Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0261 ATGGAATCTGACACCTTGCCTGCCGGTGGTGGGCTCAGCGGAGGATCAGCTCCGGATCCAGATTTCTCCTTCGCCTTCAACGACAGGAACTTCTCCGATCGTGTTTTGAGGATTGAGATCATTTCGGGTTCTCCAGAGGACAAATCGGACGGTGAAGGTTGCAACAGTGTGTCTGATTGGGCTCGTAACAGGAAGAGAAGAAGAGAGGACAACAATAAGAAAGAGAGTGCCGTGGATGTTGTTTTGAACTGTGCGGAGCAGATTCCCAATTGTAATATGCCAGATACAGAGGATGGTGGGGCCTATGAAACTCAAGATGAGGATGCTGATGCAATGATTGAAGAATCACATTCAGGGGACGAAGGTGATGAGGCTGGTCATGGCCATGATTCATTACGAAGCATGGATTGCTCAACAGTTATCGAAGTCAAAACCATACACATTAGCTCTCCAATTCTAGCAGTAAAGAGTCCATTTTTTTATAAGTTGTTTTCAAATGGTATGAGGGAATCAGAGCAGCGTCATGTGACTCTGCGAATTCATGAATCTGAAGAAGCAGCTCTTATGGAACTCATGAACTTTATGTATAGTAATATGTTGTCCACAACCACTCCTACTGCTTTATTGGATGTGCTAATGGCAGCCGATAAGTTTGAGGTTGCTTCATGCATGAGGTATTGCAGTAGGTTAATGCTTAGCTTGCCTATGACTTGCGAATCTGCCTTGCTCTACTTGGACCTTCCTTCTAGCATTTCAATGGCTGATGCTGTTCAACCATTGACTGAAGCAGCAAAGTCATTCCTTGCTGCTCAGTACAAAGACATAACAAGGTTTCATGAAGAGGTAATGAACTTGCCTCTAGCCGGTATTGAAGCTGTCCTATCAAGTGATGATCTTCAGATTGCTTCAGAAGATGCTGTTTTTGACTTTGTCCTCAGGTGGGCCCGGACCCATTGTCCCAAACTAGAGGACCGAAGAGACATTCTTGGCTCACACCTCGGACGGCACATCCGTTTCCCCTTCATGAGTTGTAGAAAGCTAAAGAAAATCCTAACCTGCAATGACTTTGACCCGGAACTTGCATCAAAAGTTGTTCTGGAAGCTCTGTTTTTCAAAGCGGAGGCTCCATATAGGCAAAGGTCCCTTGCTATAGAAGAAGCCAACGTGACCCACCGCCGGTTTGTAGAACGGGCCTACAAGTACCGGCCAGTTAAGGTGGTCGAATTCGAGACGCTGCGACAGCAGTGCATTGTCTACCTGGACCTCAAGCGGGAAGAGTGCATACAGCTTTTTCCAGCTGGCCGGGTTTACTCCCAGGCCTTTCACTTGGGCGGACAGGGCTTCTTCTTGTCGGCCCATTGCAACATGGACCAACAAAATACCTTCAATTGTTTCGGGTTGTTTTTGGGGATGCAAGAGAAAGGCTCCGTTTCTTTTGCAATTGATTATGAATTTGCAGCTAGGCTGAAACCTAGTGAGGAGTATGAAAGGAAGTATAAAGGGAGCTATACTTTTACCGGAGGCAAGGCTGTCGGGTATAGGAATTTGTTCAATATTGCCTGGACGGCTTTCATGGCAGACGATAGCATTTACTTTATTAACGACACCCTTCATCTAAGAGCTGAGTTAACTATCAAACAATAA 1644 45.8 MESDTLPAGGGLSGGSAPDPDFSFAFNDRNFSDRVLRIEIISGSPEDKSDGEGCNSVSDWARNRKRRREDNNKKESAVDVVLNCAEQIPNCNMPDTEDGGAYETQDEDADAMIEESHSGDEGDEAGHGHDSLRSMDCSTVIEVKTIHISSPILAVKSPFFYKLFSNGMRESEQRHVTLRIHESEEAALMELMNFMYSNMLSTTTPTALLDVLMAADKFEVASCMRYCSRLMLSLPMTCESALLYLDLPSSISMADAVQPLTEAAKSFLAAQYKDITRFHEEVMNLPLAGIEAVLSSDDLQIASEDAVFDFVLRWARTHCPKLEDRRDILGSHLGRHIRFPFMSCRKLKKILTCNDFDPELASKVVLEALFFKAEAPYRQRSLAIEEANVTHRRFVERAYKYRPVKVVEFETLRQQCIVYLDLKREECIQLFPAGRVYSQAFHLGGQGFFLSAHCNMDQQNTFNCFGLFLGMQEKGSVSFAIDYEFAARLKPSEEYERKYKGSYTFTGGKAVGYRNLFNIAWTAFMADDSIYFINDTLHLRAELTIKQ 547
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1507694 1511550 + Conep08aG0027200.1 Cone8ag0261 442810

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0261 547 PANTHER OS02G0260700 PROTEIN 17 547 IPR045890 GO:0005634(PANTHER)|GO:0010114(PANTHER)
Cone8ag0261 547 MobiDBLite consensus disorder prediction 1 26 - -
Cone8ag0261 547 Gene3D Potassium Channel Kv1.1; Chain A 124 268 IPR011333 -
Cone8ag0261 547 FunFam BTB/POZ domain-containing protein POB1 269 373 - -
Cone8ag0261 547 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 406 546 IPR008974 GO:0005515(InterPro)
Cone8ag0261 547 SUPERFAMILY POZ domain 136 232 IPR011333 -
Cone8ag0261 547 SMART BACK_2 250 352 IPR011705 -
Cone8ag0261 547 MobiDBLite consensus disorder prediction 59 76 - -
Cone8ag0261 547 Pfam BTB/POZ domain 135 231 IPR000210 GO:0005515(InterPro)
Cone8ag0261 547 MobiDBLite consensus disorder prediction 42 76 - -
Cone8ag0261 547 CDD BTB_POZ_ZBTB_KLHL-like 136 218 - -
Cone8ag0261 547 SUPERFAMILY TRAF domain-like 434 545 - -
Cone8ag0261 547 Gene3D - 269 373 - -
Cone8ag0261 547 FunFam BTB/POZ domain-containing protein POB1 130 268 - -
Cone8ag0261 547 ProSiteProfiles BTB domain profile. 135 204 IPR000210 GO:0005515(InterPro)
Cone8ag0261 547 SMART BTB_4 135 235 IPR000210 GO:0005515(InterPro)
Cone8ag0261 547 Pfam BTB And C-terminal Kelch 257 350 IPR011705 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0261 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0469 Cone-Chr11:2359212 Cone8ag0261 Cone-Chr8:1507694 5.37E-281 dispersed
Cone18ag1042 Cone-Chr18:7667998 Cone8ag0261 Cone-Chr8:1507694 3.73E-279 dispersed
Cone12ag0267 Cone-Chr12:1417629 Cone8ag0261 Cone-Chr8:1507694 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g83 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone8ag0261 Cone12ag0267 . . . . . . . . . . . . . . . . . Cma06g01039 . Car06g00872 . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0029911 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2