Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0199 ATGGCAAAATCACCGGAGCGAGTGCACCCGAGAAAGGCGTTTGGATGGGCAGCTAGAGACTCGGCTGGTGTTCTCTCTCCCTTCAATTTCTCTAGAAGGGAAACGGGAGATAAGGATGTGACACTTAAAATTTTGTATTGTGGGATATGTTATTCCGATCTTTGTTTGGCCAAAAACAAGTTGGGTACTTCTATCTACCCTATGGTACCAGGGCATGAAATTGTCGGAGTAGTGAAAGAGGTTGGGAGCAAAGTAGAGAGATTCAAAGTTGGCGACGGAGTTGGTGTGGGGGCCGTAATTGGAGCATGCCATTCATGTGAAAACTGTGCCAACAATCTTGAGGTTTACTGCCCAGAGATGATTCTCACGTGGAATGCAATGTACTACGATGGAACAACCACATATGGCGGCTTCTCTGACTTCATTGTGGTCGATGAACGATTTCTTGTCCACATATCAGACAGCTTGCCACGTGATGCTAGTGCTCCGCTTCTATGCGCTGGAATCACTGTCTATAGCCCTTTACGATATTTCAAACTTGATAAGCCGGGTCTGCATGTGGGTGTAGTTGGCCTTGGTGGTCTTGGCCATATGGCCGTTAAGTTTTGTAAGGCTTTTGGGGTTAAGGTAACTGTTATAAGTACTTCTCCTAACAAGAAGAAGGATGCGTTAGAACACCTCGGGGCCGACTCATTTGTCATCAGCAGTGAGCCAAATCAAATTCAGGCGGCCATGAGCACATTTGATGGAATTATTGATACTGTCTCTGCCAATCACCCACTTTTGCCCTTAATTGGCCTACTGAAACCACATGGAAAGCTCATACTTCTAGGTGCACCAAATGAGCCTCTTGAATTACATGCCCTTCCCCTACTCATTGGGAGAAAAATAGTGGGTGGTAGCTATGTTGGTGGGATGAAAGAGATGCAAGAGATGATTGATTTTGCTGCCAAGCACAACATAACGGCTGATATTGAGCTAATTTCAATGGATTATGTGAACACAGCCATGGAGAGACTCTCTAAAGCTGATGTAAAGTATCGGTTTGTCATCGACATTGGGAACTCATTGAAGTCCGGTTAG 1083 45.34 MAKSPERVHPRKAFGWAARDSAGVLSPFNFSRRETGDKDVTLKILYCGICYSDLCLAKNKLGTSIYPMVPGHEIVGVVKEVGSKVERFKVGDGVGVGAVIGACHSCENCANNLEVYCPEMILTWNAMYYDGTTTYGGFSDFIVVDERFLVHISDSLPRDASAPLLCAGITVYSPLRYFKLDKPGLHVGVVGLGGLGHMAVKFCKAFGVKVTVISTSPNKKKDALEHLGADSFVISSEPNQIQAAMSTFDGIIDTVSANHPLLPLIGLLKPHGKLILLGAPNEPLELHALPLLIGRKIVGGSYVGGMKEMQEMIDFAAKHNITADIELISMDYVNTAMERLSKADVKYRFVIDIGNSLKSG 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1053508 1055612 + Conep08aG0020200.1 Cone8ag0199 442748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0199 360 Gene3D - 167 323 - -
Cone8ag0199 360 PANTHER ALDEHYDE REDUCTASE 5 356 IPR047109 GO:0009809(PANTHER)|GO:0016616(InterPro)|GO:0016616(PANTHER)|GO:0045551(PANTHER)
Cone8ag0199 360 FunFam Uncharacterized protein 16 166 - -
Cone8ag0199 360 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Cone8ag0199 360 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491(InterPro)
Cone8ag0199 360 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Cone8ag0199 360 FunFam Putative cinnamyl alcohol dehydrogenase 6 324 353 - -
Cone8ag0199 360 Pfam Alcohol dehydrogenase GroES-like domain 36 154 IPR013154 -
Cone8ag0199 360 Gene3D - 16 353 - -
Cone8ag0199 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Cone8ag0199 360 SUPERFAMILY GroES-like 20 184 IPR011032 -
Cone8ag0199 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 157 321 IPR036291 -
Cone8ag0199 360 CDD CAD1 14 352 IPR047109 GO:0016616(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0209 Cone-Chr12:1060437 Cone8ag0199 Cone-Chr8:1053508 1.35E-204 dispersed
Cone12ag0210 Cone-Chr12:1068179 Cone8ag0199 Cone-Chr8:1053508 1.28E-139 dispersed
Cone5ag1324 Cone-Chr5:7801793 Cone8ag0199 Cone-Chr8:1053508 1.01E-127 dispersed
Cone5ag1325 Cone-Chr5:7812425 Cone8ag0199 Cone-Chr8:1053508 7.14E-72 dispersed
Cone6ag1515 Cone-Chr6:11964313 Cone8ag0199 Cone-Chr8:1053508 1.38E-25 dispersed
Cone8ag0057 Cone-Chr8:295123 Cone8ag0199 Cone-Chr8:1053508 6.01E-168 dispersed
Cone8ag0199 Cone-Chr8:1053508 Cone8ag0863 Cone-Chr8:8528538 5.20E-138 dispersed
Cone12ag0206 Cone-Chr12:1048994 Cone8ag0199 Cone-Chr8:1053508 1.35E-204 wgd
Cone6ag1514 Cone-Chr6:11963213 Cone8ag0199 Cone-Chr8:1053508 1.15E-32 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0199 K23232 - vvi:100255907 534.643