Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0055 ATGGAAGGCTGGAAAAAACCTTACTTAGCTGTGATTTTAGTACAAGCAATATATTCTGTCATGTTCTTGATCTCTAAAGCAGCATTTGATGGCGGTATGAACAACTTCATCTTTGTTTTCTATAGGCAAGTCATAGCCACCATCTTCTTAGCTCCACTCGCTCTTTATTTCAAATGGATTACAATAAGTCTGGATTTGTATGGGGTTGCTCTTGTTTATACTTCTGCAACATTGGCTGCCGCAACTACAAACTGTCTTCCTGTCATAACCTTCTTCTTGGCTCTTCTACTCAGGATGGAGGTGGTGAGATTAAGGACAAGTGAAGGGATAGCAAAGATTGCAGGTATGGTGATCTGCATGGGTGGTGTAGCCACCCTAGCTTTTTACAAGGGCCCTCATTTTAGACTCTTCTTCATCCATAATCACCAGTTGAAGCAGCATCATAGCCAAGACCAGATAGCAAGTAAACATCATGTTCCTTCCGGTAATACATGGATGAAAGGCTGCTTCCTCATGCTTGCTTCCAACACTTTTTGGGGTCTATGGCTTGTCTTACAGGCATTAGTAATGAAGAGTTACCCTTCAAAGCTTCTCTTTACTACTCTTCAATGTCTCTTTAGCTCAATCCAGTCACTTGCCATTGCCCTTGCTCTGGAGAGAGACCCTTATCAATGGAAACTTGGTTGGAATCTTAGACTCGTCGCCGTCGCTTACTGTGGTATGGTCGTGACGGGGGTTACATACTACCTACAAGCATGGGTGATAGAGAAGAAAGGGCCGGTTTTTGTAGCCATGTCGACACCGTTGGCGCTTATCATAACAATATTCTCGTCGGCAATCATTCTAGGAGAGAATGTTACTCTTGGAAGTCTTCTAGGTGGAGTGTTGTTGGTAGTAGGACTTTATAGCATTCTATGGGGGAAGAACAGTGAACAAAAACTAAAGGACAGTGACCAACGTCGTCGTTTAGATGAAGAAGTTGGCAAGGAATCATGCTCAGAAGAGAAAGAAATGAAGGCTCTTTCTGGCTAA 1032 43.02 MEGWKKPYLAVILVQAIYSVMFLISKAAFDGGMNNFIFVFYRQVIATIFLAPLALYFKWITISLDLYGVALVYTSATLAAATTNCLPVITFFLALLLRMEVVRLRTSEGIAKIAGMVICMGGVATLAFYKGPHFRLFFIHNHQLKQHHSQDQIASKHHVPSGNTWMKGCFLMLASNTFWGLWLVLQALVMKSYPSKLLFTTLQCLFSSIQSLAIALALERDPYQWKLGWNLRLVAVAYCGMVVTGVTYYLQAWVIEKKGPVFVAMSTPLALIITIFSSAIILGENVTLGSLLGGVLLVVGLYSILWGKNSEQKLKDSDQRRRLDEEVGKESCSEEKEMKALSG 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 281506 283958 - Conep08aG0005500.1 Cone8ag0055 442604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0055 343 PANTHER WAT1-RELATED PROTEIN 9 323 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cone8ag0055 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 131 - -
Cone8ag0055 343 MobiDBLite consensus disorder prediction 317 343 - -
Cone8ag0055 343 Pfam EamA-like transporter family 166 305 IPR000620 GO:0016020(InterPro)
Cone8ag0055 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 212 310 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag0379 Cone-Chr20:1766663 Cone8ag0055 Cone-Chr8:281506 5.96E-71 dispersed
Cone8ag0055 Cone-Chr8:281506 Cone8ag0969 Cone-Chr8:9136776 1.21E-59 dispersed
Cone8ag0055 Cone-Chr8:281506 Cone17ag0785 Cone-Chr17:6051298 8.76E-93 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0055 - - - 0.0