTAACAGTGTTAATGGACAAATGTGTGCAATCAAAGAAGTCAGGCTCGTAAGCGATGACCAGACATCTAAAGAATGTCTCAAGCAACTGAATCAGGAGATAAATTTGCTTAGTCAGCTTTCACATCCTAACATTGTTAGATATTATGGAAGTGAGATGGTTGATGAGGCACTCTCTGTCTATTTAGAATATGTGTCAGGTGGTTCAATCCACAAATTACTTCAAGAGTACGGCCCTTTTAAAGAACCTGTTATACAGAACTACACACGACAGATTATTTCCGGGCTTGCTTATCTACATGGAAGGAATACTGTGCACAGGGATATCAAAGGAGCCAACATATTGGTAGATCCTCACGGCGAGATCAAGTTGGCAGACTTTGGGATGGCTAAACATATAACAAATTACGGTTCGATGCTTTCTTTCAAAGGAAGTCCTTATTGGATGGCACCTGAGGTCGTAATGAATACAAATGGCTATAGTCTTGCTGTTGATATATGGAGCTTGGGTTGTACAATCCTGGAAATGGCAACATCAAAACCACCTTGGAGCAAATATGAAGGGGTGGCTGCCATATTCAAAATCGGGAACAGCAAAGAAATTCCTGAAATTCCCAATCATCTTTCAAGTGATGCAAAGAGTTTTATCAAACTATGCTTGCAACGGGACCCGTCAGCGCGTCCAACAGCCTCACATTTGCTAGACCACCCTTTTGTCCGAGACCAAATGACTCCTACTAGTAAAGCTGCTAGCGTCAATGTGATGACCATGGATGCCTTTCCCCTCAATTTTGAAGGAATTCGGACCCCGCCAATATTGGATCATCATCCCACTAGGAAAAGTATAAGCTCATGTGATAATAGAGATTTCGAGTTGAACCCAGTACCGAGGACTTCAAGAGCAATGCGGGGCCTGAGTGAGAATGCAAGAATGATCACATCTCTACCTGTATCTCCATGTTCGAGTCCATTAAGACAATACAGAAGCAATTATCTCTCACCCCCTCACCCATCTTTTCCGACAATGGCGCAAGGCAGTTACAATGTAAACTACTCATCACATGCAGTTAGACCAATTGCCACTCTCGATCCTTGGCAAGAATCGTCTCTTTTTAGAGTCCAGGCACCCGGTGGGTCCCCACGAACAAGACTAATTTGA | 1881 | 46.25 | MPAWWGKKSSKNKDQSPRSSSSSLSKSTPIINKPSDKKPKSFDEVSAVIFSRNSPRSSKDYTSPRAGAGGSSGFSGFDSDSGEKTCHPLPRPQCFTIDHHAVGIGSGSGSVSSVSSSGSSDDHLISQDHGQLSSHRGLGDSKIDPRSRSPGPGSRGPTSPTSPLHPRFCGFNLMESPAGKVDDGKSQCHRLPLPPGSPTSPSSLPNPRTNGVTENSTTSTQPKWKKGRLLGRGTFGHVYLGFNSVNGQMCAIKEVRLVSDDQTSKECLKQLNQEINLLSQLSHPNIVRYYGSEMVDEALSVYLEYVSGGSIHKLLQEYGPFKEPVIQNYTRQIISGLAYLHGRNTVHRDIKGANILVDPHGEIKLADFGMAKHITNYGSMLSFKGSPYWMAPEVVMNTNGYSLAVDIWSLGCTILEMATSKPPWSKYEGVAAIFKIGNSKEIPEIPNHLSSDAKSFIKLCLQRDPSARPTASHLLDHPFVRDQMTPTSKAASVNVMTMDAFPLNFEGIRTPPILDHHPTRKSISSCDNRDFELNPVPRTSRAMRGLSENARMITSLPVSPCSSPLRQYRSNYLSPPHPSFPTMAQGSYNVNYSSHAVRPIATLDPWQESSLFRVQAPGGSPRTRLI | 626 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 140232 | 144390 | - | Conep08aG0001900.1 | Cone8ag0019 | 442568 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone8ag0019 | 626 | MobiDBLite | consensus disorder prediction | 47 | 79 | - | - | |
Cone8ag0019 | 626 | MobiDBLite | consensus disorder prediction | 203 | 224 | - | - | |
Cone8ag0019 | 626 | MobiDBLite | consensus disorder prediction | 1 | 227 | - | - | |
Cone8ag0019 | 626 | Pfam | Protein kinase domain | 225 | 480 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone8ag0019 | 626 | Gene3D | Transferase(Phosphotransferase) domain 1 | 220 | 502 | - | - | |
