Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone8ag0260 | ATGAATGATGCAGATGTCTCGAAGCAGATCCAGCAGATGGTGAGGTTCATCCGCCAAGAAGCTGAGGAAAAGGCCAACGAGATCTCCGTCTCTGCTGAAGAAGAGTTCAACATTGAGAAGTTGCAGCTAGTTGAGGCAGAGAAGAAGAAGATCAGGCAGGAGTACGAGAAGAAGGAGAAGCAAGTCGAAGTTCGGAAGAAGATTGAATACTCCATGCAACTTAATGCCTCTCGGATTAAAGTTCTACAAGCTCAGGATGACATCATTAATTCCATGAAAGATGCTACAGCAAAGGAACTTTTGAATGTGAGCCAACAACACCACATATACAAGGAGCTTTTGAAAGATCTGATCATTCAGAGTTTGCTCCGTCTGAAAGAACCCGCTGTCTTGTTGCGCTGCCGTAAAGAAGACGAACATGTGGTGGAGTCTGTGCTGAGCCCAGCAGCTGAGGAATATGCAGAGAAAGCCCAAGTTTACCCACCGGAGATTCTCTTAGACCACACTGTCTATCTTCCACCTGCTCCCAGTCATCACAATGCCCATGGTCCTTCTTGTTCTGGAGGTGTAGTCTTAGCTTCTCGAGATGGGAAGATTGTCTTGGAGAACACACTTGATGCAAGGCTGGATGTTGTGTTTCGTAAAAAACTCCCCGAGGCTTGA | 663 | 46.46 | MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYEKKEKQVEVRKKIEYSMQLNASRIKVLQAQDDIINSMKDATAKELLNVSQQHHIYKELLKDLIIQSLLRLKEPAVLLRCRKEDEHVVESVLSPAAEEYAEKAQVYPPEILLDHTVYLPPAPSHHNAHGPSCSGGVVLASRDGKIVLENTLDARLDVVFRKKLPEA | 220 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 1504354 | 1507405 | + | Conep08aG0027100.1 | Cone8ag0260 | 442809 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone8ag0260 | 220 | SUPERFAMILY | V-type ATPase subunit E-like | 87 | 219 | - | - | |
| Cone8ag0260 | 220 | Pfam | ATP synthase (E/31 kDa) subunit | 16 | 219 | IPR002842 | GO:0033178(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro) | |
| Cone8ag0260 | 220 | PANTHER | ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED | 1 | 219 | IPR002842 | GO:0033178(InterPro)|GO:0046961(InterPro)|GO:0046961(PANTHER)|GO:1902600(InterPro) | |
| Cone8ag0260 | 220 | Gene3D | - | 1 | 62 | - | - | |
| Cone8ag0260 | 220 | Gene3D | - | 92 | 220 | IPR038495 | - | |
| Cone8ag0260 | 220 | Hamap | V-type proton ATPase subunit E [atpE]. | 8 | 220 | IPR002842 | GO:0033178(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro) | |
| Cone8ag0260 | 220 | Coils | Coil | 38 | 61 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone12ag0266 | Cone-Chr12:1413403 | Cone8ag0260 | Cone-Chr8:1504354 | 6.77E-135 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone8ag0260 | K02150 | - | vvi:100246834 | 365.155 |