Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0328 ATGTTGGCTGGGTGTTCTAGTTCAACATTGCTGTCACCGAGGCATAGAGTAAGGAGTGAATCATCAGCATCTTGCCATTTCCAATTACCATCTTCAATGAGCACACAAAGACTAGACTTACCACCATGTACTAGTACTACTTTCCCCCGAAAAGAGGCCTCATCCCGTTCACAGCAGCAGCCCATTAGGCCCGTGGGCCTTCCGGAATCCACCAAGTCCGCCGCCGCCACTTGTTCTCTCAAGCAGAACATCCGTCTCCCACCTCTAGCCGTGAGAGGGGCCCATGTCATCGACAATAACGTCAACAATAGGAGCTTGAAGCGATTTGCAGAAGAAGACGAGGGTTGTTGTCTTAACAAGAGAGTGAAGAGAAAACAAAATGAAGAAGATAGCTTGAGTTTGGGCAGATTTAGTGAGAGGAATTTTTGGTTTCTTACTGGGTTAGATGTGCCTCATCAGATTCCTCCCTTTTCGGGGATAACAGATTTCGGGGAGAAAGAAGGAGGAGGAGAAACTAGCAGCCATGGACAAGGGAAAAGGGAGTTTTCAGGTTCTATCACTACTACTACTACAGAAAACCAGAGTTTGGCTGAAGTCGGAAATGGGATCGGACCCGGACCCGGACCAGGAACCGGGCCTAGGCCTTTTGGGGTCCCATACTTGCATCAAGGTGGAGAAGAAGAGGACAAGAACCATCAAGGAGAGGAACGGGATTTCGAGCTTGTTAGCTTACTTACAGCATGTGTGGAAGCAATCGGATCGAAAAACATTGCATTGATCAATCATTTTATCCAAAAACTAGGTGGTCTTGCTTCTCCGACAAAAGGGTCTCCGCTAACCCGCCTTATCGCTTACTATACGGAAGCCTTGGCTCTAAGAGTGACCCGTCTTTGGCCCCACTTTTTCCACATAACAACTCCTCGGGAACTTGACCGTTTAGAGAATGAAGATCCCGGCATGCCGTTTCGCCTTCTGAATCAGGTAACTCCAATCCCGAAATTCATTCATTTCACTTCTAACGAGATTTTGCTTAAAACATTTGAAGGGAAAGATAGGGTCCACGTCATAGATTTCGGGATCGAGCAAGGTCTGCAATGGCCTAGCTTTTTCCAAACTCTAGCTTCTAGACCAAACCCTCCAAGCCATGTTCGGATCACGGGTGTAGGCGAGTCAAAGCAAGAGTTGGCCGAGACTGGAGAGAGACTAGCCGGATTCGCCCAGGCGTTGAACCTTCCATTCGAGTTCCACCCAGTCGTGGACCGTTTAGAAGACGTCCGATTATGGATGCTCCATGTCAAGGAGCAAGAGAGTGTTGCTATAAACTGCAGTAGCCAACTTCACAAGGTATTATACGATTCATTGGGAGGAGGGTTGAGGGATTTTCTGGGGCTCATTGGAAGCACGAATCCGATGGTTATGGTTGTAGCGGAGCAAGAAGGGGAACATAACGATCCAAGATTATCCGTTCGGATTTCAAATTCATTGAAGTACTATTCGGCTTTGTTCGATTCCATCGACTCCTCGAGCTTGGGGCCAGATAGCCAGGTGAGGGTCAAGATTGAGGAGATGTTTGCTCGGGAGGTTCGAAACATTGTTGCTTGTGAAGGAAGCGACCGGGTTGAAAGGCATGAGGGGTTCGCAAAATGGAAGAGCATGTTGTTGGAGCAAGGAGGGTTCAAGTGTACAAGGGTTGGAGATAGAGAGTTGATCCAGAGCCAATTGCTTCTGAAGATGTATTCTTGTGATAGTTATAACGTGAAAAGGAAAGGTGGAGAAGAAGGAAATGGAGGAGCAGAAGGCATCACTTTAAGTTGGGAAGATCAGAGTCTTTATACAATTTCGGCTTGGGTACCTACTGATGATGTTACAGGCGGTTCGGGTTGA 1884 47.56 MLAGCSSSTLLSPRHRVRSESSASCHFQLPSSMSTQRLDLPPCTSTTFPRKEASSRSQQQPIRPVGLPESTKSAAATCSLKQNIRLPPLAVRGAHVIDNNVNNRSLKRFAEEDEGCCLNKRVKRKQNEEDSLSLGRFSERNFWFLTGLDVPHQIPPFSGITDFGEKEGGGETSSHGQGKREFSGSITTTTTENQSLAEVGNGIGPGPGPGTGPRPFGVPYLHQGGEEEDKNHQGEERDFELVSLLTACVEAIGSKNIALINHFIQKLGGLASPTKGSPLTRLIAYYTEALALRVTRLWPHFFHITTPRELDRLENEDPGMPFRLLNQVTPIPKFIHFTSNEILLKTFEGKDRVHVIDFGIEQGLQWPSFFQTLASRPNPPSHVRITGVGESKQELAETGERLAGFAQALNLPFEFHPVVDRLEDVRLWMLHVKEQESVAINCSSQLHKVLYDSLGGGLRDFLGLIGSTNPMVMVVAEQEGEHNDPRLSVRISNSLKYYSALFDSIDSSSLGPDSQVRVKIEEMFAREVRNIVACEGSDRVERHEGFAKWKSMLLEQGGFKCTRVGDRELIQSQLLLKMYSCDSYNVKRKGGEEGNGGAEGITLSWEDQSLYTISAWVPTDDVTGGSG 627
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1888603 1890486 + Conep08aG0034300.1 Cone8ag0328 442877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0328 627 MobiDBLite consensus disorder prediction 36 70 - -
Cone8ag0328 627 MobiDBLite consensus disorder prediction 202 233 - -
Cone8ag0328 627 ProSiteProfiles GRAS family profile. 232 617 IPR005202 -
Cone8ag0328 627 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 225 616 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cone8ag0328 627 MobiDBLite consensus disorder prediction 163 186 - -
Cone8ag0328 627 Pfam GRAS domain family 241 616 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone8ag0328 Cone-Chr8:1888603 Cone9ag0417 Cone-Chr9:1924848 2.36E-60 dispersed
Cone12ag0327 Cone-Chr12:1785769 Cone8ag0328 Cone-Chr8:1888603 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46641 PF00462 Glutaredoxin 2.30E-12 CL0172 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0328 K27749 - mdm:103433022 691.034