Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0188 ATGATACCTCTTAAACTATCCTGCTTTTCTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGCAGATTTTTGTGCAAGAGTCATTATCTATTGGATTAGATTCGGAGATCTTAATTCGGGTCAAGAATCATTATCTAGACGATCCGGATAATTTTCTCAAGGATTGGGTTCGAGATAGAGATCAGACCCCATGTAATTGGACTGGAATTACATGTGATGATAAGAATCACTCAGTCACTGCAATTGATCTTTCCGGCTTGGGGATTTCCGGTCCGTTTCCGTTTGACTTTTGCCGGATTCGGACCCTCAAAAACCTTTCTCTACCGGACAATAACATATACGGCAGCGTTTCATCCAATACTCTGTCTCTCTGCTCTCGCCTTCAATTACTCAACCTCTCTGCCAACTACATCGTCGGAGACTTGCCGGAGTTGACGCCTGACTTCATTGACTTACAAGTACTCGATCTTTCTTACAACAACTTCTCCGGCGCGATTCCAGAGAGTTTCGGCCGGTTACCGAGTCTTCAAGTGCTTGATATTATCCAGAATTTGCTCAACGAGTCGATTCCTTCTTTTTTAGGTAATCTCACTGAGTTGACTCGGCTTGAACTCGCTTATAATCCATTAAAGCCAAGTATTTTACCGCCTGAAATCGGAAATCTATCTAAGCTCGAGAATCTATTTCTACCATCTGCAAATCTAATCGGAACTATACCGGACTCGATCGGGAAGCTCATCTCACTAAAAAATCTCGATCTAAGTAGAAATTCTCTATCAGGTAAGATTCCTAATACGATTGGTGAATTGAGAAATGTGGAACAAATCGAGCTATATGAGAATCAATTTTTCGGTGAAATGCCTGAAAGCATTGGTAATTTGACGAATCTGCTTCGGCTCGATGTTTCTCAAAACAATATTAGAGGAAAGTTACCGGAAAATGTTGCAGCATTGCGTCTAGAATCTCTGAATCTGAATGATAATCTATTTGAAGGTGAAGTTCCAGAAATCTTAGCTTTGAATCCTAATCTAGTTCAATTGAAGCTTTTCAACAACAGCTTTACAGGAAAATTACCGAAAAATTTAGGTCAAAATTCGGACTTGACGGATTTTGATGTCTCGACGAACAATTTCATGGGTGGATTGCCGAAATACCTCTGTCATAGGAAGAAGCTTCAACGTCTGATCACTTTCAGCAATGGATTCTCTGGAAATTTTCCGGAGTTGCTAGGCGAGTGCGACTCTCTCAGCTATATAAGAATCGAGAACAATCGATTCACTGGTGAAGTGCCAAACGGTTTCTGGAGCCTTCCTCTGCTTGAACACTTCGATTTGAGTAATAACGCATTTCATGGCTCTATTCCTGCTTCGATCTCCCCTGCTCCTGCAATTACAGACTTTCTGATCTCCGGAAACAACTTCTCCGGCAAATTGCCTGCCGGAATCTGCAAATTGCGCGAGGTCATCAGATTCGACGGGAGCAGCAACAAATTCTCCGGCGAACTTCCTTCTTGTATAACTAGCTTGAAGAAATTACAGAACCTCGAAATGCAAGAGAATACGTTTTCCGGCCAGATTCCGAGGACAGTCAGATCGTGGATTGTGTTAACCGAATTAAATCTCTCCAGTAACAGATTCTCCGGTCAGATTCCGTCTCAGCTCGGAGATTTGCCGGTCCTGACTTATCTAGATCTTTCTAGAAACCTTCTCTCCGGCGAAATTCCCCCGGAATTAACGAAGTTGAAGCTTAACGAATTCAACTTATCAGAAAACGAACTGTACGGTAAGATTCCTTCAGCTTTTGATCATGAACTGTTTGTTTCAAGTCTAATGGGTAACCCGAATCTATGTAGTTCGGATCTTAAACCGTTCCGCCTATGCAAAATATCCAAACTCGCTGCCTCATACGTTGTGGTTATAGTTTTAGTCATCTGTGTTCTACTATTAATCGGGTCTCTCTTACTGTTTATACGGGGCAAGTGGCATTTATTTCCGTTGAAACGAAAGAGCCAATGGAAAGTAACCCAGTTTCAACGGGTCGGGTTCACTGCAAAAGAAGTGATCCAACAATTAACAAACTCAAACTTGATCGGGACAGGTGGGTCGGGTAGTGTCTATAAAGTGAAGCTCAGGACAGGGCATGTAGTTGCTGCGAAAAGACTTTGGACGGGCCATCGTGAAACAGAAAGTGAGTTGGTATTTCGATCTGAGGTCGAGACACTGGGTCGGATTCGCCATGGCAATATTGTGAAACTGATATTTAGTTGTAGTGGCGGCAAGGAAGGTAGAATTTTGGTATACGAGTATATGGAGAATGGGAGCTTAGGGAATGTGTTGCATGGGGAGAAAACCGGGGAAGTGTTGGACTGGGCGAGGAGGTTGAATATTGCTGTGGGTGCGGGTCAGGGGCTGGCATATCTTCATCATGATTGTGTGCCGGCTATAGTGCATCGAGACGTGAAGAGTAATAACATTTTGTTGGATGGCGAGTTTGATCCCCGTGTGGCCGATTTCGGGTTGGCTAAGACGTTGCAGCATGACGCTAGTGATGGCGGGTCCATGTCATGTGTTGCCGGGTCTTATGGTTACATCGCGCCTGAGTACGGTTATACGATGAAAGTGACCGAGAAGAGTGATGTCTACAGTTTCGGGATAGTGTTGATGGAACTAGTTACGGGTAAGAGGCCGAATGATTTCTCCTTTGGCGAGGAGAAAGACATTGTGAAGTGGGTTAAAGATTTTACTTTATCATCATCATCATTGTTTGAAGAAGGAAGTGGAATAAAAAGAGATTTGAGCCATCTCATTGACCCTAGAATGGGTCCATTATCGTCTTGTGATCTTGAGATGATAGAGAAGGTTTTGGATGTGGCCTTGCTTTGCACATCACCGTTGCCCATCGACAGGCCCTCCATGAGACGGGCTGTTGAGTTGCTCAACCCGAAATTGAACCGTGCAACGTCACAAACCAGTAGGAGCGATTAG 2994 43.55 MIPLKLSCFSSFFFFFFFFFFFFLQIFVQESLSIGLDSEILIRVKNHYLDDPDNFLKDWVRDRDQTPCNWTGITCDDKNHSVTAIDLSGLGISGPFPFDFCRIRTLKNLSLPDNNIYGSVSSNTLSLCSRLQLLNLSANYIVGDLPELTPDFIDLQVLDLSYNNFSGAIPESFGRLPSLQVLDIIQNLLNESIPSFLGNLTELTRLELAYNPLKPSILPPEIGNLSKLENLFLPSANLIGTIPDSIGKLISLKNLDLSRNSLSGKIPNTIGELRNVEQIELYENQFFGEMPESIGNLTNLLRLDVSQNNIRGKLPENVAALRLESLNLNDNLFEGEVPEILALNPNLVQLKLFNNSFTGKLPKNLGQNSDLTDFDVSTNNFMGGLPKYLCHRKKLQRLITFSNGFSGNFPELLGECDSLSYIRIENNRFTGEVPNGFWSLPLLEHFDLSNNAFHGSIPASISPAPAITDFLISGNNFSGKLPAGICKLREVIRFDGSSNKFSGELPSCITSLKKLQNLEMQENTFSGQIPRTVRSWIVLTELNLSSNRFSGQIPSQLGDLPVLTYLDLSRNLLSGEIPPELTKLKLNEFNLSENELYGKIPSAFDHELFVSSLMGNPNLCSSDLKPFRLCKISKLAASYVVVIVLVICVLLLIGSLLLFIRGKWHLFPLKRKSQWKVTQFQRVGFTAKEVIQQLTNSNLIGTGGSGSVYKVKLRTGHVVAAKRLWTGHRETESELVFRSEVETLGRIRHGNIVKLIFSCSGGKEGRILVYEYMENGSLGNVLHGEKTGEVLDWARRLNIAVGAGQGLAYLHHDCVPAIVHRDVKSNNILLDGEFDPRVADFGLAKTLQHDASDGGSMSCVAGSYGYIAPEYGYTMKVTEKSDVYSFGIVLMELVTGKRPNDFSFGEEKDIVKWVKDFTLSSSSLFEEGSGIKRDLSHLIDPRMGPLSSCDLEMIEKVLDVALLCTSPLPIDRPSMRRAVELLNPKLNRATSQTSRSD 997
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 982485 985561 - Conep08aG0019100.1 Cone8ag0188 442737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0188 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 818 830 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag0188 997 SMART serkin_6 694 986 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0188 997 ProSitePatterns Protein kinases ATP-binding region signature. 700 722 IPR017441 GO:0005524(InterPro)
Cone8ag0188 997 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Cone8ag0188 997 FunFam Leucine-rich receptor-like protein kinase family protein 218 316 - -
Cone8ag0188 997 Pfam Leucine Rich Repeat 563 584 IPR001611 GO:0005515(InterPro)
