Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0155 ATGGGGCGTTTCAATCTTATCAGCCTGGCATTGATATCACTTTTCTTGTTTGCCCCAACAACAGTAGTAGTATTTGCACAAGTACTTAGACAGAATTTCTATGCAAATAGCTGCCCGAATGTGGAGGCCATTGTTAAAACCGCCGTCGAGAAGAAGTTTACTGAAACATTCGTGACCGTTCCGGCCACAATTCGGCTCTTCTTCCACGACTGTTTTGTTCAGGGATGTGATGCCTCGGTTATCGTTGCTTCCACTGCAAGCAACACGGCCGAGAAGGACCACCCGGATAATCTTTCTTTAGCTGGAGATGGATTCGACACGGTTATCAAAGCTAAAACAGCAGTTGATGCGGTCCCCGGATGTACTAACAAAGTGTCTTGTGCAGATATTCTCGCTCTGGCTACAAGGGATGTTATTGCACTGGCCGGTGGGCCTGCATATGATGTGGAGCTAGGGAGATTGGACGGGCTAGTTTCAAGAGCTTCGGATGTGAACGGGAAGTTACCTCATCCCGAGTTCAATCTCAATCAGCTTAATACCATGTTTGCTGCTAATGGTCTCTCCCAGCAAGACATGGTGGCTCTCTCTGCGGCACATACCGTTGGATTCTCTCATTGTAGCAAGGTGGCCAACAGGATTTACAATTTCAGTAAAAGGAACCCAGTGGACCCTTCTCTCAACCAGACATACGCAGCCCAGTTACGACAACTTTGCCCACAAGATGTGGACCCCAGAATAGCCATCAACATGGATCCAAACACGCCCAGAAAATTTGACACCATGTTCTTTAAGAATCTTCAGCAGAAGATGGGCCTATTCACTTCGGACCAACTTTTGTTTGACGATCCAAGGTCCAGGCCTCTTGTGAATTCTTGGGCTCATAGCTCCTCAACCTTTTCTAAGGCCTTCGTTCAGGCCATCACAAATTTGGGCCGAGTCGGAGTCAAGACCGGATCGAATGGGAACATTCGTCGTGATTGTGGAGCATTTAATAGTTAA 999 47.35 MGRFNLISLALISLFLFAPTTVVVFAQVLRQNFYANSCPNVEAIVKTAVEKKFTETFVTVPATIRLFFHDCFVQGCDASVIVASTASNTAEKDHPDNLSLAGDGFDTVIKAKTAVDAVPGCTNKVSCADILALATRDVIALAGGPAYDVELGRLDGLVSRASDVNGKLPHPEFNLNQLNTMFAANGLSQQDMVALSAAHTVGFSHCSKVANRIYNFSKRNPVDPSLNQTYAAQLRQLCPQDVDPRIAINMDPNTPRKFDTMFFKNLQQKMGLFTSDQLLFDDPRSRPLVNSWAHSSSTFSKAFVQAITNLGRVGVKTGSNGNIRRDCGAFNS 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 800105 801596 + Conep08aG0015700.1 Cone8ag0155 442704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0155 332 Gene3D Peroxidase, domain 2 169 310 - -
Cone8ag0155 332 FunFam Peroxidase 169 310 - -
Cone8ag0155 332 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0155 332 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0155 332 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0155 332 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0155 332 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0155 332 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0155 332 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0155 332 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0155 332 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0155 332 SUPERFAMILY Heme-dependent peroxidases 29 331 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0155 332 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601(InterPro)
Cone8ag0155 332 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0155 332 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0155 332 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0155 332 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0155 332 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0155 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Cone8ag0155 332 CDD secretory_peroxidase 29 330 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone8ag0155 332 Gene3D - 32 331 - -
Cone8ag0155 332 PANTHER - 18 331 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0155 332 Pfam Peroxidase 45 294 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0155 332 ProSiteProfiles Plant heme peroxidase family profile. 28 331 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0155 332 FunFam Peroxidase 32 179 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0123 Cone-Chr19:688592 Cone8ag0155 Cone-Chr8:800105 2.38E-84 dispersed
Cone2ag0152 Cone-Chr2:793258 Cone8ag0155 Cone-Chr8:800105 7.79E-95 dispersed
Cone4ag1856 Cone-Chr4:13321633 Cone8ag0155 Cone-Chr8:800105 2.09E-143 dispersed
Cone8ag0155 Cone-Chr8:800105 Cone9ag1372 Cone-Chr9:10271697 3.69E-170 dispersed
Cone12ag0160 Cone-Chr12:814036 Cone8ag0155 Cone-Chr8:800105 2.69E-32 wgd
Cone6ag1447 Cone-Chr6:11576611 Cone8ag0155 Cone-Chr8:800105 1.03E-169 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0155 K00430 - csv:101206860 501.13