Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone8ag0297 | ATGTCGCGGTCGTTAAGTGGTCCACGTGTCTGGCCTCTACTGGGTAGTCTTCCCGGGCTTATAAAAAATGCTAATCGATTGCATGATTGGATCAGAGAGAACCTCAGCCAGTGTGGAGGCACGTACCAGACCTGCACGTGCGCTGTTCCCTCTCTAGCACGCAAGCAGGGTCTCGTGACTGTCACGTGCGATCCGAAGAACTTGGAGCACATTTTGAAGCTCCGGTTTGATAATTACCCCAAGGGACCCAATTGGCAGGGTGTGTTCCATGATTTGTTGGGTGATGGCATCTTCAACTCGGATGGTGACACGTGGCTGTTCCAAAGGAAAACGGCTGCGCTTGAATTCACCACTAGGACACTCCGTCAAGCCATGGCTCGATGGGTTAGCCGGTCAATTAAGCTTAGGTTCTGCCCGATTCTCGAAACGGCTCAACGGGAAGCTAAGCCGGTCGATCTTCAAGACCTATTGCTTCGGCTCACGTTTGACAATATATGTGGGTTAGCCTTCGGTAAAGACCCTGAAACTCTTTCTCCGGGGCTGCCGGAAAACGGCTTCGCTCTGGCTTTTGACCGAGCCACTGAAGCCTCGTTGCGGCGAATGATCATGCCTAATGTTATATGGAAGATCAAGAAATGGCTCCGGCTCGGGATGGAAGTCAGCTTAGTCCATAGCCTTGAACATATTGATAAGTACATGGCGGATATCATCGAGACGCGGAAAATCGAGTTGTTGGGCCGACAAGAAGCCGAAAACGGGAACCCACATGATGACTTGTTGTCTAGGTTCATGAAGAAAAAGGAATCCTACTCGAACACTTTCCTACAACACGTGGCGCTCAACTTCATCCTAGCTGGACGTGACACGTCATCCGTAGCACTGAGCTGGTTCTTCTGGTTGGTCAGTATAAATCCGACAGTAGAAGAAAAATTATTAATCGAATTATGCTCCGTCTTGATGGAGACACGTGGCGATGACCAATCAAAATGGGTGGAAGAGTCCTTGGAGTTTGAAGAAATTGACCGCTTGATATACCTCAAGGCTGCATTATCTGAGACACTTAGGCTATACCCTTCAGTGCCTGAAGACTCGAAGCACGTAATAGACGACGACGTTTTGCCAAGTGGGGCCGTGGTGCCAGCTGGTTCATCCATCACGTATTCAATCTACTCAACGGGTAGGATGAAGTATATATGGGGAGAAGATTGTTTGGAATTCAAGCCGGAAAGATGGTTGTCGCCAGACGGTAAGAAATTCGAGATGCATGATTCGTACAAGTTTGTGGCGTTTAATGCCGGTCCGAGAATCTGCTTAGGAAAGGACTTGGCTTATATACAGATGAAGTCGATAGCAGCATCGGTGCTTCTACGGCACCGACTTACTGTTGCTCAGGGTCACCGGGTCGAGCAGAAGATGTCCTTGACATTGTTCATGAAGTATGGTCTCAAGGTTGATGTGCACCCAAGGGACTTAAAGAACGTGGTGGAGAAGATAAGGAAGAGTGGGATAGTCATAAAAATATAG | 1524 | 48.62 | MSRSLSGPRVWPLLGSLPGLIKNANRLHDWIRENLSQCGGTYQTCTCAVPSLARKQGLVTVTCDPKNLEHILKLRFDNYPKGPNWQGVFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRSIKLRFCPILETAQREAKPVDLQDLLLRLTFDNICGLAFGKDPETLSPGLPENGFALAFDRATEASLRRMIMPNVIWKIKKWLRLGMEVSLVHSLEHIDKYMADIIETRKIELLGRQEAENGNPHDDLLSRFMKKKESYSNTFLQHVALNFILAGRDTSSVALSWFFWLVSINPTVEEKLLIELCSVLMETRGDDQSKWVEESLEFEEIDRLIYLKAALSETLRLYPSVPEDSKHVIDDDVLPSGAVVPAGSSITYSIYSTGRMKYIWGEDCLEFKPERWLSPDGKKFEMHDSYKFVAFNAGPRICLGKDLAYIQMKSIAASVLLRHRLTVAQGHRVEQKMSLTLFMKYGLKVDVHPRDLKNVVEKIRKSGIVIKI | 507 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 1714016 | 1715539 | + | Conep08aG0031200.1 | Cone8ag0297 | 442846 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone8ag0297 | 507 | CDD | CYP86A | 45 | 482 | - | - | |
| Cone8ag0297 | 507 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 430 | 439 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone8ag0297 | 507 | PANTHER | CYTOCHROME P450 | 8 | 482 | - | - | |
| Cone8ag0297 | 507 | Gene3D | Cytochrome P450 | 2 | 489 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone8ag0297 | 507 | PRINTS | E-class P450 group I signature | 294 | 320 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone8ag0297 | 507 | PRINTS | E-class P450 group I signature | 274 | 291 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone8ag0297 | 507 | PRINTS | E-class P450 group I signature | 427 | 437 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone8ag0297 | 507 | PRINTS | E-class P450 group I signature | 347 | 365 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone8ag0297 | 507 | PRINTS | E-class P450 group I signature | 437 | 460 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone8ag0297 | 507 | FunFam | Cytochrome P450 | 1 | 492 | - | - | |
| Cone8ag0297 | 507 | Pfam | Cytochrome P450 | 6 | 476 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone8ag0297 | 507 | SUPERFAMILY | Cytochrome P450 | 7 | 489 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone8ag0297 | 507 | PRINTS | P450 superfamily signature | 437 | 448 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone8ag0297 | 507 | PRINTS | P450 superfamily signature | 348 | 359 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone8ag0297 | 507 | PRINTS | P450 superfamily signature | 285 | 302 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone8ag0297 | 507 | PRINTS | P450 superfamily signature | 428 | 437 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone1ag0585 | Cone-Chr1:5854590 | Cone8ag0297 | Cone-Chr8:1714016 | 1.87E-235 | dispersed | |
| Cone4ag1015 | Cone-Chr4:8861130 | Cone8ag0297 | Cone-Chr8:1714016 | 2.88E-231 | dispersed | |
| Cone5ag1095 | Cone-Chr5:4872207 | Cone8ag0297 | Cone-Chr8:1714016 | 5.33E-235 | dispersed | |
| Cone6ag0571 | Cone-Chr6:2796642 | Cone8ag0297 | Cone-Chr8:1714016 | 9.04E-118 | dispersed | |
| Cone7ag1015 | Cone-Chr7:7851846 | Cone8ag0297 | Cone-Chr8:1714016 | 3.10E-92 | dispersed | |
| Cone8ag0297 | Cone-Chr8:1714016 | Cone9ag1270 | Cone-Chr9:9492468 | 1.64E-99 | dispersed | |
| Cone12ag0301 | Cone-Chr12:1644993 | Cone8ag0297 | Cone-Chr8:1714016 | 0 | wgd | |
| Cone14ag0365 | Cone-Chr14:1691857 | Cone8ag0297 | Cone-Chr8:1714016 | 1.60E-279 | wgd | |
| Cone15ag0402 | Cone-Chr15:1882916 | Cone8ag0297 | Cone-Chr8:1714016 | 7.12E-282 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone8ag0297 | K15398 | - | vvi:100247907 | 845.499 |