Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0281 ATGGCTTTCAGAGAATCGAGCTCTGCTGCTGTACCAGAGAGTAAAATCAAAGGGCTTCTAACTCATGGTGGTCGGTATGTTCAGTACAATGTTTATGGTAGCTTGTTCGAGGTTACGTCTAAGTATGTGCCTCCTATTCGTCCAATCGGCAGGGGTGCTTATGGCCTCGTTTGTGCTGCTGTAAATTCCGACACCAACGAGGAGGTTGCCATAAAGAAAATCGGCAATACATTTGACAACAGAATCGACGCCAAACGGACCTTAAGAGAAATTAAGCTTCTTCTCCATATGAACCATGGAAATGTTATTGCCATTAAGGACATTATACGACCCCCACAAAAAGATGCCTTCAATGATGTGTATATTGTCTATGAATTGATGGACACTGATCTTCATCAGATCATTCGTTCGCGACAATCCCTCACAGATAATCATTGTCAGTATTTTTTGTATCAGTTATTGAGGGGGCTAAGGTACATACACTCTGCAAAGGTCTTGCACCGTGATCTTAAGCCAAGCAACCTTCTTCTGAATGGAGATTGTGACCTGAAAATCGGAGACTTCGGTCTGGCAAGGACTACTTCTGAAACTGATTTCATGACAGAGTATGTGGTTACACGTTGGTACCGGGCCCCGGAGTTACTTCTTAATTGCTCCGAATACACGGCAGCTATTGATGTTTGGTCTGTTGGTTGTATTCTTGGGGAGATAGTGACTAGGGAGCCATTGTTCCCGGGTAAAGATTACGTTCATCAGCTTAGGCTTATAACTGAGTTACTAGGTTCGCCGGATGATGCTAGCCTCGGATTTCTCAGAAGCGACAATGCTAGAAGATATGTCAAACAACTTCCACAATTCCTGAAGCAGAACTTTTCCTCTAGATTTCCTAACATGTCGCCTGGAGCCCTTGATCTTCTAGAGAAAATGCTCGTCTTTGATCCTCACAAACGAATAACAGTAGAGGAAGCACTTTGTCATCCATACTTATCAACTCTGCATGATATCAATGACGAGCCAGTCTGTTCCGCTCCTTTCAGTTTCGACTTTGAGCAACCGTCGTGTACCGAAGAGCACATTAAAGAACTCATCTGGAGAGAGTCGGTCAAGTTCAATCCTGAGTCGATCCATTAG 1131 43.85 MAFRESSSAAVPESKIKGLLTHGGRYVQYNVYGSLFEVTSKYVPPIRPIGRGAYGLVCAAVNSDTNEEVAIKKIGNTFDNRIDAKRTLREIKLLLHMNHGNVIAIKDIIRPPQKDAFNDVYIVYELMDTDLHQIIRSRQSLTDNHCQYFLYQLLRGLRYIHSAKVLHRDLKPSNLLLNGDCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDVWSVGCILGEIVTREPLFPGKDYVHQLRLITELLGSPDDASLGFLRSDNARRYVKQLPQFLKQNFSSRFPNMSPGALDLLEKMLVFDPHKRITVEEALCHPYLSTLHDINDEPVCSAPFSFDFEQPSCTEEHIKELIWRESVKFNPESIH 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1625057 1628182 + Conep08aG0029600.1 Cone8ag0281 442830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0281 376 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 36 365 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cone8ag0281 376 SMART serkin_6 43 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0281 376 Gene3D Phosphorylase Kinase; domain 1 26 366 - -
Cone8ag0281 376 FunFam Mitogen-activated protein kinase 127 356 - -
Cone8ag0281 376 SUPERFAMILY Protein kinase-like (PK-like) 46 337 IPR011009 -
Cone8ag0281 376 Pfam Protein kinase domain 47 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0281 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag0281 376 ProSitePatterns MAP kinase signature. 78 181 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0281 376 ProSiteProfiles Protein kinase domain profile. 43 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0281 376 CDD STKc_TEY_MAPK 36 372 - -
Cone8ag0281 376 FunFam Mitogen-activated protein kinase 28 137 - -
Cone8ag0281 376 ProSitePatterns Protein kinases ATP-binding region signature. 49 73 IPR017441 GO:0005524(InterPro)
Cone8ag0281 376 Gene3D Transferase(Phosphotransferase) domain 1 127 356 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag0309 Cone-Chr18:1516153 Cone8ag0281 Cone-Chr8:1625057 2.52E-212 dispersed
Cone7ag1843 Cone-Chr7:11965721 Cone8ag0281 Cone-Chr8:1625057 1.39E-143 dispersed
Cone8ag0281 Cone-Chr8:1625057 Cone8ag0764 Cone-Chr8:7689117 1.91E-202 dispersed
Cone12ag0287 Cone-Chr12:1551932 Cone8ag0281 Cone-Chr8:1625057 2.20E-227 wgd
Cone14ag0377 Cone-Chr14:1764585 Cone8ag0281 Cone-Chr8:1625057 1.77E-231 wgd
Cone15ag0414 Cone-Chr15:1946029 Cone8ag0281 Cone-Chr8:1625057 2.38E-149 wgd
Cone6ag0803 Cone-Chr6:4083500 Cone8ag0281 Cone-Chr8:1625057 5.47E-242 wgd
Cone8ag0281 Cone-Chr8:1625057 Cone9ag0801 Cone-Chr9:3846444 2.43E-245 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83103 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0281 K20600 - csv:101214254 682.945