Cone8ag0019 | 626 | MobiDBLite | consensus disorder prediction | 15 | 34 | - | - | |
Cone8ag0019 | 626 | SUPERFAMILY | Protein kinase-like (PK-like) | 223 | 567 | IPR011009 | - | |
Cone8ag0019 | 626 | SMART | serkin_6 | 224 | 480 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone8ag0019 | 626 | ProSitePatterns | Protein kinases ATP-binding region signature. | 230 | 253 | IPR017441 | GO:0005524(InterPro) | |
Cone8ag0019 | 626 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 14 | 487 | IPR050538 | - | |
Cone8ag0019 | 626 | ProSiteProfiles | Protein kinase domain profile. | 224 | 480 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone8ag0019 | 626 | MobiDBLite | consensus disorder prediction | 106 | 134 | - | - | |
Cone8ag0019 | 626 | FunFam | Mitogen-activated protein kinase kinase kinase | 222 | 504 | - | - | |
Cone8ag0019 | 626 | CDD | STKc_MEKK1_plant | 223 | 480 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone14ag0072 | Cone-Chr14:390001 | Cone8ag0019 | Cone-Chr8:140232 | 2.90E-120 | dispersed | |
Cone15ag0075 | Cone-Chr15:412549 | Cone8ag0019 | Cone-Chr8:140232 | 9.74E-134 | dispersed | |
Cone1ag1174 | Cone-Chr1:55782217 | Cone8ag0019 | Cone-Chr8:140232 | 2.13E-142 | dispersed | |
Cone4ag0218 | Cone-Chr4:999361 | Cone8ag0019 | Cone-Chr8:140232 | 1.02E-82 | dispersed | |
Cone4ag0888 | Cone-Chr4:6361613 | Cone8ag0019 | Cone-Chr8:140232 | 3.51E-32 | dispersed | |
Cone5ag0881 | Cone-Chr5:3773994 | Cone8ag0019 | Cone-Chr8:140232 | 6.16E-138 | dispersed | |
Cone6ag1378 | Cone-Chr6:11065392 | Cone8ag0019 | Cone-Chr8:140232 | 1.23E-80 | dispersed | |
Cone7ag0228 | Cone-Chr7:966856 | Cone8ag0019 | Cone-Chr8:140232 | 2.43E-72 | dispersed | |
Cone8ag0019 | Cone-Chr8:140232 | Cone8ag0112 | Cone-Chr8:570627 | 9.15E-106 | dispersed | |
Cone12ag0023 | Cone-Chr12:182913 | Cone8ag0019 | Cone-Chr8:140232 | 0 | wgd | |
Cone4ag1555 | Cone-Chr4:11959759 | Cone8ag0019 | Cone-Chr8:140232 | 1.63E-93 | wgd | |
Cone6ag1281 | Cone-Chr6:10240385 | Cone8ag0019 | Cone-Chr8:140232 | 1.00E-236 | wgd | |
Cone8ag0019 | Cone-Chr8:140232 | Cone9ag1239 | Cone-Chr9:9076150 | 1.72E-232 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
83084 | None | None | None | None | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone8ag0019 | K04421 | - | cit:102607672 | 763.837 |