Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0217 ATGTCTCCTCTGTTTCTGCTCCTTTTCCTACACTTACACTCAACCGTCGCTACTTCCGGTCCACTCCAGATCGATTATTACCAGAAAACATGTCCCGACGCAGAAACCATCGTCAGATATGTCATGAAGAAAGCCTTCATCAGAGAACCTCGCAGTGTCGCCTCCGTCATGCGCTTCCAATTTCACGACTGCTTTGTTAACGGATGCGATGGTTCTATGTTGCTTGATGATACGCCAACCATGCTCGGTGAGAAGCTCTCTCTCTCTAACATCAATTCGCTGCGTTCTTACGAAGTTGTCGATGAAGTTAAGGAGGCGTTGGAGAAGGCCTGCCCTGGAATTGTCTCTTGTGCTGACATCATCATCATGGCATCTAGAGATGCTGTTGCTCTGACAGGAGGGCCGGATTGGAAGGTGAGACTAGGAAGACTAGATAGCCTGACAGCAAGCCAACAAGACTCGGACGACATTATGCCGAGCCCAAGAGCCAACGCTAGCGCTCTAATTCAACTCTTCAGTAAATTCGAACTCTCAATCATAGATCTAGTTGCTCTTTCTGGGTCTCATTCAATTGGAAAGGGCAGGTGTTTCTCCATCATGTTTCGACTATACAATCAATCGGGCTCGGGTAAACCCGACCCAACCATCGAGCCCGCGTTTAGGGAAAAACTGGACCAGCTATGTCCATTGAATGTCGACCAAAATGTGACCGGAGACCTTGATGCTACACCTACAATTTTCGATAACCAGTATTTCAAGGACTTGGTCTACGGCCGAGGGTTTCTTAATTCCGATCAGACACTTTATACGTTTCCACAAACAGCTCCGTTTGTAAAACTGTTTGCCAACAATCAAGGTAAATTTTTCGAGGCTTTTGAGGAAGGGATGTTGAAGATGGGTGACTTGCAGTCCGGACGTGTCGGAGAGGTTAGGAAGAACTGTAGAGTAGTCAATAGTAGGTCTCTCAATATATTAAGAGCTTCTTGA 987 46.61 MSPLFLLLFLHLHSTVATSGPLQIDYYQKTCPDAETIVRYVMKKAFIREPRSVASVMRFQFHDCFVNGCDGSMLLDDTPTMLGEKLSLSNINSLRSYEVVDEVKEALEKACPGIVSCADIIIMASRDAVALTGGPDWKVRLGRLDSLTASQQDSDDIMPSPRANASALIQLFSKFELSIIDLVALSGSHSIGKGRCFSIMFRLYNQSGSGKPDPTIEPAFREKLDQLCPLNVDQNVTGDLDATPTIFDNQYFKDLVYGRGFLNSDQTLYTFPQTAPFVKLFANNQGKFFEAFEEGMLKMGDLQSGRVGEVRKNCRVVNSRSLNILRAS 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1183245 1185045 - Conep08aG0022600.1 Cone8ag0217 442766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0217 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Cone8ag0217 328 FunFam Peroxidase 159 299 - -
Cone8ag0217 328 CDD secretory_peroxidase 22 317 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone8ag0217 328 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0217 328 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0217 328 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0217 328 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0217 328 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0217 328 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0217 328 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0217 328 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0217 328 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0217 328 SUPERFAMILY Heme-dependent peroxidases 22 318 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0217 328 Gene3D Peroxidase, domain 2 159 299 - -
Cone8ag0217 328 PANTHER PEROXIDASE 72-RELATED 10 317 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0217 328 FunFam Peroxidase 25 168 - -
Cone8ag0217 328 ProSiteProfiles Plant heme peroxidase family profile. 21 318 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0217 328 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0217 328 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0217 328 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0217 328 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0217 328 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0217 328 Gene3D - 25 318 - -
Cone8ag0217 328 Pfam Peroxidase 38 284 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone8ag0217 Cone-Chr8:1183245 Cone9ag0507 Cone-Chr9:2423007 7.71E-83 dispersed
Cone8ag0217 Cone-Chr8:1183245 Cone12ag0780 Cone-Chr12:7133940 8.72E-90 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0217 K00430 - cit:102622610 505.368