Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0057 ATGGCAAAATCAGCAGAGCAAGAGCACCCACAAAAAGCTTTTGGTTGGGCAGCTAGAGATGCTTCTGGTTCTTTATCCCCCTTCCATTTCTCAAGAAGGGAAAATGGTGATGAAGATGTTACAGTGAAAGTTCTTTACTGTGGAGTTTGCCATTCTGACCTTCATACTGCCAAGAATGAATGGGGTTTCACAAATTACCCTGTTGTTCCTGGGCATGAAATTGTTGGTGTGATAACCAAGCTTGGGAAAAACGTGAAGAAATTCAAAGAAGGCGACCAGGTAGGAGTTGGAGTCATAATTGGATCATGCAAAAGCTGTGAGCAATGCAACCAAGACTCAGAAAATTACTGCTCCAAGTTGATTTTCACCTACAACTCACATTCATATGACGGGACAAAAAATTACGGTGGTTACTCCGATATTATGGTCGTGGATCAACATTTTGTTCTCCGTTTTCCCAATAATTTACCCCCTGATGCTGGTGCTCCGCTTCTATGTGCCGGAATTACTATTTATAGCCCGATGAAATATTACGGAATGACCGAGCCAGGTAAGCATCTAGGCATAGCCGGGCTTGGAGGGCTTGGCCATGTTGCTGTGAAAATAGGTAAAGCATTCGGGTTGAAAGTTACAGTTATTAGTTCTTCATCGAGAAAGGAGGAGGAGGCAATAAAGAGACTTGGGGCAGATTCTTTCCTTGTTTCTAGTGACCCGGTTAAAATGAAGGCTGCAATGGGTAGTATGGATTTCATAATCGATACAGTTTCTGCTATTCATCCCCTTTCTCCTCTGCTGAGTCTTCTGAAGATTAATGGGAAGCTTGTCACTTTGGGTTTGCCTGAGAAGCCTTTAGAGTTACCTATCTTTCCTCTAGTACTGGGGAGAAAGATGATTGGGGGAAGTGATATAGGGGGAATGAAAGAGACACAGGAGATGCTAGACTTTTGTGGAAAGCACAATATTGCAGCAGATATCGAGCTGATTCGTATGGAAGACATTAACAAAGCCATGGAAAGGCTTGCCAAATCCGATGTTCGTTATCGGTTTGTGATAGATATTGGTAACTCATTGTCAAAGTAA 1080 42.69 MAKSAEQEHPQKAFGWAARDASGSLSPFHFSRRENGDEDVTVKVLYCGVCHSDLHTAKNEWGFTNYPVVPGHEIVGVITKLGKNVKKFKEGDQVGVGVIIGSCKSCEQCNQDSENYCSKLIFTYNSHSYDGTKNYGGYSDIMVVDQHFVLRFPNNLPPDAGAPLLCAGITIYSPMKYYGMTEPGKHLGIAGLGGLGHVAVKIGKAFGLKVTVISSSSRKEEEAIKRLGADSFLVSSDPVKMKAAMGSMDFIIDTVSAIHPLSPLLSLLKINGKLVTLGLPEKPLELPIFPLVLGRKMIGGSDIGGMKETQEMLDFCGKHNIAADIELIRMEDINKAMERLAKSDVRYRFVIDIGNSLSK 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 295123 297917 + Conep08aG0005700.1 Cone8ag0057 442606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0057 359 FunFam probable cinnamyl alcohol dehydrogenase 16 175 - -
Cone8ag0057 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
Cone8ag0057 359 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Cone8ag0057 359 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Cone8ag0057 359 Pfam Alcohol dehydrogenase GroES-like domain 36 153 IPR013154 -
Cone8ag0057 359 Gene3D - 167 323 - -
Cone8ag0057 359 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491(InterPro)
Cone8ag0057 359 Pfam Zinc-binding dehydrogenase 194 316 IPR013149 -
Cone8ag0057 359 CDD CAD1 14 352 IPR047109 GO:0016616(InterPro)
Cone8ag0057 359 Gene3D - 16 353 - -
Cone8ag0057 359 PANTHER ALDEHYDE REDUCTASE 5 356 IPR047109 GO:0009809(PANTHER)|GO:0016616(InterPro)|GO:0016616(PANTHER)|GO:0045551(PANTHER)
Cone8ag0057 359 SUPERFAMILY GroES-like 20 185 IPR011032 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0206 Cone-Chr12:1048994 Cone8ag0057 Cone-Chr8:295123 2.77E-185 dispersed
Cone12ag0828 Cone-Chr12:7509169 Cone8ag0057 Cone-Chr8:295123 3.72E-18 dispersed
Cone12ag1069 Cone-Chr12:8816572 Cone8ag0057 Cone-Chr8:295123 6.51E-128 dispersed
Cone3ag1002 Cone-Chr3:28822246 Cone8ag0057 Cone-Chr8:295123 1.42E-60 dispersed
Cone4ag1996 Cone-Chr4:13952663 Cone8ag0057 Cone-Chr8:295123 5.56E-154 dispersed
Cone6ag1514 Cone-Chr6:11963213 Cone8ag0057 Cone-Chr8:295123 6.11E-32 dispersed
Cone8ag0057 Cone-Chr8:295123 Cone8ag0199 Cone-Chr8:1053508 6.01E-168 dispersed
Cone12ag0052 Cone-Chr12:301583 Cone8ag0057 Cone-Chr8:295123 4.18E-258 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0057 K00083 - rcu:8267993 602.823