Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone8ag0029 | ATGAACATTAACAACACTTGGCCGGATCTTGATCATATTGCCTCCGGCATTGATGAAGAACTTCATGATCATGATCATAATTTCCTACTTCCTTCTCCCCAACTTCACTTTGATTTTCTTTGGCCTACCTGCAATAATACCTCTCTAATTCAACCCCATCATAGTTTACCTTCCTCATCTTCAAGCCATGTTCCAACCTTATTCCATTTTGGACATCAATCAGAAATCCTCCATCGTGTGGTGGGGAGGAATGAGGATCAAGATAAGGAAGAAGAAGAAGAAGATAAAGATCATGAAGAAGATTCGGAAGAAGAAGAGCTTGGCGCCATGAAGGAGATGATGTTCAAGATTTCCGCAATGCAGCCGGTAGATATCGATCCCGCTACGCTCAGAAAACCGAAGCGAAGGAACGTATGGATAAGCGACGACCCCCAGAGCGTGGCCGCCCGTCTCAGGAGAGAGAGAATAAGCGAGAAAGTCCGTATTCTCCAAAGACTTGTTCCCGGAGGAACAAAGATGGACACGGCTTCCATGTTAGATGAAGCGGTCCGTTATGTGAAGTTTCTGAAGCGACACATCCGTCTCTTACAATCGAATCATCGACACCACTGTAATAATGATGGTATCACCTCCGTCGGGCCCGGATCCACTCCCATCCCAAACTGGCCGTTTAGAGCACCTCAACAAGTGAACGGCTCGGTTGACGTTAGAGCCTCCACCTCTACTGAGCCGTCAGCCGCCCATTTGGATGGAAAAATCATGGGGTTTAATTAA | 774 | 46.64 | MNINNTWPDLDHIASGIDEELHDHDHNFLLPSPQLHFDFLWPTCNNTSLIQPHHSLPSSSSSHVPTLFHFGHQSEILHRVVGRNEDQDKEEEEEDKDHEEDSEEEELGAMKEMMFKISAMQPVDIDPATLRKPKRRNVWISDDPQSVAARLRRERISEKVRILQRLVPGGTKMDTASMLDEAVRYVKFLKRHIRLLQSNHRHHCNNDGITSVGPGSTPIPNWPFRAPQQVNGSVDVRASTSTEPSAAHLDGKIMGFN | 257 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 191897 | 192670 | - | Conep08aG0002900.1 | Cone8ag0029 | 442578 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone8ag0029 | 257 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 140 | 189 | IPR011598 | GO:0046983(InterPro) | |
Cone8ag0029 | 257 | MobiDBLite | consensus disorder prediction | 79 | 105 | - | - | |
Cone8ag0029 | 257 | FunFam | BHLH transcription factor | 143 | 207 | - | - | |
Cone8ag0029 | 257 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 146 | 200 | IPR036638 | GO:0046983(InterPro) | |
Cone8ag0029 | 257 | SMART | finulus | 146 | 195 | IPR011598 | GO:0046983(InterPro) | |
Cone8ag0029 | 257 | PANTHER | TRANSCRIPTION FACTOR HEC3-RELATED | 48 | 234 | IPR045843 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone8ag0029 | 257 | MobiDBLite | consensus disorder prediction | 87 | 105 | - | - | |
Cone8ag0029 | 257 | CDD | bHLH_AtIND_like | 141 | 199 | - | - | |
Cone8ag0029 | 257 | Pfam | Helix-loop-helix DNA-binding domain | 149 | 190 | IPR011598 | GO:0046983(InterPro) | |
Cone8ag0029 | 257 | Gene3D | - | 144 | 207 | IPR036638 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone12ag0123 | Cone-Chr12:659774 | Cone8ag0029 | Cone-Chr8:191897 | 1.19E-37 | dispersed | |
Cone4ag1582 | Cone-Chr4:12098263 | Cone8ag0029 | Cone-Chr8:191897 | 5.07E-36 | dispersed | |
Cone7ag1368 | Cone-Chr7:9902948 | Cone8ag0029 | Cone-Chr8:191897 | 1.43E-36 | dispersed | |
Cone8ag0029 | Cone-Chr8:191897 | Cone8ag0130 | Cone-Chr8:670288 | 3.62E-37 | dispersed | |
Cone12ag0027 | Cone-Chr12:214122 | Cone8ag0029 | Cone-Chr8:191897 | 3.89E-133 | wgd | |
Cone8ag0029 | Cone-Chr8:191897 | Cone9ag1243 | Cone-Chr9:9107450 | 1.13E-46 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46612 | PF11910 | NdhO | 7.20E-13 | No_clan | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone8ag0029 | - | - | - | 0.0 |