Cone8ag0188 997 Pfam Leucine Rich Repeat 443 462 IPR001611 GO:0005515(InterPro)
Cone8ag0188 997 Pfam Leucine Rich Repeat 418 440 IPR001611 GO:0005515(InterPro)
Cone8ag0188 997 Pfam Leucine Rich Repeat 251 273 IPR001611 GO:0005515(InterPro)
Cone8ag0188 997 Pfam Leucine Rich Repeat 539 560 IPR001611 GO:0005515(InterPro)
Cone8ag0188 997 SMART LRR_typ_2 152 175 IPR003591 -
Cone8ag0188 997 SMART LRR_typ_2 176 198 IPR003591 -
Cone8ag0188 997 SMART LRR_typ_2 560 584 IPR003591 -
Cone8ag0188 997 SMART LRR_typ_2 297 321 IPR003591 -
Cone8ag0188 997 SMART LRR_typ_2 200 225 IPR003591 -
Cone8ag0188 997 SMART LRR_typ_2 249 273 IPR003591 -
Cone8ag0188 997 SMART LRR_typ_2 440 464 IPR003591 -
Cone8ag0188 997 SUPERFAMILY Protein kinase-like (PK-like) 686 982 IPR011009 -
Cone8ag0188 997 Gene3D Ribonuclease Inhibitor 299 631 IPR032675 -
Cone8ag0188 997 Pfam Protein kinase domain 696 906 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0188 997 FunFam Leucine-rich repeat receptor-like protein kinase 773 997 - -
Cone8ag0188 997 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 384 982 IPR051716 -
Cone8ag0188 997 Gene3D Transferase(Phosphotransferase) domain 1 773 996 - -
Cone8ag0188 997 FunFam Leucine-rich repeat receptor-like protein kinase 35 195 - -
Cone8ag0188 997 Gene3D Ribonuclease Inhibitor 35 191 IPR032675 -
Cone8ag0188 997 SUPERFAMILY L domain-like 402 628 - -
Cone8ag0188 997 FunFam Receptor-like protein kinase HSL1 322 627 - -
Cone8ag0188 997 SUPERFAMILY RNI-like 108 476 - -
Cone8ag0188 997 Gene3D Phosphorylase Kinase; domain 1 668 772 - -
Cone8ag0188 997 Gene3D Ribonuclease Inhibitor 192 293 IPR032675 -
Cone8ag0188 997 ProSiteProfiles Protein kinase domain profile. 694 986 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0188 997 Pfam Leucine rich repeat 155 213 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone8ag0188 Cone-Chr8:982485 Cone9ag0992 Cone-Chr9:5100982 4.19E-91 dispersed
Cone12ag0193 Cone-Chr12:979107 Cone8ag0188 Cone-Chr8:982485 1.03E-267 wgd
Cone4ag1266 Cone-Chr4:10422660 Cone8ag0188 Cone-Chr8:982485 2.67E-67 wgd
Cone6ag1492 Cone-Chr6:11817691 Cone8ag0188 Cone-Chr8:982485 3.41E-176 wgd
Cone8ag0188 Cone-Chr8:982485 Cone9ag1416 Cone-Chr9:10501865 1.98E-134 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83096 PF03168 LEA_2 2.50E-07 CL0159 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0188 - - - 0.0