Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0327 ATGGAAAGCTCAAGCACGGAAAAGTTGTGGGCAGGTCAGTTTCCTTTTAAGAAGAAATCGGGTGAAATATTCATGGCACTAGTGACCAAAAGCCCCTTATACGAGGACAATGAAGTTTCTCGAATTATCCTTGTTTCTAGCGATGCAGCATTGTTTAATAGCATTAATTCAGAAAATCAGAGAAGAGATCAAGATAATGGCGAAAATCGACCTAAATTACGGGGTTTAGATTTGAAAAGAATCCAATGGAACTCAAGACCGCCAGTTGCACCAGTTCCACACAACTTTGCATCTTCTGTTTCTAATCTGGCCTCAAAACTTGGATTGAGGAGAGAAGCAGAAGATTCATGTTGTTCAAGCGCTAAATTCCAGGACAGTGAAGATGCAGAGTCGGAGAAACCTGGGAAATTAGGAATAAAGGTCTTCTCAAAGATTCATATTCGGGATATTGGCGAGAATGGAAGAAAAAATGGAGATACGCAAAAGGATGGTGCAAGTAAGGCTTTACTGCAAAAGAATGAAGATACTTCACAACTTCAATCTACTTCAGAGAAATGCAATGAGTGTTACAAAACAGAGACTGAAGCACAAAGACAGCAAGATTCTAAGCAGTGTCCAAGTTCAGGCGGGAGCATCAATAGCCAGGGAAATTCATCAATTAAAGGAGATAATGAGTCAAAATCAATTGTAGATTGTGAGATACGATGGGAAGATCTGCACTTAGGGGAGGAGATTGGACAAGGTTCTTATGCCGTTGTTTATCACGGAATTTGGAACGGATCGGATGTTGCCGTTAAGGTTTACTTTGCAAACGAGTACAAAGAGGGGGTTTTAAATGACTACAAGAAGGAGATTGATATAATGAAGAGGTTGAGACATCCTAATGTATTGCTGTTTATGGGAGCAGTTTACTCACAGGAAAGGCTTGCCATCGTCACGGAGTTCCTGCCTAGGGGAAGCCTGTTCAAAACGCTTCACAAGAACAATCAGACATTAGATATTAGACGGCGTCTAAGAATGGCCCTTGATGCTGCCAGAGGAATGAATTATTTGCATCGAATGAATCCACCCATAATACATAGGGACCTTAAATCATCTAATCTTCTTGTTGATAGAAACTGGAGTGTCAAGGTTGGTGACTTTGGCCTATCGAGATTGAAGAATGCAACTTTGTTAACGGCAAAATCTGGCAGAGGAACACCTCAGTGGATGGCTCCTGAAATTCTTCGCAATGAACCTTCAAATGAAAAGTCTGATGTATACAGTTTTGGTGTCATTTTATGGGAACTAGTGACTGTATCCATCCCTTGGAAGAACCTCAATTCCCTACAGGTAGTTGGAGTTGTGGGTTTCATGGATAGAAGATTAGAGCTACCAGAAGACCTTGATCCTCAACTGGCATCCATAATCCAAGACTGTTGGCAAAGTGACCCGGATAAACGGCCCTCATTTGAAGATCTAATTCGGAGAATGACAAGCCTGGTTCAGAAATTTTCCACAATGCCATCCAGAAACAGCTCATAG 1524 41.4 MESSSTEKLWAGQFPFKKKSGEIFMALVTKSPLYEDNEVSRIILVSSDAALFNSINSENQRRDQDNGENRPKLRGLDLKRIQWNSRPPVAPVPHNFASSVSNLASKLGLRREAEDSCCSSAKFQDSEDAESEKPGKLGIKVFSKIHIRDIGENGRKNGDTQKDGASKALLQKNEDTSQLQSTSEKCNECYKTETEAQRQQDSKQCPSSGGSINSQGNSSIKGDNESKSIVDCEIRWEDLHLGEEIGQGSYAVVYHGIWNGSDVAVKVYFANEYKEGVLNDYKKEIDIMKRLRHPNVLLFMGAVYSQERLAIVTEFLPRGSLFKTLHKNNQTLDIRRRLRMALDAARGMNYLHRMNPPIIHRDLKSSNLLVDRNWSVKVGDFGLSRLKNATLLTAKSGRGTPQWMAPEILRNEPSNEKSDVYSFGVILWELVTVSIPWKNLNSLQVVGVVGFMDRRLELPEDLDPQLASIIQDCWQSDPDKRPSFEDLIRRMTSLVQKFSTMPSRNSS 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1876727 1881528 - Conep08aG0034200.1 Cone8ag0327 442876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0327 507 Gene3D Transferase(Phosphotransferase) domain 1 318 504 - -
Cone8ag0327 507 FunFam Serine/threonine-protein kinase isoform 1 230 317 - -
Cone8ag0327 507 SMART serkin_6 239 495 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0327 507 PANTHER SERINE-THREONINE PROTEIN KINASE 102 493 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cone8ag0327 507 SUPERFAMILY Protein kinase-like (PK-like) 228 497 IPR011009 -
Cone8ag0327 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 358 370 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag0327 507 PRINTS Tyrosine kinase catalytic domain signature 462 484 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag0327 507 PRINTS Tyrosine kinase catalytic domain signature 352 370 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag0327 507 PRINTS Tyrosine kinase catalytic domain signature 313 326 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag0327 507 PRINTS Tyrosine kinase catalytic domain signature 399 409 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag0327 507 PRINTS Tyrosine kinase catalytic domain signature 418 440 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag0327 507 MobiDBLite consensus disorder prediction 199 224 - -
Cone8ag0327 507 Pfam Protein tyrosine and serine/threonine kinase 239 490 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag0327 507 CDD STKc_MAP3K-like 245 491 - -
Cone8ag0327 507 Gene3D Phosphorylase Kinase; domain 1 232 316 - -
Cone8ag0327 507 ProSitePatterns Protein kinases ATP-binding region signature. 245 266 IPR017441 GO:0005524(InterPro)
Cone8ag0327 507 FunFam PAS domain-containing protein tyrosine kinase family protein 317 506 - -
Cone8ag0327 507 MobiDBLite consensus disorder prediction 197 224 - -
Cone8ag0327 507 ProSiteProfiles Protein kinase domain profile. 239 494 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0728 Cone-Chr15:4150184 Cone8ag0327 Cone-Chr8:1876727 7.91E-128 dispersed
Cone7ag0573 Cone-Chr7:2753867 Cone8ag0327 Cone-Chr8:1876727 2.41E-49 dispersed
Cone7ag1292 Cone-Chr7:9521345 Cone8ag0327 Cone-Chr8:1876727 1.18E-106 dispersed
Cone8ag0327 Cone-Chr8:1876727 Cone8ag1535 Cone-Chr8:11531445 7.45E-67 dispersed
Cone8ag0327 Cone-Chr8:1876727 Cone14ag0716 Cone-Chr14:3916480 2.47E-131 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83106 PF10539 Dev_Cell_Death 4.90E-19 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0327 - - - 0.0